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{ "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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}, "transcripts": [ { "gene_id": "IAG000037", "transcript_id": "IAT000037", "gene_name": "HLA-S", "consensus": "HLA-S*01:04", "alleles": "HLA-S*01:04", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000060", "gene": "MICA", "contig": "HG00423#1#CM089400.1", "start": 31345697, "end": 31358419, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000060", "template_allele": "MICA*010:01:05", "gene_name": "MICA" }, "transcripts": [ { "gene_id": "IAG000060", "transcript_id": "IAT000060", "gene_name": "MICA", "consensus": "MICA*010:01:05", "alleles": "MICA*010:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG00423#1#CM089400.1", "start": 31440660, "end": 31453309, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*005:02:21", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*005:02:21", "alleles": "MICB*005:02:21", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "HG00423#1#CM089400.1", "start": 31924780, "end": 31945402, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BS", "contig": "HG00423#1#CM089400.1", "start": 31957516, "end": 31971766, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BS" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG00423#1#CM089400.1", "start": 32374913, "end": 32380623, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:12", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:12", "alleles": "HLA-DRA*01:01:01:12", "template_warning": "NA" } ] }, { "gene_id": "IAG000020", "gene": "HLA-DRB4", "contig": "HG00423#1#CM089400.1", "start": 32470956, "end": 32486423, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000020", "template_allele": "HLA-DRB4*01:03:01:08", "gene_name": "HLA-DRB4" }, "transcripts": [ { "gene_id": "IAG000020", "transcript_id": "IAT000020", "gene_name": "HLA-DRB4", "consensus": "HLA-DRB4*01:03:01:08", "alleles": "HLA-DRB4*01:03:01:08", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG00423#1#CM089400.1", "start": 32599545, "end": 32614939, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*09:01:02:03", "gene_name": "HLA-DRB1" }, 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"IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:07", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:07", "alleles": "HLA-DQB2*01:01:01:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG00423#1#CM089400.1", "start": 32834743, "end": 32839528, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:09", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:09", "alleles": "HLA-DOB*01:01:01:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG00423#1#CM089400.1", "start": 32850999, "end": 32860633, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:05:01:09", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:05:01:new", "alleles": "TAP2*01:05:01:01,TAP2*01:05:01:02,TAP2*01:05:01:03,TAP2*01:05:01:04,TAP2*01:05:01:05,TAP2*01:05:01:06,TAP2*01:05:01:07,TAP2*01:05:01:08,TAP2*01:05:01:09,TAP2*01:05:01:10,TAP2*01:05:01:11,TAP2*01:05:01:12,TAP2*01:05:01:13,TAP2*01:05:01:14", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG00423#1#CM089400.1", "start": 32867187, "end": 32876466, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:01:01:01", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*03:01:00:new", "alleles": "TAP1*03:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": 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{ "gene_id": "IAG000011", "template_allele": "HLA-DPB2*01:01:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*01:01:02", "alleles": "HLA-DPB2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG00423#1#CM089409.1", "start": 57740242, "end": 57752598, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*00902", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00902new", "alleles": "KIR3DL3*00902", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG00423#1#CM089409.1", "start": 57754241, "end": 57769003, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010101", "gene_name": 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"gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG00423#1#CM089409.1", "start": 57802038, "end": 57806277, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0100102", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*01001new", "alleles": "KIR3DP1*0100101,KIR3DP1*0100102", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG00423#1#CM089409.1", "start": 57819335, "end": 57830471, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0060201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0060201", "alleles": "KIR2DL4*0060201", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": 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"KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG00597#1#CM085776.1", "start": 58308470, "end": 58323210, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030207", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG00597#1#CM085776.1", "start": 58324975, "end": 58329214, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0100102", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0100102", "alleles": "KIR3DP1*0100102", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG00597#1#CM085776.1", "start": 58342271, "end": 58353413, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "HG00597#1#CM085776.1", "start": 58354918, "end": 58369880, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130108", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*0130108", "alleles": "KIR3DS1*0130108", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000047", "gene": "KIR2DL5A", "contig": "HG00597#1#CM085776.1", "start": 58371768, "end": 58381446, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000047", "template_allele": "KIR2DL5A*0010103", "gene_name": "KIR2DL5A" }, "transcripts": [ { "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*00101new", "alleles": "KIR2DL5A*0010101,KIR2DL5A*0010102,KIR2DL5A*0010103,KIR2DL5A*0010104,KIR2DL5A*0010105,KIR2DL5A*0010106", "template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "HG00597#1#CM085776.1", "start": 58383167, "end": 58398414, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*00201new", "alleles": "KIR2DS5*0020101,KIR2DS5*0020102,KIR2DS5*0020103,KIR2DS5*0020104,KIR2DS5*0020105,KIR2DS5*0020106,KIR2DS5*0020107,KIR2DS5*0020108,KIR2DS5*0020109,KIR2DS5*0020110,KIR2DS5*0020111,KIR2DS5*0020112,KIR2DS5*0020113,KIR2DS5*0020114,KIR2DS5*0020115,KIR2DS5*0020116,KIR2DS5*0020117,KIR2DS5*0020118,KIR2DS5*0020119,KIR2DS5*0020120,KIR2DS5*0020121,KIR2DS5*0020122,KIR2DS5*0020123,KIR2DS5*0020124,KIR2DS5*0020125,KIR2DS5*0020126,KIR2DS5*0020127,KIR2DS5*0020128,KIR2DS5*0020129,KIR2DS5*0020130,KIR2DS5*0020131,KIR2DS5*0020132,KIR2DS5*0020133", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG00597#1#CM085776.1", "start": 58400134, "end": 58414853, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*0020103", "alleles": "KIR2DS1*0020103", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG00597#1#CM085776.1", "start": 58416490, "end": 58433512, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070110", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*0070110", "alleles": "KIR3DL2*0070110", "template_warning": "NA" } ] }, { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG00597#1#JBHDUU010000003.1", "start": 25945283, "end": 25953244, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29558856, "end": 29562394, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:02:09", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:02:09", "alleles": "HLA-F*01:01:02:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29629646, "end": 29631548, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:01", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:new", "alleles": "HLA-V*01:01:01:01,HLA-V*01:01:01:04", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29637730, "end": 29640660, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:new", "alleles": "HLA-P*02:01:01:01,HLA-P*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29665319, "end": 29668456, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:01:03:03", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:01:03:03", "alleles": "HLA-G*01:01:03:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29724996, "end": 29728497, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*02:07:01:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*02:07:01:01", "alleles": "HLA-H*02:07:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29733542, "end": 29736005, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*03:01:01:02", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*03:01:01:new", "alleles": "HLA-T*03:01:01:01,HLA-T*03:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29763650, "end": 29767197, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:01:01:03", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:new", "alleles": "HLA-K*01:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29771183, "end": 29771913, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:05", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:05:00:new", "alleles": "HLA-U*01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29779303, "end": 29782805, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*11:01:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*11:01:01:01", "alleles": "HLA-A*11:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29793142, "end": 29796113, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*01:01:01:07", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*01:new", "alleles": "HLA-W*01:01:01:01,HLA-W*01:01:01:02,HLA-W*01:01:01:04,HLA-W*01:01:01:07", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "HG00597#1#JBHDUU010000003.1", "start": 29843340, "end": 29846883, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:02", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", "transcript_id": "IAT000031", "gene_name": "HLA-J", "consensus": "HLA-J*01:01:01:02", "alleles": "HLA-J*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000033", "gene": "HLA-L", "contig": "HG00597#1#JBHDUU010000003.1", "start": 30096771, "end": 30100536, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000033", "template_allele": "HLA-L*01:03", "gene_name": "HLA-L" }, "transcripts": [ { "gene_id": "IAG000033", "transcript_id": "IAT000033", "gene_name": "HLA-L", "consensus": "HLA-L*01:03", "alleles": "HLA-L*01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000034", "gene": "HLA-N", "contig": "HG00597#1#JBHDUU010000003.1", "start": 30188595, "end": 30189229, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000034", "template_allele": "HLA-N*01:01:01:03", "gene_name": "HLA-N" }, "transcripts": [ { "gene_id": "IAG000034", "transcript_id": "IAT000034", "gene_name": "HLA-N", "consensus": "HLA-N*01:01:01:03", "alleles": "HLA-N*01:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000026", "gene": "HLA-E", "contig": "HG00597#1#JBHDUU010000003.1", "start": 30326663, "end": 30330484, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000026", "template_allele": "HLA-E*01:01:01:01", "gene_name": "HLA-E" }, "transcripts": [ { "gene_id": "IAG000026", "transcript_id": "IAT000026", "gene_name": "HLA-E", "consensus": "HLA-E*01:01:01:01", "alleles": "HLA-E*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG00597#1#JBHDUU010000003.1", "start": 31103607, "end": 31107909, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*08:01:01:01", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*08:01:01:01", "alleles": "HLA-C*08:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG00597#1#JBHDUU010000003.1", "start": 31189024, "end": 31193116, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*15:02:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*15:02:01:01", "alleles": 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"ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BS", "contig": "HG00621#1#CM087851.1", "start": 32008940, "end": 32023195, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BS" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG00621#1#CM087851.1", "start": 32427283, "end": 32432993, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:12", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:12", "alleles": "HLA-DRA*01:01:01:12", "template_warning": "NA" } ] }, { "gene_id": "IAG000020", "gene": "HLA-DRB4", "contig": "HG00621#1#CM087851.1", "start": 32523326, "end": 32538786, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000020", "template_allele": "HLA-DRB4*01:03:02:01", "gene_name": "HLA-DRB4" }, "transcripts": [ { "gene_id": "IAG000020", "transcript_id": "IAT000020", "gene_name": "HLA-DRB4", "consensus": "HLA-DRB4*01:03:02:01", "alleles": "HLA-DRB4*01:03:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG00621#1#CM087851.1", "start": 32651900, "end": 32667294, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*09:01:02:03", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*09:01:02:new", "alleles": "HLA-DRB1*09:01:02:01,HLA-DRB1*09:01:02:02,HLA-DRB1*09:01:02:03,HLA-DRB1*09:01:02:04,HLA-DRB1*09:01:02:05,HLA-DRB1*09:01:02:06,HLA-DRB1*09:01:02:07,HLA-DRB1*09:01:02:08,HLA-DRB1*09:01:02:09,HLA-DRB1*09:01:02:10,HLA-DRB1*09:01:02:11", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG00621#1#CM087851.1", "start": 32712552, "end": 32718172, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*03:02:01:04", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*03:02:01:04", "alleles": "HLA-DQA1*03:02:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG00621#1#CM087851.1", "start": 32730705, "end": 32737830, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*03:03:02:02", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*03:03:02:02", "alleles": "HLA-DQB1*03:03:02:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG00621#1#CM087851.1", "start": 32816013, "end": 32820966, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:03", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:03", "alleles": "HLA-DQA2*01:01:02:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG00621#1#CM087851.1", "start": 32830917, "end": 32838188, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:11", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:new", "alleles": "HLA-DQB2*01:01:01:01,HLA-DQB2*01:01:01:02,HLA-DQB2*01:01:01:03,HLA-DQB2*01:01:01:04,HLA-DQB2*01:01:01:05,HLA-DQB2*01:01:01:06,HLA-DQB2*01:01:01:07,HLA-DQB2*01:01:01:08,HLA-DQB2*01:01:01:09,HLA-DQB2*01:01:01:10,HLA-DQB2*01:01:01:11,HLA-DQB2*01:01:01:12,HLA-DQB2*01:01:01:13,HLA-DQB2*01:01:01:14,HLA-DQB2*01:01:01:15,HLA-DQB2*01:01:01:16,HLA-DQB2*01:01:01:17,HLA-DQB2*01:01:01:18", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG00621#1#CM087851.1", "start": 32885692, "end": 32890477, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:04:01:02", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:04:01:02", "alleles": "HLA-DOB*01:04:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG00621#1#CM087851.1", "start": 32901946, "end": 32911581, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:01:03:16", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:01:03:new", "alleles": "TAP2*01:01:03:01,TAP2*01:01:03:02,TAP2*01:01:03:03,TAP2*01:01:03:04,TAP2*01:01:03:05,TAP2*01:01:03:06,TAP2*01:01:03:07,TAP2*01:01:03:08,TAP2*01:01:03:09,TAP2*01:01:03:10,TAP2*01:01:03:11,TAP2*01:01:03:12,TAP2*01:01:03:13,TAP2*01:01:03:14,TAP2*01:01:03:15,TAP2*01:01:03:16,TAP2*01:01:03:17,TAP2*01:01:03:18,TAP2*01:01:03:19,TAP2*01:01:03:20,TAP2*01:01:03:21", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG00621#1#CM087851.1", "start": 32918139, "end": 32927408, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:01:01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:05", "alleles": "TAP1*01:01:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG00621#1#CM087851.1", "start": 33007905, "end": 33014195, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:02:01:01", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:02:01:01", "alleles": "HLA-DMB*01:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG00621#1#CM087851.1", "start": 33021542, "end": 33026552, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": 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"HLA-DPA1*02:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG00621#1#CM087851.1", "start": 33148448, "end": 33159913, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*05:01:01:01", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*05:01:01:01", "alleles": "HLA-DPB1*05:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "HG00621#1#CM087851.1", "start": 33163855, "end": 33170607, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:02", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:new", "alleles": "HLA-DPA2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG00621#1#CM087851.1", "start": 33184534, "end": 33202372, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:02:00:new", "alleles": "HLA-DPB2*03:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG00621#1#CM087860.1", "start": 57646656, "end": 57659020, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01502", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*01502new", "alleles": "KIR3DL3*01502", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": 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"KIR2DP1*0020109", "alleles": "KIR2DP1*0020109", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG00621#1#CM087860.1", "start": 57691951, "end": 57706693, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030285", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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"gene": "HLA-DRA", "contig": "HG00658#1#CM088776.1", "start": 32403277, "end": 32408945, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:03", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:03", "alleles": "HLA-DRA*01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG00658#1#CM088776.1", "start": 32456029, "end": 32469852, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*08:03:02:02", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*08:03:02:02", "alleles": "HLA-DRB1*08:03:02:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG00658#1#CM088776.1", "start": 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} ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG00658#1#CM088776.1", "start": 32988245, "end": 33006081, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:02:00:new", "alleles": "HLA-DPB2*03:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG00658#1#CM088784.1", "start": 56810599, "end": 56823000, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01001", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*01001new", "alleles": "KIR3DL3*01001", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": 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"MICB*014:01:01,MICB*014:01:02,MICB*014:01:03,MICB*014:01:04,MICB*014:01:05,MICB*014:01:06,MICB*014:01:07,MICB*014:01:08,MICB*014:01:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000065", "gene": "C4BL", "contig": "HG00706#1#CM100016.1", "start": 31962895, "end": 31983519, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BL" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BL", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000065.2", "gene": "C4BS", "contig": "HG00706#1#CM100016.1", "start": 31995750, "end": 32010007, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065.2", "gene_name": "C4BS" }, "transcripts": [ { "gene_id": "IAG000065.2", "transcript_id": "IAT000065.2", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG00706#1#CM100016.1", "start": 32413297, "end": 32419008, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:02", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:02", "alleles": "HLA-DRA*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000021", "gene": "HLA-DRB5", "contig": "HG00706#1#CM100016.1", "start": 32491332, "end": 32503945, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000021", "template_allele": "HLA-DRB5*01:01:01:05", "gene_name": "HLA-DRB5" }, "transcripts": [ { "gene_id": "IAG000021", "transcript_id": "IAT000021", "gene_name": "HLA-DRB5", "consensus": "HLA-DRB5*01:01:01:new", "alleles": "HLA-DRB5*01:01:01:01,HLA-DRB5*01:01:01:02,HLA-DRB5*01:01:01:03,HLA-DRB5*01:01:01:04,HLA-DRB5*01:01:01:05,HLA-DRB5*01:01:01:06,HLA-DRB5*01:01:01:07,HLA-DRB5*01:01:01:08,HLA-DRB5*01:01:01:09,HLA-DRB5*01:01:01:11", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG00706#1#CM100016.1", "start": 32552593, "end": 32564011, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*15:01:01:04", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*15:01:01:new", "alleles": "HLA-DRB1*15:01:01:32Q", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG00706#1#CM100016.1", "start": 32610440, "end": 32616924, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:02:01:03", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:02:01:03", "alleles": "HLA-DQA1*01:02:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG00706#1#CM100016.1", "start": 32633755, "end": 32640865, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*06:01:01:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*06:01:01:01", "alleles": "HLA-DQB1*06:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG00706#1#CM100016.1", "start": 32716601, "end": 32721790, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:10", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:new", "alleles": "HLA-DQA2*01:01:02:01,HLA-DQA2*01:01:02:02,HLA-DQA2*01:01:02:03,HLA-DQA2*01:01:02:04,HLA-DQA2*01:01:02:05,HLA-DQA2*01:01:02:06,HLA-DQA2*01:01:02:07,HLA-DQA2*01:01:02:08,HLA-DQA2*01:01:02:09,HLA-DQA2*01:01:02:10,HLA-DQA2*01:01:02:11,HLA-DQA2*01:01:02:12,HLA-DQA2*01:01:02:13,HLA-DQA2*01:01:02:14,HLA-DQA2*01:01:02:15,HLA-DQA2*01:01:02:16", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG00706#1#CM100016.1", "start": 32731483, "end": 32738849, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:15", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:new", "alleles": "HLA-DQB2*01:01:01:01,HLA-DQB2*01:01:01:02,HLA-DQB2*01:01:01:03,HLA-DQB2*01:01:01:04,HLA-DQB2*01:01:01:05,HLA-DQB2*01:01:01:06,HLA-DQB2*01:01:01:07,HLA-DQB2*01:01:01:08,HLA-DQB2*01:01:01:09,HLA-DQB2*01:01:01:10,HLA-DQB2*01:01:01:11,HLA-DQB2*01:01:01:12,HLA-DQB2*01:01:01:13,HLA-DQB2*01:01:01:14,HLA-DQB2*01:01:01:15,HLA-DQB2*01:01:01:16,HLA-DQB2*01:01:01:17,HLA-DQB2*01:01:01:18", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG00706#1#CM100016.1", "start": 32787207, "end": 32791455, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:27", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:27", "alleles": "HLA-DOB*01:01:01:27", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG00706#1#CM100016.1", "start": 32802814, "end": 32812449, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*02:01:03:04", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*02:new", "alleles": "TAP2*02:01:02:01,TAP2*02:01:02:02,TAP2*02:01:02:03,TAP2*02:01:02:04,TAP2*02:01:02:05,TAP2*02:01:02:06,TAP2*02:01:02:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG00706#1#CM100016.1", "start": 32819214, "end": 32827911, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:new", "alleles": "TAP1*01:01:01:01,TAP1*01:01:01:02,TAP1*01:01:01:03,TAP1*01:01:01:04,TAP1*01:01:01:05,TAP1*01:01:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG00706#1#CM100016.1", "start": 32908445, "end": 32915184, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:01:01:02", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:01:01:02", "alleles": "HLA-DMB*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG00706#1#CM100016.1", "start": 32922430, "end": 32927442, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:02:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:02:01:01", "alleles": "HLA-DMA*01:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG00706#1#CM100016.1", "start": 32980261, "end": 32983913, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:01:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:01:01", "alleles": "HLA-DOA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG00706#1#CM100016.1", "start": 33038189, "end": 33047978, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*02:02:02:01", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*02:02:02:01", "alleles": "HLA-DPA1*02:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG00706#1#CM100016.1", "start": 33049561, "end": 33061090, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*02:02:01:02", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*02:02:01:02", "alleles": "HLA-DPB1*02:02:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "HG00706#1#CM100016.1", "start": 33065042, "end": 33071784, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*02:01:01:02", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*02:01:01:02", "alleles": "HLA-DPA2*02:01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG00706#1#CM100016.1", "start": 33085712, "end": 33103260, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*01:01:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*01:01:02", "alleles": "HLA-DPB2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG00706#1#CM100023.1", "start": 57280406, "end": 57292767, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01004", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00901new", "alleles": "KIR3DL3*0090101,KIR3DL3*0090102,KIR3DL3*0090103,KIR3DL3*0090104,KIR3DL3*0090105,KIR3DL3*0090106,KIR3DL3*0090107", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG00706#1#CM100023.1", "start": 57294410, "end": 57309164, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010113", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG00706#1#CM100023.1", "start": 57310867, "end": 57323992, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": "KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG00706#1#CM100023.1", "start": 57325694, "end": 57340434, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030204", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": "KIR2DL1*0030201,KIR2DL1*0030202,KIR2DL1*0030203,KIR2DL1*0030204,KIR2DL1*0030205,KIR2DL1*0030206,KIR2DL1*0030207,KIR2DL1*0030208,KIR2DL1*0030209,KIR2DL1*0030210,KIR2DL1*0030211,KIR2DL1*0030212,KIR2DL1*0030213,KIR2DL1*0030214,KIR2DL1*0030215,KIR2DL1*0030216,KIR2DL1*0030217,KIR2DL1*0030218,KIR2DL1*0030219,KIR2DL1*0030220,KIR2DL1*0030221,KIR2DL1*0030222,KIR2DL1*0030223,KIR2DL1*0030224,KIR2DL1*0030225,KIR2DL1*0030226,KIR2DL1*0030227,KIR2DL1*0030228,KIR2DL1*0030229,KIR2DL1*0030230,KIR2DL1*0030231,KIR2DL1*0030232,KIR2DL1*0030233,KIR2DL1*0030234,KIR2DL1*0030235,KIR2DL1*0030236,KIR2DL1*0030237,KIR2DL1*0030238,KIR2DL1*0030239,KIR2DL1*0030240,KIR2DL1*0030241,KIR2DL1*0030242,KIR2DL1*0030243,KIR2DL1*0030244,KIR2DL1*0030245,KIR2DL1*0030246,KIR2DL1*0030247,KIR2DL1*0030248,KIR2DL1*0030249,KIR2DL1*0030250,KIR2DL1*0030251,KIR2DL1*0030252,KIR2DL1*0030253,KIR2DL1*0030254,KIR2DL1*0030255,KIR2DL1*0030256,KIR2DL1*0030257,KIR2DL1*0030258,KIR2DL1*0030259,KIR2DL1*0030260,KIR2DL1*0030261,KIR2DL1*0030262,KIR2DL1*0030263,KIR2DL1*0030264,KIR2DL1*0030265,KIR2DL1*0030266,KIR2DL1*0030267,KIR2DL1*0030268,KIR2DL1*0030269,KIR2DL1*0030270,KIR2DL1*0030271,KIR2DL1*0030272,KIR2DL1*0030273,KIR2DL1*0030274,KIR2DL1*0030275,KIR2DL1*0030276,KIR2DL1*0030277,KIR2DL1*0030278,KIR2DL1*0030279,KIR2DL1*0030280,KIR2DL1*0030281,KIR2DL1*0030282,KIR2DL1*0030283,KIR2DL1*0030284,KIR2DL1*0030285,KIR2DL1*0030286,KIR2DL1*0030287,KIR2DL1*0030288,KIR2DL1*0030289,KIR2DL1*0030290,KIR2DL1*0030291,KIR2DL1*0030292,KIR2DL1*0030293,KIR2DL1*0030294,KIR2DL1*0030295,KIR2DL1*0030296,KIR2DL1*0030297,KIR2DL1*0030298", "template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG00706#1#CM100023.1", "start": 57342199, "end": 57346438, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG00706#1#CM100023.1", "start": 57359495, "end": 57370637, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "HG00706#1#CM100023.1", "start": 57372354, "end": 57387285, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130103", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*0130103", "alleles": "KIR3DS1*0130103", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000047", "gene": "KIR2DL5A", "contig": "HG00706#1#CM100023.1", "start": 57388992, "end": 57398666, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000047", "template_allele": "KIR2DL5A*0050104", "gene_name": "KIR2DL5A" }, "transcripts": [ { "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*0050104", "alleles": "KIR2DL5A*0050104", "template_warning": "NA" } ] }, { "gene_id": "IAG000052", "gene": "KIR2DS3", "contig": "HG00706#1#CM100023.1", "start": 57400355, "end": 57415458, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000052", "template_allele": "KIR2DS3*0020101", "gene_name": "KIR2DS3" }, "transcripts": [ { "gene_id": "IAG000052", "transcript_id": "IAT000052", "gene_name": "KIR2DS3", "consensus": "KIR2DS3*00201new", "alleles": "KIR2DS3*0020101,KIR2DS3*0020102,KIR2DS3*0020103,KIR2DS3*0020104,KIR2DS3*0020105,KIR2DS3*0020106,KIR2DS3*0020107,KIR2DS3*0020108,KIR2DS3*0020109", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG00706#1#CM100023.1", "start": 57417178, "end": 57431897, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*00201new", "alleles": "KIR2DS1*0020101,KIR2DS1*0020102,KIR2DS1*0020103,KIR2DS1*0020104,KIR2DS1*0020105,KIR2DS1*0020106,KIR2DS1*0020107,KIR2DS1*0020108,KIR2DS1*0020109,KIR2DS1*0020110,KIR2DS1*0020111,KIR2DS1*0020112,KIR2DS1*0020113,KIR2DS1*0020114,KIR2DS1*0020115,KIR2DS1*0020116,KIR2DS1*0020117,KIR2DS1*0020118", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG00706#1#CM100023.1", "start": 57433534, "end": 57450556, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070110", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00701new", "alleles": "KIR3DL2*0070101,KIR3DL2*0070102,KIR3DL2*0070103,KIR3DL2*0070104,KIR3DL2*0070105,KIR3DL2*0070106,KIR3DL2*0070107,KIR3DL2*0070108,KIR3DL2*0070109,KIR3DL2*0070110,KIR3DL2*0070111,KIR3DL2*0070112,KIR3DL2*0070113,KIR3DL2*0070114", "template_warning": "NA" } ] } ] }, { "donor": "HG00706", "haplotype": "2", "source_member": "hprc-frz2-hlakir/200032_HG00706.mat.gtf.gz", "sha256": "6c1b8f2d4d29d05151d0bfc0395240449361acef1ac3e773b3096c363143a0ca", "path": "annotations/200032_HG00706.mat.gtf.gz", "genes": [ { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG00706#2#CM100060.1", "start": 26108857, "end": 26116819, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG00706#2#CM100060.1", "start": 29723170, "end": 29726719, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:01:01", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:01:01", "alleles": "HLA-F*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG00706#2#CM100060.1", "start": 29791658, "end": 29793560, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:01", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:01:01:01", "alleles": "HLA-V*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG00706#2#CM100060.1", "start": 29799698, "end": 29802628, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:01:01:01", "alleles": "HLA-P*02:01:01:01", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG00706#2#CM100060.1", "start": 29827291, "end": 29830428, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:01:01:01", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:01:01:01", "alleles": "HLA-G*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG00706#2#CM100060.1", "start": 29881573, "end": 29885070, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*01:01:01:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*01:01:01:01", "alleles": "HLA-H*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG00706#2#CM100060.1", "start": 29890003, "end": 29892488, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*01:01:01:05", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*01:01:01:05", "alleles": "HLA-T*01:01:01:05", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG00706#2#CM100060.1", "start": 29920214, "end": 29923761, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:01:01:03", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:new", "alleles": "HLA-K*01:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG00706#2#CM100060.1", "start": 29927747, "end": 29928477, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:05", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:05:00:new", "alleles": "HLA-U*01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG00706#2#CM100060.1", "start": 29935867, "end": 29939369, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*11:01:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*11:01:01:01", "alleles": "HLA-A*11:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "HG00706#2#CM100060.1", "start": 29949722, "end": 29952648, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*04:01", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*01:new", "alleles": "HLA-W*01:01:01:01,HLA-W*01:01:01:02,HLA-W*01:01:01:04,HLA-W*01:01:01:07", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "HG00706#2#CM100060.1", "start": 29999866, "end": 30003409, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:04", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", "transcript_id": "IAT000031", "gene_name": "HLA-J", "consensus": "HLA-J*01:01:01:04", "alleles": "HLA-J*01:01:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000033", "gene": "HLA-L", "contig": "HG00706#2#CM100060.1", "start": 30252883, "end": 30256652, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000033", "template_allele": "HLA-L*01:01:01:01", "gene_name": "HLA-L" }, "transcripts": [ { "gene_id": "IAG000033", "transcript_id": "IAT000033", "gene_name": "HLA-L", "consensus": "HLA-L*01:01:01:new", "alleles": "HLA-L*01:01:01:01,HLA-L*01:01:01:02,HLA-L*01:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000034", "gene": "HLA-N", "contig": "HG00706#2#CM100060.1", "start": 30344713, "end": 30345347, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000034", "template_allele": "HLA-N*01:01:01:03", "gene_name": "HLA-N" }, "transcripts": [ { "gene_id": "IAG000034", "transcript_id": "IAT000034", "gene_name": "HLA-N", "consensus": "HLA-N*01:01:01:new", "alleles": "HLA-N*01:01:01:01,HLA-N*01:01:01:02,HLA-N*01:01:01:03,HLA-N*01:01:01:04,HLA-N*01:01:01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000026", "gene": "HLA-E", "contig": "HG00706#2#CM100060.1", "start": 30485186, "end": 30489007, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000026", "template_allele": "HLA-E*01:03:01:01", "gene_name": "HLA-E" }, "transcripts": [ { "gene_id": "IAG000026", "transcript_id": "IAT000026", "gene_name": "HLA-E", "consensus": "HLA-E*01:03:01:01", "alleles": "HLA-E*01:03:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG00706#2#CM100060.1", "start": 31264877, "end": 31269158, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*08:01:01:21", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*08:01:01:new", "alleles": 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"strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000037", "template_allele": "HLA-S*01:02:01:03", "gene_name": "HLA-S" }, "transcripts": [ { "gene_id": "IAG000037", "transcript_id": "IAT000037", "gene_name": "HLA-S", "consensus": "HLA-S*01:02:01:03", "alleles": "HLA-S*01:02:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000060", "gene": "MICA", "contig": "HG00706#2#CM100060.1", "start": 31397669, "end": 31409972, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000060", "template_allele": "MICA*033:01:01", "gene_name": "MICA" }, "transcripts": [ { "gene_id": "IAG000060", "transcript_id": "IAT000060", "gene_name": "MICA", "consensus": "MICA*033:01:new", "alleles": "MICA*033:01:01,MICA*033:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG00706#2#CM100060.1", "start": 31491484, "end": 31504140, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*005:02:42", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*005:02:new", "alleles": 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"end": 31996411, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BL", "contig": "HG00706#2#CM100060.1", "start": 32008526, "end": 32029149, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BL" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BL", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG00706#2#CM100060.1", "start": 32432280, "end": 32437991, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:02", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:02", "alleles": "HLA-DRA*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000021", "gene": "HLA-DRB5", "contig": "HG00706#2#CM100060.1", "start": 32509791, "end": 32523237, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000021", "template_allele": "HLA-DRB5*01:01:01:02", "gene_name": "HLA-DRB5" }, "transcripts": [ { "gene_id": "IAG000021", "transcript_id": "IAT000021", "gene_name": "HLA-DRB5", "consensus": "HLA-DRB5*01:01:01:new", "alleles": "HLA-DRB5*01:01:01:01,HLA-DRB5*01:01:01:02,HLA-DRB5*01:01:01:03,HLA-DRB5*01:01:01:04,HLA-DRB5*01:01:01:05,HLA-DRB5*01:01:01:06,HLA-DRB5*01:01:01:07,HLA-DRB5*01:01:01:08,HLA-DRB5*01:01:01:09,HLA-DRB5*01:01:01:11", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG00706#2#CM100060.1", "start": 32571572, "end": 32582627, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*15:01:01:03", "gene_name": 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"IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*06:02:01:01", "alleles": "HLA-DQB1*06:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG00706#2#CM100060.1", "start": 32734714, "end": 32740568, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:01", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:01", "alleles": "HLA-DQA2*01:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG00706#2#CM100060.1", "start": 32749698, "end": 32756968, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:07", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:07", "alleles": "HLA-DQB2*01:01:01:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG00706#2#CM100060.1", "start": 32804815, "end": 32809599, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:24", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:24", "alleles": "HLA-DOB*01:01:01:24", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG00706#2#CM100060.1", "start": 32820925, "end": 32830559, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*02:01:03:01", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*02:01:03:01", "alleles": 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"alleles": "HLA-DMB*01:02:01:01,HLA-DMB*01:02:01:02,HLA-DMB*01:02:01:03,HLA-DMB*01:02:01:04,HLA-DMB*01:02:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG00706#2#CM100060.1", "start": 32940488, "end": 32945498, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:01", "alleles": "HLA-DMA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG00706#2#CM100060.1", "start": 32998314, "end": 33001966, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:01:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:01:01", "alleles": "HLA-DOA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG00706#2#CM100060.1", "start": 33056232, "end": 33065984, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*02:01:01:02", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*02:01:01:02", "alleles": "HLA-DPA1*02:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG00706#2#CM100060.1", "start": 33067594, "end": 33079059, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*14:01:01:05", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*14:01:01:05", "alleles": 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"partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG00706#2#CM100068.1", "start": 57312281, "end": 57324684, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01001", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*01001new", "alleles": "KIR3DL3*01001", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG00706#2#CM100068.1", "start": 57326327, "end": 57341079, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010103", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG00706#2#CM100068.1", "start": 57342782, "end": 57355907, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": "KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG00706#2#CM100068.1", "start": 57357609, "end": 57372349, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030207", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG00706#2#CM100068.1", "start": 57374114, "end": 57378353, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*00302new", "alleles": "KIR3DP1*0030201,KIR3DP1*0030202,KIR3DP1*0030203,KIR3DP1*0030204,KIR3DP1*0030205,KIR3DP1*0030206,KIR3DP1*0030207,KIR3DP1*0030208,KIR3DP1*0030209,KIR3DP1*0030210,KIR3DP1*0030211,KIR3DP1*0030212,KIR3DP1*0030213,KIR3DP1*0030214,KIR3DP1*0030215,KIR3DP1*0030216,KIR3DP1*0030217,KIR3DP1*0030218,KIR3DP1*0030219,KIR3DP1*0030220,KIR3DP1*0030221", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG00706#2#CM100068.1", "start": 57391399, "end": 57402575, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { 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"template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG02015#1#CM085893.1", "start": 32954931, "end": 32959941, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:01", "alleles": "HLA-DMA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG02015#1#CM085893.1", "start": 33012767, "end": 33016419, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:01:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:01:01", "alleles": "HLA-DOA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", 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{ "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*00101new", "alleles": "KIR2DL5A*0010101,KIR2DL5A*0010102,KIR2DL5A*0010103,KIR2DL5A*0010104,KIR2DL5A*0010105,KIR2DL5A*0010106", "template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "HG02027#2#JBHDTY010000063.1", "start": 18709169, "end": 18724416, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*0020111", "alleles": "KIR2DS5*0020111", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG02027#2#JBHDTY010000063.1", "start": 18726136, "end": 18740855, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, 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"start": 31538502, "end": 31550395, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*003:01:01", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*003:01:01", "alleles": "MICB*003:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "HG02080#2#CM092047.1", "start": 32022520, "end": 32043144, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BS", "contig": "HG02080#2#CM092047.1", "start": 32055260, "end": 32069515, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BS" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG02080#2#CM092047.1", "start": 32472558, "end": 32478268, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:02", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:02", "alleles": "HLA-DRA*01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000020", "gene": "HLA-DRB4", "contig": "HG02080#2#CM092047.1", "start": 32568535, "end": 32583998, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000020", "template_allele": "HLA-DRB4*01:03:01:02N", "gene_name": "HLA-DRB4" }, "transcripts": [ { "gene_id": "IAG000020", "transcript_id": "IAT000020", "gene_name": "HLA-DRB4", "consensus": "HLA-DRB4*01:03:01:02N", "alleles": "HLA-DRB4*01:03:01:02N", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG02080#2#CM092047.1", "start": 32698069, "end": 32714184, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*07:01:01:02", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*07:01:01:new", "alleles": 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"IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*02:01:01:01", "alleles": "HLA-DQA1*02:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG02080#2#CM092047.1", "start": 32784388, "end": 32791513, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*03:03:02:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*03:03:02:01", "alleles": "HLA-DQB1*03:03:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG02080#2#CM092047.1", "start": 32869648, "end": 32875502, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:01", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:01", "alleles": "HLA-DQA2*01:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG02080#2#CM092047.1", "start": 32884537, "end": 32891902, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:01", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:01", "alleles": "HLA-DQB2*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG02080#2#CM092047.1", "start": 32939764, "end": 32944549, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:05", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:05", "alleles": "HLA-DOB*01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG02080#2#CM092047.1", "start": 32955518, "end": 32966131, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*02:01:02:01", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*02:01:02:01", "alleles": "TAP2*02:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG02080#2#CM092047.1", "start": 32972062, "end": 32981331, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:01:01:03", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:03", "alleles": "TAP1*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", 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"gene_id": "IAG000011", "template_allele": "HLA-DPB2*01:01:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*01:new", "alleles": "HLA-DPB2*01:01:01,HLA-DPB2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG02080#2#CM092056.1", "start": 58169162, "end": 58181560, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01001", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*01001new", "alleles": "KIR3DL3*01001", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG02080#2#CM092056.1", "start": 58183203, "end": 58197956, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010103", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG02080#2#CM092056.1", "start": 58199659, "end": 58212784, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG02080#2#CM092056.1", "start": 58230991, "end": 58235230, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*00302new", "alleles": "KIR3DP1*0030201,KIR3DP1*0030202,KIR3DP1*0030203,KIR3DP1*0030204,KIR3DP1*0030205,KIR3DP1*0030206,KIR3DP1*0030207,KIR3DP1*0030208,KIR3DP1*0030209,KIR3DP1*0030210,KIR3DP1*0030211,KIR3DP1*0030212,KIR3DP1*0030213,KIR3DP1*0030214,KIR3DP1*0030215,KIR3DP1*0030216,KIR3DP1*0030217,KIR3DP1*0030218,KIR3DP1*0030219,KIR3DP1*0030220,KIR3DP1*0030221", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02080#2#CM092056.1", "start": 58248276, "end": 58259452, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0010201", "alleles": "KIR2DL4*0010201", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", "contig": "HG02080#2#CM092056.1", "start": 58261169, "end": 58275717, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000055", "template_allele": "KIR3DL1*0290101", "gene_name": "KIR3DL1" }, "transcripts": [ { "gene_id": "IAG000055", "transcript_id": "IAT000055", "gene_name": "KIR3DL1", "consensus": "KIR3DL1*0290101", "alleles": "KIR3DL1*0290101", "template_warning": "NA" } ] }, { "gene_id": "IAG000053", "gene": "KIR2DS4", "contig": "HG02080#2#CM092056.1", "start": 58277436, "end": 58293527, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000053", "template_allele": "KIR2DS4*0010102", "gene_name": "KIR2DS4" }, "transcripts": [ { "gene_id": "IAG000053", "transcript_id": "IAT000053", "gene_name": "KIR2DS4", "consensus": "KIR2DS4*0010102", "alleles": "KIR2DS4*0010102", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG02080#2#CM092056.1", "start": 58295167, "end": 58312153, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0020105", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*0020105", "alleles": "KIR3DL2*0020105", "template_warning": "NA" } ] } ] }, { "donor": "HG02083", "haplotype": "1", "source_member": "hprc-frz2-hlakir/200121_HG02083.pat.gtf.gz", "sha256": "27a2ed2dfc9b218d4f2ff5c239f2b2d1f2d91fa5da658e0abdea956769cffba0", "path": "annotations/200121_HG02083.pat.gtf.gz", "genes": [ { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56697662, "end": 56710018, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*00902", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00902new", "alleles": "KIR3DL3*00902", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56711661, "end": 56726423, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010109", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56728126, "end": 56741251, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020119", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*0020119", "alleles": "KIR2DP1*0020119", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56742953, "end": 56757693, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030205", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": "KIR2DL1*0030201,KIR2DL1*0030202,KIR2DL1*0030203,KIR2DL1*0030204,KIR2DL1*0030205,KIR2DL1*0030206,KIR2DL1*0030207,KIR2DL1*0030208,KIR2DL1*0030209,KIR2DL1*0030210,KIR2DL1*0030211,KIR2DL1*0030212,KIR2DL1*0030213,KIR2DL1*0030214,KIR2DL1*0030215,KIR2DL1*0030216,KIR2DL1*0030217,KIR2DL1*0030218,KIR2DL1*0030219,KIR2DL1*0030220,KIR2DL1*0030221,KIR2DL1*0030222,KIR2DL1*0030223,KIR2DL1*0030224,KIR2DL1*0030225,KIR2DL1*0030226,KIR2DL1*0030227,KIR2DL1*0030228,KIR2DL1*0030229,KIR2DL1*0030230,KIR2DL1*0030231,KIR2DL1*0030232,KIR2DL1*0030233,KIR2DL1*0030234,KIR2DL1*0030235,KIR2DL1*0030236,KIR2DL1*0030237,KIR2DL1*0030238,KIR2DL1*0030239,KIR2DL1*0030240,KIR2DL1*0030241,KIR2DL1*0030242,KIR2DL1*0030243,KIR2DL1*0030244,KIR2DL1*0030245,KIR2DL1*0030246,KIR2DL1*0030247,KIR2DL1*0030248,KIR2DL1*0030249,KIR2DL1*0030250,KIR2DL1*0030251,KIR2DL1*0030252,KIR2DL1*0030253,KIR2DL1*0030254,KIR2DL1*0030255,KIR2DL1*0030256,KIR2DL1*0030257,KIR2DL1*0030258,KIR2DL1*0030259,KIR2DL1*0030260,KIR2DL1*0030261,KIR2DL1*0030262,KIR2DL1*0030263,KIR2DL1*0030264,KIR2DL1*0030265,KIR2DL1*0030266,KIR2DL1*0030267,KIR2DL1*0030268,KIR2DL1*0030269,KIR2DL1*0030270,KIR2DL1*0030271,KIR2DL1*0030272,KIR2DL1*0030273,KIR2DL1*0030274,KIR2DL1*0030275,KIR2DL1*0030276,KIR2DL1*0030277,KIR2DL1*0030278,KIR2DL1*0030279,KIR2DL1*0030280,KIR2DL1*0030281,KIR2DL1*0030282,KIR2DL1*0030283,KIR2DL1*0030284,KIR2DL1*0030285,KIR2DL1*0030286,KIR2DL1*0030287,KIR2DL1*0030288,KIR2DL1*0030289,KIR2DL1*0030290,KIR2DL1*0030291,KIR2DL1*0030292,KIR2DL1*0030293,KIR2DL1*0030294,KIR2DL1*0030295,KIR2DL1*0030296,KIR2DL1*0030297,KIR2DL1*0030298", "template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56759458, "end": 56763697, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030212", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030212", "alleles": "KIR3DP1*0030212", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56776743, "end": 56787919, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0010201", "alleles": "KIR2DL4*0010201", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56789703, "end": 56804044, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000055", "template_allele": "KIR3DL1*0150208", "gene_name": "KIR3DL1" }, "transcripts": [ { "gene_id": "IAG000055", "transcript_id": "IAT000055", "gene_name": "KIR3DL1", "consensus": "KIR3DL1*0150208", "alleles": "KIR3DL1*0150208", "template_warning": "NA" } ] }, { "gene_id": "IAG000053", "gene": "KIR2DS4", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56805903, "end": 56821994, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000053", "template_allele": "KIR2DS4*0010102", "gene_name": "KIR2DS4" }, "transcripts": [ { "gene_id": "IAG000053", "transcript_id": "IAT000053", "gene_name": "KIR2DS4", "consensus": "KIR2DS4*0010102", "alleles": "KIR2DS4*0010102", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG02083#1#JBHDTV010000015.1", "start": 56823634, "end": 56840623, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0020105", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00201new", "alleles": "KIR3DL2*0020101,KIR3DL2*0020102,KIR3DL2*0020103,KIR3DL2*0020104,KIR3DL2*0020105,KIR3DL2*0020106,KIR3DL2*0020107,KIR3DL2*0020108,KIR3DL2*0020109,KIR3DL2*0020110,KIR3DL2*0020111,KIR3DL2*0020112,KIR3DL2*0020113,KIR3DL2*0020114,KIR3DL2*0020115", "template_warning": "NA" } ] }, { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG02083#1#JBHDTV010000048.1", "start": 26067817, "end": 26075778, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:03", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29683219, "end": 29686757, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:02:09", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:02:09", "alleles": "HLA-F*01:01:02:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29754011, "end": 29755913, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:01", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:new", "alleles": "HLA-V*01:01:01:01,HLA-V*01:01:01:04", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29762107, "end": 29765037, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:new", "alleles": "HLA-P*02:01:01:01,HLA-P*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29789696, "end": 29792833, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:01:03:03", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:01:03:03", "alleles": "HLA-G*01:01:03:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29849375, "end": 29852876, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*02:07:01:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*02:07:01:01", "alleles": "HLA-H*02:07:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29857921, "end": 29860384, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*03:01:01:02", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*03:01:01:new", "alleles": "HLA-T*03:01:01:01,HLA-T*03:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29888029, "end": 29891576, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:01:01:03", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:new", "alleles": "HLA-K*01:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29895562, "end": 29896292, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:05", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:05:00:new", "alleles": "HLA-U*01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29903682, "end": 29907184, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*11:01:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*11:01:01:01", "alleles": "HLA-A*11:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "HG02083#1#JBHDTV010000048.1", "start": 29917538, "end": 29920464, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*04:01", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*01:new", "alleles": "HLA-W*01:01:01:01,HLA-W*01:01:01:02,HLA-W*01:01:01:04,HLA-W*01:01:01:07", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", 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"template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG02083#2#CM086965.1", "start": 33066857, "end": 33073596, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:01:01:01", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:01:01:01", "alleles": "HLA-DMB*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG02083#2#CM086965.1", "start": 33080841, "end": 33085851, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:01", "alleles": "HLA-DMA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG02083#2#CM086965.1", "start": 33138642, "end": 33142294, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:04:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:04:01", "alleles": "HLA-DOA*01:01:04:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG02083#2#CM086965.1", "start": 33196573, "end": 33206362, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*02:02:02:01", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*02:02:02:01", "alleles": "HLA-DPA1*02:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": 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31407775, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*003:01:06", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*003:01:new", "alleles": "MICB*003:01:01,MICB*003:01:02,MICB*003:01:03,MICB*003:01:04,MICB*003:01:05,MICB*003:01:06,MICB*003:01:07,MICB*003:01:08,MICB*003:01:09,MICB*003:01:10,MICB*003:01:11,MICB*003:01:12", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "HG02129#2#CM085860.1", "start": 31880019, "end": 31900642, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BL", "contig": "HG02129#2#CM085860.1", "start": 31912757, "end": 31933380, "strand": "+", "source": "RefSeq", 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32494565, "end": 32505421, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*15:02:01:06", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*15:02:01:new", "alleles": "HLA-DRB1*15:02:01:02,HLA-DRB1*15:02:01:03,HLA-DRB1*15:02:01:04,HLA-DRB1*15:02:01:05,HLA-DRB1*15:02:01:06,HLA-DRB1*15:02:01:07,HLA-DRB1*15:02:01:08", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG02129#2#CM085860.1", "start": 32552653, "end": 32558329, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:01:01:10", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:01:01:new", "alleles": 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"template_allele": "HLA-DPB1*05:01:01:33", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*05:01:01:33", "alleles": "HLA-DPB1*05:01:01:33", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "HG02129#2#CM085860.1", "start": 33005559, "end": 33012323, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:02", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:new", "alleles": "HLA-DPA2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG02129#2#CM085860.1", "start": 33026250, "end": 33044086, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:02:00:new", "alleles": "HLA-DPB2*03:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG02129#2#CM085867.1", "start": 57624541, "end": 57636897, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*0090101", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00901new", "alleles": "KIR3DL3*0090101,KIR3DL3*0090102,KIR3DL3*0090103,KIR3DL3*0090104,KIR3DL3*0090105,KIR3DL3*0090106,KIR3DL3*0090107", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG02129#2#CM085867.1", "start": 57638540, "end": 57653295, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010109", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG02129#2#CM085867.1", "start": 57654998, "end": 57668123, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": 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"gene": "HLA-DQB1", "contig": "HG02132#1#CM086897.1", "start": 32696141, "end": 32703266, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*03:03:02:03", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*03:03:02:03", "alleles": "HLA-DQB1*03:03:02:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG02132#1#CM086897.1", "start": 32781362, "end": 32786555, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:09", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:09", "alleles": "HLA-DQA2*01:01:02:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": 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"template_allele": "HLA-DOB*01:01:01:09", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:09", "alleles": "HLA-DOB*01:01:01:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG02132#1#CM086897.1", "start": 32868757, "end": 32878391, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:02:02", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:02:02:new", "alleles": "TAP2*01:02:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG02132#1#CM086897.1", "start": 32885157, "end": 32893858, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*02:01:01:new", "alleles": "TAP1*02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG02132#1#CM086897.1", "start": 32974703, "end": 32980993, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:02:01:01", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:02:01:new", "alleles": "HLA-DMB*01:02:01:01,HLA-DMB*01:02:01:02,HLA-DMB*01:02:01:03,HLA-DMB*01:02:01:04,HLA-DMB*01:02:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG02132#1#CM086897.1", "start": 32988339, "end": 32993349, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, 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"IAG000043", "gene": "KIR2DL1", "contig": "HG02132#1#JBHDTR010000057.1", "start": 56570335, "end": 56585075, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030205", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG02132#1#JBHDTR010000057.1", "start": 56586840, "end": 56591079, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0100102", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*01001new", "alleles": "KIR3DP1*0100101,KIR3DP1*0100102", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02132#1#JBHDTR010000057.1", "start": 56604136, "end": 56615278, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": 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"IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:03", "alleles": "HLA-DQA2*01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG02514#1#CM098732.1", "start": 32887326, "end": 32894691, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:02", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:02", "alleles": "HLA-DQB2*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG02514#1#CM098732.1", "start": 32943580, "end": 32948365, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:01", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": 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}, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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} ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG02514#2#CM098748.1", "start": 33065378, "end": 33082918, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*01:01:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*01:new", "alleles": "HLA-DPB2*01:01:01,HLA-DPB2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG02514#2#CM098757.1", "start": 56266813, "end": 56279211, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*01001", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*01001new", "alleles": "KIR3DL3*01001", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", 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}, "transcripts": [ { "gene_id": "IAG000052", "transcript_id": "IAT000052", "gene_name": "KIR2DS3", "consensus": "KIR2DS3*00103new", "alleles": "KIR2DS3*0010301,KIR2DS3*0010302,KIR2DS3*0010303,KIR2DS3*0010304,KIR2DS3*0010305,KIR2DS3*0010306,KIR2DS3*0010307,KIR2DS3*0010308,KIR2DS3*0010309,KIR2DS3*0010310,KIR2DS3*0010311,KIR2DS3*0010312,KIR2DS3*0010313,KIR2DS3*0010314,KIR2DS3*0010315,KIR2DS3*0010316,KIR2DS3*0010317,KIR2DS3*0010318,KIR2DS3*0010319,KIR2DS3*0010320,KIR2DS3*0010321", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG02523#2#CM086948.1", "start": 58096129, "end": 58109257, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0010201", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00102new", "alleles": "KIR2DP1*0010201,KIR2DP1*0010202,KIR2DP1*0010203,KIR2DP1*0010204,KIR2DP1*0010205,KIR2DP1*0010206,KIR2DP1*0010207,KIR2DP1*0010208,KIR2DP1*0010209,KIR2DP1*0010210,KIR2DP1*0010211,KIR2DP1*0010212", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG02523#2#CM086948.1", "start": 58110962, "end": 58125709, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0040101", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00401new", "alleles": "KIR2DL1*0040101,KIR2DL1*0040102,KIR2DL1*0040103,KIR2DL1*0040104,KIR2DL1*0040105,KIR2DL1*0040106,KIR2DL1*0040107,KIR2DL1*0040108,KIR2DL1*0040109,KIR2DL1*0040110,KIR2DL1*0040111,KIR2DL1*0040112,KIR2DL1*0040113,KIR2DL1*0040114,KIR2DL1*0040115,KIR2DL1*0040116,KIR2DL1*0040117,KIR2DL1*0040118,KIR2DL1*0040119,KIR2DL1*0040120,KIR2DL1*0040121,KIR2DL1*0040122,KIR2DL1*0040123,KIR2DL1*0040124,KIR2DL1*0040125,KIR2DL1*0040126,KIR2DL1*0040127,KIR2DL1*0040128,KIR2DL1*0040129,KIR2DL1*0040130,KIR2DL1*0040131,KIR2DL1*0040132,KIR2DL1*0040133,KIR2DL1*0040134", "template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG02523#2#CM086948.1", "start": 58127474, "end": 58131709, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030101", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030101", "alleles": "KIR3DP1*0030101", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02523#2#CM086948.1", "start": 58144766, "end": 58155908, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "HG02523#2#CM086948.1", "start": 58157415, "end": 58172372, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130111", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*01301new", "alleles": "KIR3DS1*0130101,KIR3DS1*0130102,KIR3DS1*0130103,KIR3DS1*0130104,KIR3DS1*0130105,KIR3DS1*0130106,KIR3DS1*0130107,KIR3DS1*0130108,KIR3DS1*0130109,KIR3DS1*0130110,KIR3DS1*0130111,KIR3DS1*0130112,KIR3DS1*0130113,KIR3DS1*0130114,KIR3DS1*0130115,KIR3DS1*0130116,KIR3DS1*0130117,KIR3DS1*0130118,KIR3DS1*0130119,KIR3DS1*0130120,KIR3DS1*0130121,KIR3DS1*0130122,KIR3DS1*0130123,KIR3DS1*0130124,KIR3DS1*0130125,KIR3DS1*0130126,KIR3DS1*0130127,KIR3DS1*0130128,KIR3DS1*0130129,KIR3DS1*0130130,KIR3DS1*0130131,KIR3DS1*0130132", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000047", "gene": "KIR2DL5A", "contig": "HG02523#2#CM086948.1", "start": 58174263, "end": 58183941, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000047", "template_allele": "KIR2DL5A*0010103", "gene_name": "KIR2DL5A" }, "transcripts": [ { "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*0010103", "alleles": "KIR2DL5A*0010103", "template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "HG02523#2#CM086948.1", "start": 58185662, "end": 58200909, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*00201new", "alleles": "KIR2DS5*0020101,KIR2DS5*0020102,KIR2DS5*0020103,KIR2DS5*0020104,KIR2DS5*0020105,KIR2DS5*0020106,KIR2DS5*0020107,KIR2DS5*0020108,KIR2DS5*0020109,KIR2DS5*0020110,KIR2DS5*0020111,KIR2DS5*0020112,KIR2DS5*0020113,KIR2DS5*0020114,KIR2DS5*0020115,KIR2DS5*0020116,KIR2DS5*0020117,KIR2DS5*0020118,KIR2DS5*0020119,KIR2DS5*0020120,KIR2DS5*0020121,KIR2DS5*0020122,KIR2DS5*0020123,KIR2DS5*0020124,KIR2DS5*0020125,KIR2DS5*0020126,KIR2DS5*0020127,KIR2DS5*0020128,KIR2DS5*0020129,KIR2DS5*0020130,KIR2DS5*0020131,KIR2DS5*0020132,KIR2DS5*0020133", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG02523#2#CM086948.1", "start": 58202629, "end": 58217348, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*00201new", "alleles": "KIR2DS1*0020101,KIR2DS1*0020102,KIR2DS1*0020103,KIR2DS1*0020104,KIR2DS1*0020105,KIR2DS1*0020106,KIR2DS1*0020107,KIR2DS1*0020108,KIR2DS1*0020109,KIR2DS1*0020110,KIR2DS1*0020111,KIR2DS1*0020112,KIR2DS1*0020113,KIR2DS1*0020114,KIR2DS1*0020115,KIR2DS1*0020116,KIR2DS1*0020117,KIR2DS1*0020118", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG02523#2#CM086948.1", "start": 58218985, "end": 58236009, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0020114", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00201new", "alleles": "KIR3DL2*0020101,KIR3DL2*0020102,KIR3DL2*0020103,KIR3DL2*0020104,KIR3DL2*0020105,KIR3DL2*0020106,KIR3DL2*0020107,KIR3DL2*0020108,KIR3DL2*0020109,KIR3DL2*0020110,KIR3DL2*0020111,KIR3DL2*0020112,KIR3DL2*0020113,KIR3DL2*0020114,KIR3DL2*0020115", "template_warning": "NA" } ] } ] }, { "donor": "HG02602", "haplotype": "1", "source_member": "hprc-frz2-hlakir/200155_HG02602.pat.gtf.gz", "sha256": "a420fb72c684349a160f1f594e502e05b5e1d8c001e335f824c59d77d293f17e", "path": "annotations/200155_HG02602.pat.gtf.gz", "genes": [ { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG02602#1#CM099687.1", "start": 26143300, "end": 26151257, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG02602#1#CM099687.1", "start": 29783851, "end": 29787389, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:02:11", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:02:11", "alleles": "HLA-F*01:01:02:11", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG02602#1#CM099687.1", "start": 29852339, "end": 29854219, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:02", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:new", "alleles": "HLA-V*01:01:01:02,HLA-V*01:01:01:03,HLA-V*01:01:01:01,HLA-V*01:01:01:04", "template_warning": "no-stop_codon" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG02602#1#CM099687.1", "start": 29860351, "end": 29863285, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:new", "alleles": "HLA-P*02:01:01:01,HLA-P*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG02602#1#CM099687.1", "start": 29887969, "end": 29891106, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:03:01:02", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:03:01:02", "alleles": "HLA-G*01:03:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG02602#1#CM099687.1", "start": 29941203, "end": 29944700, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*01:03:01:02", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*01:03:01:02", "alleles": "HLA-H*01:03:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG02602#1#CM099687.1", "start": 29949633, "end": 29952118, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*01:01:01:02", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*01:01:01:new", "alleles": "HLA-T*01:01:01:01,HLA-T*01:01:01:02,HLA-T*01:01:01:03", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG02602#1#CM099687.1", "start": 29979850, "end": 29983404, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:02", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:new", "alleles": "HLA-K*01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG02602#1#CM099687.1", "start": 29985985, "end": 29986717, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:03", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:03:00:new", "alleles": "HLA-U*01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG02602#1#CM099687.1", "start": 29994196, "end": 29997712, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*02:05:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*02:05:01:01", "alleles": "HLA-A*02:05:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "HG02602#1#CM099687.1", "start": 30008063, "end": 30010999, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*04:01", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*05:new", "alleles": "HLA-W*05:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "HG02602#1#CM099687.1", "start": 30058218, "end": 30061738, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:14", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", "transcript_id": "IAT000031", "gene_name": "HLA-J", "consensus": "HLA-J*01:01:01:14", "alleles": "HLA-J*01:01:01:14", "template_warning": "NA" } ] }, { "gene_id": "IAG000033", "gene": "HLA-L", "contig": "HG02602#1#CM099687.1", "start": 30310818, "end": 30314587, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000033", "template_allele": "HLA-L*01:01:01:01", "gene_name": "HLA-L" }, "transcripts": [ { "gene_id": "IAG000033", "transcript_id": "IAT000033", "gene_name": "HLA-L", "consensus": "HLA-L*01:01:01:01", "alleles": "HLA-L*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000034", "gene": "HLA-N", "contig": "HG02602#1#CM099687.1", "start": 30402630, "end": 30403264, 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"gene_id": "IAG000003", "template_allele": "HLA-C*05:01:01:03", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*05:01:01:03", "alleles": "HLA-C*05:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG02602#1#CM099687.1", "start": 31408862, "end": 31412942, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*44:02:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*44:02:01:01", "alleles": "HLA-B*44:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", "contig": "HG02602#1#CM099687.1", "start": 31437292, "end": 31438165, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000037", "template_allele": "HLA-S*01:02:01:03", "gene_name": 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"IAG000064", "gene": "C4AL", "contig": "HG02602#1#CM099687.1", "start": 32034570, "end": 32055194, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BS", "contig": "HG02602#1#CM099687.1", "start": 32067310, "end": 32081565, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BS" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG02602#1#CM099687.1", "start": 32484609, "end": 32490319, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:02", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:02", "alleles": "HLA-DRA*01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000020", "gene": "HLA-DRB4", "contig": "HG02602#1#CM099687.1", "start": 32580586, "end": 32596049, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000020", "template_allele": "HLA-DRB4*01:03:01:02N", "gene_name": "HLA-DRB4" }, "transcripts": [ { "gene_id": "IAG000020", "transcript_id": "IAT000020", "gene_name": "HLA-DRB4", "consensus": "HLA-DRB4*01:03:01:02N", "alleles": "HLA-DRB4*01:03:01:02N", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG02602#1#CM099687.1", "start": 32710109, "end": 32726228, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*07:01:01:02", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*07:01:01:02", "alleles": "HLA-DRB1*07:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG02602#1#CM099687.1", "start": 32776204, "end": 32782606, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*02:01:01:01", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*02:01:01:01", "alleles": "HLA-DQA1*02:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG02602#1#CM099687.1", "start": 32796432, "end": 32803557, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*03:03:02:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*03:03:02:01", "alleles": "HLA-DQB1*03:03:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG02602#1#CM099687.1", "start": 32881692, "end": 32887546, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:01", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:01", "alleles": "HLA-DQA2*01:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG02602#1#CM099687.1", "start": 32896582, "end": 32903947, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:01", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:01", "alleles": "HLA-DQB2*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG02602#1#CM099687.1", "start": 32951809, "end": 32956594, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:05", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:05", "alleles": "HLA-DOB*01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG02602#1#CM099687.1", "start": 32967563, "end": 32978176, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*02:01:02:01", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*02:01:02:01", "alleles": "TAP2*02:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": 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"transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*0010202", "alleles": "KIR3DL3*0010202", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG02602#1#CM099695.1", "start": 57637736, "end": 57652533, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0020101", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00201new", "alleles": "KIR2DL3*0020101,KIR2DL3*0020102,KIR2DL3*0020103", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG02602#1#CM099695.1", "start": 57654236, "end": 57667359, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0030103", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*0030103", "alleles": "KIR2DP1*0030103", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG02602#1#CM099695.1", "start": 57669064, "end": 57683802, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0020105", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00201new", "alleles": 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}, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0150101", "alleles": "KIR3DP1*0150101", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02602#1#CM099695.1", "start": 57702863, "end": 57714005, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*00501new", "alleles": "KIR2DL4*0050101,KIR2DL4*0050102,KIR2DL4*0050103,KIR2DL4*0050104,KIR2DL4*0050105,KIR2DL4*0050106,KIR2DL4*0050107", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "HG02602#1#CM099695.1", "start": 57715722, "end": 57730173, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130114", 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} ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG02698#1#CM086825.1", "start": 33049283, "end": 33059072, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*02:07:01:04", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*02:07:01:04", "alleles": "HLA-DPA1*02:07:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG02698#1#CM086825.1", "start": 33060655, "end": 33072186, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*04:01:01:75", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*04:01:01:new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "HG02698#1#CM086825.1", "start": 33076138, "end": 33082880, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:01:01", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:01:01:new", "alleles": "HLA-DPA2*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG02698#1#CM086825.1", "start": 33096810, "end": 33114330, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:01:01:03", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:01:01:new", "alleles": "HLA-DPB2*03:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG02698#1#CM086833.1", "start": 57411274, "end": 57423658, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*036", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*02000new", "alleles": "KIR3DL3*020", "template_warning": "NA" } ] }, { "gene_id": "IAG000051", "gene": "KIR2DS2", "contig": "HG02698#1#CM086833.1", "start": 57425264, "end": 57439841, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000051", "template_allele": "KIR2DS2*00106", "gene_name": "KIR2DS2" }, "transcripts": [ { "gene_id": "IAG000051", "transcript_id": "IAT000051", "gene_name": "KIR2DS2", "consensus": "KIR2DS2*00101new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "HG02698#1#CM086833.1", "start": 57575749, "end": 57590996, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020106", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*00201new", "alleles": "KIR2DS5*0020101,KIR2DS5*0020102,KIR2DS5*0020103,KIR2DS5*0020104,KIR2DS5*0020105,KIR2DS5*0020106,KIR2DS5*0020107,KIR2DS5*0020108,KIR2DS5*0020109,KIR2DS5*0020110,KIR2DS5*0020111,KIR2DS5*0020112,KIR2DS5*0020113,KIR2DS5*0020114,KIR2DS5*0020115,KIR2DS5*0020116,KIR2DS5*0020117,KIR2DS5*0020118,KIR2DS5*0020119,KIR2DS5*0020120,KIR2DS5*0020121,KIR2DS5*0020122,KIR2DS5*0020123,KIR2DS5*0020124,KIR2DS5*0020125,KIR2DS5*0020126,KIR2DS5*0020127,KIR2DS5*0020128,KIR2DS5*0020129,KIR2DS5*0020130,KIR2DS5*0020131,KIR2DS5*0020132,KIR2DS5*0020133", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG02698#1#CM086833.1", "start": 57592716, "end": 57607435, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*00201new", "alleles": "KIR2DS1*0020101,KIR2DS1*0020102,KIR2DS1*0020103,KIR2DS1*0020104,KIR2DS1*0020105,KIR2DS1*0020106,KIR2DS1*0020107,KIR2DS1*0020108,KIR2DS1*0020109,KIR2DS1*0020110,KIR2DS1*0020111,KIR2DS1*0020112,KIR2DS1*0020113,KIR2DS1*0020114,KIR2DS1*0020115,KIR2DS1*0020116,KIR2DS1*0020117,KIR2DS1*0020118", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG02698#1#CM086833.1", "start": 57609072, "end": 57626094, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070110", "gene_name": "KIR3DL2" }, 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"template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG02698#2#CM086846.1", "start": 33056264, "end": 33066038, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*01:03:01:34", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*01:03:01:34", "alleles": "HLA-DPA1*01:03:01:34", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG02698#2#CM086846.1", "start": 33067987, "end": 33078123, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*1359:01", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*03:01:27:new", "alleles": "HLA-DPB1*03:01:27", "template_warning": "NA" } ] }, { "gene_id": 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"alleles": "KIR2DS5*0020111", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG02735#2#CM089352.1", "start": 56357520, "end": 56372239, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020115", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*0020115", "alleles": "KIR2DS1*0020115", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG02735#2#CM089352.1", "start": 56373876, "end": 56390906, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070113", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00701new", "alleles": "KIR3DL2*0070101,KIR3DL2*0070102,KIR3DL2*0070103,KIR3DL2*0070104,KIR3DL2*0070105,KIR3DL2*0070106,KIR3DL2*0070107,KIR3DL2*0070108,KIR3DL2*0070109,KIR3DL2*0070110,KIR3DL2*0070111,KIR3DL2*0070112,KIR3DL2*0070113,KIR3DL2*0070114", "template_warning": "NA" } ] }, { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 26065759, "end": 26073719, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29703514, "end": 29707033, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:02:10", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:02:10", "alleles": "HLA-F*01:01:02:10", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29771989, "end": 29773869, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:03", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:new", "alleles": "HLA-V*01:01:01:02,HLA-V*01:01:01:03,HLA-V*01:01:01:01,HLA-V*01:01:01:04", "template_warning": "no-stop_codon" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29779989, "end": 29782933, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*new", "alleles": "HLA-P*01:01:01:01,HLA-P*01:01:01:02,HLA-P*02:01:01:01,HLA-P*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29807580, "end": 29810717, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:04:01:01", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:04:01:01", "alleles": "HLA-G*01:04:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29867109, "end": 29870608, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*02:08:01:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*02:08:01:01", "alleles": "HLA-H*02:08:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29875610, "end": 29878096, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*03:01:01:02", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*03:01:01:02", "alleles": "HLA-T*03:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29906108, "end": 29909662, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:04", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:04", "alleles": "HLA-K*01:04", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29912245, "end": 29912977, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:06", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:06:00:new", "alleles": "HLA-U*01:06", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29920376, "end": 29923893, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*33:03:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*33:03:01:01", "alleles": "HLA-A*33:03:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29932823, "end": 29935758, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*04:01", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*01:new", "alleles": "HLA-W*01:01:01:01,HLA-W*01:01:01:02,HLA-W*01:01:01:04,HLA-W*01:01:01:07", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000042", "gene": "HLA-Y", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 29991255, "end": 29993508, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000042", "template_allele": "HLA-Y*02:01", "gene_name": "HLA-Y" }, "transcripts": [ { "gene_id": "IAG000042", "transcript_id": "IAT000042", "gene_name": "HLA-Y", "consensus": "HLA-Y*02:01", "alleles": "HLA-Y*02:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000036", "gene": "HLA-R", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 30004326, "end": 30007245, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000036", "template_allele": "HLA-R*01:01:01:01", "gene_name": "HLA-R" }, "transcripts": [ { "gene_id": "IAG000036", "transcript_id": "IAT000036", "gene_name": "HLA-R", "consensus": "HLA-R*01:new", "alleles": "HLA-R*01:01:01:01,HLA-R*01:01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 30048727, "end": 30052263, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:09", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", "transcript_id": "IAT000031", "gene_name": "HLA-J", "consensus": "HLA-J*01:01:01:09", "alleles": "HLA-J*01:01:01:09", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000033", "gene": "HLA-L", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 30301835, "end": 30305604, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000033", "template_allele": "HLA-L*01:01:01:01", "gene_name": "HLA-L" }, "transcripts": [ { "gene_id": "IAG000033", "transcript_id": "IAT000033", "gene_name": "HLA-L", "consensus": "HLA-L*01:01:01:01", "alleles": "HLA-L*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000034", "gene": "HLA-N", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 30393669, "end": 30394303, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000034", "template_allele": "HLA-N*01:01:01:05", "gene_name": "HLA-N" }, "transcripts": [ { "gene_id": "IAG000034", "transcript_id": "IAT000034", "gene_name": "HLA-N", "consensus": "HLA-N*01:01:01:05", "alleles": "HLA-N*01:01:01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000026", "gene": "HLA-E", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 30531718, "end": 30535539, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000026", "template_allele": "HLA-E*01:01:01:06", "gene_name": "HLA-E" }, "transcripts": [ { "gene_id": "IAG000026", "transcript_id": "IAT000026", "gene_name": "HLA-E", "consensus": "HLA-E*01:01:01:06", "alleles": "HLA-E*01:01:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 31310462, "end": 31314765, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*03:02:02:05", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*03:02:02:05", "alleles": "HLA-C*03:02:02:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 31394966, "end": 31399059, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*58:01:01:03", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*58:01:01:03", "alleles": "HLA-B*58:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 31423397, "end": 31424270, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000037", "template_allele": "HLA-S*01:02:01:01", "gene_name": "HLA-S" }, "transcripts": [ { "gene_id": "IAG000037", "transcript_id": "IAT000037", "gene_name": "HLA-S", "consensus": "HLA-S*01:02:01:01", "alleles": "HLA-S*01:02:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000060", "gene": "MICA", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 31444715, "end": 31457456, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000060", "template_allele": "MICA*002:01:07", "gene_name": "MICA" }, "transcripts": [ { "gene_id": "IAG000060", "transcript_id": "IAT000060", "gene_name": "MICA", "consensus": "MICA*002:01:07", "alleles": "MICA*002:01:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 31542265, "end": 31554931, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*008:01:11", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*008:01:new", "alleles": "MICB*008:01:01,MICB*008:01:02,MICB*008:01:03,MICB*008:01:04,MICB*008:01:05,MICB*008:01:06,MICB*008:01:07,MICB*008:01:08,MICB*008:01:09,MICB*008:01:10,MICB*008:01:11,MICB*008:01:12,MICB*008:01:13,MICB*008:01:14,MICB*008:01:15,MICB*008:01:16,MICB*008:01:17,MICB*008:01:18,MICB*008:01:19,MICB*008:01:20", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 32026525, "end": 32047149, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 32450518, "end": 32456228, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:01", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:new", "alleles": "HLA-DRA*01:01:01:01,HLA-DRA*01:01:01:02,HLA-DRA*01:01:01:03,HLA-DRA*01:01:01:04,HLA-DRA*01:01:01:05,HLA-DRA*01:01:01:06,HLA-DRA*01:01:01:07,HLA-DRA*01:01:01:08,HLA-DRA*01:01:01:09,HLA-DRA*01:01:01:10,HLA-DRA*01:01:01:11,HLA-DRA*01:01:01:12,HLA-DRA*01:01:01:13,HLA-DRA*01:01:01:14,HLA-DRA*01:01:01:15,HLA-DRA*01:01:01:16,HLA-DRA*01:01:01:17,HLA-DRA*01:01:01:18,HLA-DRA*01:01:01:19,HLA-DRA*01:01:01:20,HLA-DRA*01:01:01:21,HLA-DRA*01:01:01:22,HLA-DRA*01:01:01:23,HLA-DRA*01:01:01:24,HLA-DRA*01:01:01:25,HLA-DRA*01:01:01:26,HLA-DRA*01:01:01:27,HLA-DRA*01:01:01:28,HLA-DRA*01:01:01:29,HLA-DRA*01:01:01:30,HLA-DRA*01:01:01:31,HLA-DRA*01:01:01:32,HLA-DRA*01:01:01:33", "template_warning": "NA" } ] }, { "gene_id": "IAG000019", "gene": "HLA-DRB3", "contig": "HG02735#2#JBHIIJ010000060.1", "start": 32503446, "end": 32516574, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { 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] }, { "gene_id": "IAG000060", "gene": "MICA", "contig": "HG02738#1#JBJXQJ010000012.1", "start": 31434098, "end": 31445644, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000060", "template_allele": "MICA*008:01:07", "gene_name": "MICA" }, "transcripts": [ { "gene_id": "IAG000060", "transcript_id": "IAT000060", "gene_name": "MICA", "consensus": "MICA*008:01:07", "alleles": "MICA*008:01:07", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG02738#1#JBJXQJ010000012.1", "start": 31525359, "end": 31538020, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*002:01:29", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*002:01:new", "alleles": 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"IAT000021", "gene_name": "HLA-DRB5", "consensus": "HLA-DRB5*01:01:01:new", "alleles": "HLA-DRB5*01:01:01:01,HLA-DRB5*01:01:01:02,HLA-DRB5*01:01:01:03,HLA-DRB5*01:01:01:04,HLA-DRB5*01:01:01:05,HLA-DRB5*01:01:01:06,HLA-DRB5*01:01:01:07,HLA-DRB5*01:01:01:08,HLA-DRB5*01:01:01:09,HLA-DRB5*01:01:01:11", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG03017#2#CM088928.1", "start": 32517305, "end": 32528360, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*15:01:01:03", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*15:01:01:03", "alleles": "HLA-DRB1*15:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG03017#2#CM088928.1", "start": 32575151, "end": 32581635, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:02:01:03", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:02:01:03", "alleles": "HLA-DQA1*01:02:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG03017#2#CM088928.1", "start": 32598469, "end": 32605579, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*06:01:01:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*06:01:01:01", "alleles": "HLA-DQB1*06:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG03017#2#CM088928.1", "start": 32681300, "end": 32686531, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:05:01:01", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:05:01:new", "alleles": "HLA-DQA2*01:05:01:01,HLA-DQA2*01:05:01:02,HLA-DQA2*01:05:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG03017#2#CM088928.1", "start": 32696197, "end": 32703560, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:08", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:08", "alleles": "HLA-DQB2*01:08", "template_warning": "no-start_codon" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG03017#2#CM088928.1", "start": 32752119, "end": 32755967, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:07", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:07", "alleles": "HLA-DOB*01:01:01:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG03017#2#CM088928.1", "start": 32767698, "end": 32777332, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*02:01:04", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*02:new", "alleles": "TAP2*02:01:02:01,TAP2*02:01:02:02,TAP2*02:01:02:03,TAP2*02:01:02:04,TAP2*02:01:02:05,TAP2*02:01:02:06,TAP2*02:01:02:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG03017#2#CM088928.1", "start": 32784104, "end": 32792805, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*02:01:01:new", "alleles": "TAP1*02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG03017#2#CM088928.1", "start": 32873869, "end": 32879761, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:01:01:07", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:01:01:07", "alleles": "HLA-DMB*01:01:01:07", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG03017#2#CM088928.1", "start": 32887306, "end": 32892316, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:01", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:new", "alleles": "HLA-DMA*01:01:01:01,HLA-DMA*01:01:01:02,HLA-DMA*01:01:01:03,HLA-DMA*01:01:01:04,HLA-DMA*01:01:01:05,HLA-DMA*01:01:01:06,HLA-DMA*01:01:01:07,HLA-DMA*01:01:01:08,HLA-DMA*01:01:01:09,HLA-DMA*01:01:01:10,HLA-DMA*01:01:01:11,HLA-DMA*01:01:01:12,HLA-DMA*01:01:01:13,HLA-DMA*01:01:01:14,HLA-DMA*01:01:01:15,HLA-DMA*01:01:01:16,HLA-DMA*01:01:01:17,HLA-DMA*01:01:01:18,HLA-DMA*01:01:01:19,HLA-DMA*01:01:01:20,HLA-DMA*01:01:01:21,HLA-DMA*01:01:01:22,HLA-DMA*01:01:01:23,HLA-DMA*01:01:01:24,HLA-DMA*01:01:01:25,HLA-DMA*01:01:01:26,HLA-DMA*01:01:01:27,HLA-DMA*01:01:01:28,HLA-DMA*01:01:01:29,HLA-DMA*01:01:01:30,HLA-DMA*01:01:01:31,HLA-DMA*01:01:01:32,HLA-DMA*01:01:01:33,HLA-DMA*01:01:01:34,HLA-DMA*01:01:01:35,HLA-DMA*01:01:01:36,HLA-DMA*01:01:01:37,HLA-DMA*01:01:01:38,HLA-DMA*01:01:01:39,HLA-DMA*01:01:01:40,HLA-DMA*01:01:01:41,HLA-DMA*01:01:01:42,HLA-DMA*01:01:01:43", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG03017#2#CM088928.1", "start": 32945114, "end": 32948766, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:02:45", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:02:new", "alleles": "HLA-DOA*01:01:02:01,HLA-DOA*01:01:02:02,HLA-DOA*01:01:02:03,HLA-DOA*01:01:02:04,HLA-DOA*01:01:02:05,HLA-DOA*01:01:02:06,HLA-DOA*01:01:02:07,HLA-DOA*01:01:02:08,HLA-DOA*01:01:02:09,HLA-DOA*01:01:02:10,HLA-DOA*01:01:02:11,HLA-DOA*01:01:02:12,HLA-DOA*01:01:02:13,HLA-DOA*01:01:02:14,HLA-DOA*01:01:02:15,HLA-DOA*01:01:02:16,HLA-DOA*01:01:02:17,HLA-DOA*01:01:02:18,HLA-DOA*01:01:02:19,HLA-DOA*01:01:02:20,HLA-DOA*01:01:02:21,HLA-DOA*01:01:02:22,HLA-DOA*01:01:02:23,HLA-DOA*01:01:02:24,HLA-DOA*01:01:02:25,HLA-DOA*01:01:02:26,HLA-DOA*01:01:02:27,HLA-DOA*01:01:02:28,HLA-DOA*01:01:02:29,HLA-DOA*01:01:02:30,HLA-DOA*01:01:02:31,HLA-DOA*01:01:02:32,HLA-DOA*01:01:02:33,HLA-DOA*01:01:02:34,HLA-DOA*01:01:02:35,HLA-DOA*01:01:02:36,HLA-DOA*01:01:02:37,HLA-DOA*01:01:02:38,HLA-DOA*01:01:02:39,HLA-DOA*01:01:02:40,HLA-DOA*01:01:02:41,HLA-DOA*01:01:02:42,HLA-DOA*01:01:02:43,HLA-DOA*01:01:02:44,HLA-DOA*01:01:02:45,HLA-DOA*01:01:02:46,HLA-DOA*01:01:02:47,HLA-DOA*01:01:02:48,HLA-DOA*01:01:02:49,HLA-DOA*01:01:02:50,HLA-DOA*01:01:02:51,HLA-DOA*01:01:02:52,HLA-DOA*01:01:02:53,HLA-DOA*01:01:02:54,HLA-DOA*01:01:02:55,HLA-DOA*01:01:02:56,HLA-DOA*01:01:02:57,HLA-DOA*01:01:02:58,HLA-DOA*01:01:02:59,HLA-DOA*01:01:02:60", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG03017#2#CM088928.1", "start": 33006527, "end": 33012478, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*04:01:01:03", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*04:01:01:03", "alleles": "HLA-DPA1*04:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG03017#2#CM088928.1", "start": 33014283, "end": 33025754, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*296:01", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*296:01", "alleles": "HLA-DPB1*296:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG03017#2#CM088928.1", "start": 33050249, "end": 33067769, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:01:01:03", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:new", "alleles": "HLA-DPB2*03:01:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG03017#2#CM088938.1", "start": 57187364, "end": 57199720, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*0090101", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00901new", "alleles": "KIR3DL3*0090101,KIR3DL3*0090102,KIR3DL3*0090103,KIR3DL3*0090104,KIR3DL3*0090105,KIR3DL3*0090106,KIR3DL3*0090107", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG03017#2#CM088938.1", "start": 57201363, "end": 57216118, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010107", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "HG03017#2#CM088938.1", "start": 57217821, "end": 57230946, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020109", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": "KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "HG03017#2#CM088938.1", "start": 57232648, "end": 57247388, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030205", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": "KIR2DL1*0030201,KIR2DL1*0030202,KIR2DL1*0030203,KIR2DL1*0030204,KIR2DL1*0030205,KIR2DL1*0030206,KIR2DL1*0030207,KIR2DL1*0030208,KIR2DL1*0030209,KIR2DL1*0030210,KIR2DL1*0030211,KIR2DL1*0030212,KIR2DL1*0030213,KIR2DL1*0030214,KIR2DL1*0030215,KIR2DL1*0030216,KIR2DL1*0030217,KIR2DL1*0030218,KIR2DL1*0030219,KIR2DL1*0030220,KIR2DL1*0030221,KIR2DL1*0030222,KIR2DL1*0030223,KIR2DL1*0030224,KIR2DL1*0030225,KIR2DL1*0030226,KIR2DL1*0030227,KIR2DL1*0030228,KIR2DL1*0030229,KIR2DL1*0030230,KIR2DL1*0030231,KIR2DL1*0030232,KIR2DL1*0030233,KIR2DL1*0030234,KIR2DL1*0030235,KIR2DL1*0030236,KIR2DL1*0030237,KIR2DL1*0030238,KIR2DL1*0030239,KIR2DL1*0030240,KIR2DL1*0030241,KIR2DL1*0030242,KIR2DL1*0030243,KIR2DL1*0030244,KIR2DL1*0030245,KIR2DL1*0030246,KIR2DL1*0030247,KIR2DL1*0030248,KIR2DL1*0030249,KIR2DL1*0030250,KIR2DL1*0030251,KIR2DL1*0030252,KIR2DL1*0030253,KIR2DL1*0030254,KIR2DL1*0030255,KIR2DL1*0030256,KIR2DL1*0030257,KIR2DL1*0030258,KIR2DL1*0030259,KIR2DL1*0030260,KIR2DL1*0030261,KIR2DL1*0030262,KIR2DL1*0030263,KIR2DL1*0030264,KIR2DL1*0030265,KIR2DL1*0030266,KIR2DL1*0030267,KIR2DL1*0030268,KIR2DL1*0030269,KIR2DL1*0030270,KIR2DL1*0030271,KIR2DL1*0030272,KIR2DL1*0030273,KIR2DL1*0030274,KIR2DL1*0030275,KIR2DL1*0030276,KIR2DL1*0030277,KIR2DL1*0030278,KIR2DL1*0030279,KIR2DL1*0030280,KIR2DL1*0030281,KIR2DL1*0030282,KIR2DL1*0030283,KIR2DL1*0030284,KIR2DL1*0030285,KIR2DL1*0030286,KIR2DL1*0030287,KIR2DL1*0030288,KIR2DL1*0030289,KIR2DL1*0030290,KIR2DL1*0030291,KIR2DL1*0030292,KIR2DL1*0030293,KIR2DL1*0030294,KIR2DL1*0030295,KIR2DL1*0030296,KIR2DL1*0030297,KIR2DL1*0030298", "template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG03017#2#CM088938.1", "start": 57249153, "end": 57253392, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG03017#2#CM088938.1", "start": 57266438, "end": 57277614, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*00102new", "alleles": "KIR2DL4*0010201,KIR2DL4*0010202,KIR2DL4*0010203", "template_warning": "NA" } ] }, { "gene_id": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG03239#1#CM088748.1", "start": 31184464, "end": 31188766, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*12:02:02:01", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*12:02:02:01", "alleles": "HLA-C*12:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG03239#1#CM088748.1", "start": 31269396, "end": 31273250, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*52:01:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*52:01:01:01", "alleles": "HLA-B*52:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", 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}, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG03654#1#CM086836.1", "start": 31459664, "end": 31472486, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*005:02:32", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*005:02:new", "alleles": "MICB*005:02:01,MICB*005:02:03,MICB*005:02:04,MICB*005:02:05,MICB*005:02:06,MICB*005:02:07,MICB*005:02:08,MICB*005:02:09,MICB*005:02:10,MICB*005:02:11,MICB*005:02:12,MICB*005:02:13,MICB*005:02:14,MICB*005:02:15,MICB*005:02:16,MICB*005:02:17,MICB*005:02:18,MICB*005:02:19,MICB*005:02:20,MICB*005:02:21,MICB*005:02:22,MICB*005:02:23,MICB*005:02:24,MICB*005:02:25,MICB*005:02:26,MICB*005:02:27,MICB*005:02:28,MICB*005:02:29,MICB*005:02:30,MICB*005:02:31,MICB*005:02:32,MICB*005:02:33,MICB*005:02:34,MICB*005:02:35,MICB*005:02:36,MICB*005:02:37,MICB*005:02:38,MICB*005:02:39,MICB*005:02:40,MICB*005:02:41,MICB*005:02:42,MICB*005:02:43,MICB*005:02:44,MICB*005:02:45,MICB*005:02:46,MICB*005:02:47,MICB*005:02:48,MICB*005:02:49,MICB*005:02:50,MICB*005:02:51,MICB*005:02:52,MICB*005:02:53,MICB*005:02:54,MICB*005:02:55,MICB*005:02:56,MICB*005:02:57,MICB*005:02:58,MICB*005:02:59", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "HG03654#1#CM086836.1", "start": 31944788, "end": 31965410, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BL", "contig": "HG03654#1#CM086836.1", "start": 31977525, "end": 31998148, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BL" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BL", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "HG03654#1#CM086836.1", "start": 32401329, "end": 32407039, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:03", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:03", "alleles": "HLA-DRA*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000019", "gene": "HLA-DRB3", "contig": "HG03654#1#CM086836.1", "start": 32454372, "end": 32467171, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000019", "template_allele": "HLA-DRB3*02:02:01:10", "gene_name": "HLA-DRB3" }, "transcripts": [ { "gene_id": "IAG000019", "transcript_id": "IAT000019", "gene_name": "HLA-DRB3", "consensus": "HLA-DRB3*02:02:01:new", "alleles": "HLA-DRB3*02:02:01:new", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "HG03654#1#CM086836.1", "start": 32517847, "end": 32531101, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*14:54:01:10", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*14:54:01:new", "alleles": "HLA-DRB1*14:54:01:01,HLA-DRB1*14:54:01:02,HLA-DRB1*14:54:01:03,HLA-DRB1*14:54:01:04,HLA-DRB1*14:54:01:05,HLA-DRB1*14:54:01:06,HLA-DRB1*14:54:01:07,HLA-DRB1*14:54:01:08,HLA-DRB1*14:54:01:09,HLA-DRB1*14:54:01:10,HLA-DRB1*14:54:01:11,HLA-DRB1*14:54:01:12,HLA-DRB1*14:54:01:13,HLA-DRB1*14:54:01:14,HLA-DRB1*14:54:01:15,HLA-DRB1*14:54:01:16,HLA-DRB1*14:54:01:17", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "HG03654#1#CM086836.1", "start": 32574762, "end": 32581246, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:04:01:02", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:04:01:new", "alleles": "HLA-DQA1*01:04:01:01,HLA-DQA1*01:04:01:02,HLA-DQA1*01:04:01:03,HLA-DQA1*01:04:01:04,HLA-DQA1*01:04:01:05,HLA-DQA1*01:04:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "HG03654#1#CM086836.1", "start": 32598103, "end": 32605191, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*05:03:01:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*05:03:01:01", "alleles": "HLA-DQB1*05:03:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "HG03654#1#CM086836.1", "start": 32679659, "end": 32684852, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:11", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:new", "alleles": "HLA-DQA2*01:01:02:01,HLA-DQA2*01:01:02:02,HLA-DQA2*01:01:02:03,HLA-DQA2*01:01:02:04,HLA-DQA2*01:01:02:05,HLA-DQA2*01:01:02:06,HLA-DQA2*01:01:02:07,HLA-DQA2*01:01:02:08,HLA-DQA2*01:01:02:09,HLA-DQA2*01:01:02:10,HLA-DQA2*01:01:02:11,HLA-DQA2*01:01:02:12,HLA-DQA2*01:01:02:13,HLA-DQA2*01:01:02:14,HLA-DQA2*01:01:02:15,HLA-DQA2*01:01:02:16", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG03654#1#CM086836.1", "start": 32694544, "end": 32701909, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:01", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:new", "alleles": "HLA-DQB2*01:01:01:01,HLA-DQB2*01:01:01:02,HLA-DQB2*01:01:01:03,HLA-DQB2*01:01:01:04,HLA-DQB2*01:01:01:05,HLA-DQB2*01:01:01:06,HLA-DQB2*01:01:01:07,HLA-DQB2*01:01:01:08,HLA-DQB2*01:01:01:09,HLA-DQB2*01:01:01:10,HLA-DQB2*01:01:01:11,HLA-DQB2*01:01:01:12,HLA-DQB2*01:01:01:13,HLA-DQB2*01:01:01:14,HLA-DQB2*01:01:01:15,HLA-DQB2*01:01:01:16,HLA-DQB2*01:01:01:17,HLA-DQB2*01:01:01:18", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG03654#1#CM086836.1", "start": 32749435, "end": 32754220, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:03:09", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:03:09", "alleles": "HLA-DOB*01:01:03:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "HG03654#1#CM086836.1", "start": 32765346, "end": 32775954, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:01:07:05", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:01:07:new", "alleles": "TAP2*01:01:07:01,TAP2*01:01:07:02,TAP2*01:01:07:03,TAP2*01:01:07:04,TAP2*01:01:07:05,TAP2*01:01:07:06,TAP2*01:01:07:07,TAP2*01:01:07:08,TAP2*01:01:07:09,TAP2*01:01:07:10,TAP2*01:01:07:11,TAP2*01:01:07:12", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG03654#1#CM086836.1", "start": 32782092, "end": 32790795, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*02:01:01:new", "alleles": "TAP1*02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG03654#1#CM086836.1", "start": 32871885, "end": 32877777, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:01:01:30", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:01:01:30", "alleles": "HLA-DMB*01:01:01:30", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG03654#1#CM086836.1", "start": 32885414, "end": 32890315, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:05", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:new", "alleles": 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32946796, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:02:02", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:02:02", "alleles": "HLA-DOA*01:01:02:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG03654#1#CM086836.1", "start": 33001282, "end": 33011038, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*01:03:01:05", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*01:03:01:05", "alleles": "HLA-DPA1*01:03:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG03654#1#CM086836.1", "start": 33012621, "end": 33024136, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*04:02:01:04", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*04:02:01:04", "alleles": "HLA-DPB1*04:02:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "HG03654#1#CM086836.1", "start": 33028088, "end": 33034830, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:01:02", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:01:01:02", "alleles": "HLA-DPA2*01:01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "HG03654#1#CM086836.1", "start": 33048759, "end": 33066589, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:01:01:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:01:01:new", "alleles": "HLA-DPB2*03:01:01:01,HLA-DPB2*03:01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG03654#1#CM086842.1", "start": 57617076, "end": 57629465, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*0040201", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*0040201", "alleles": "KIR3DL3*0040201", "template_warning": "NA" } ] }, { "gene_id": "IAG000051", "gene": "KIR2DS2", "contig": "HG03654#1#CM086842.1", "start": 57631071, "end": 57645649, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000051", "template_allele": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG03688#2#JBHDTK010000054.1", "start": 32782794, "end": 32790065, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:07:01:02", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:07:01:new", "alleles": "HLA-DQB2*01:07:01:01,HLA-DQB2*01:07:01:02,HLA-DQB2*01:07:01:03,HLA-DQB2*01:07:01:04", "template_warning": "no-start_codon" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG03688#2#JBHDTK010000054.1", "start": 32837596, "end": 32842381, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:03:09", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": 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] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "HG03834#1#CM085805.1", "start": 57524485, "end": 57536840, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*0010101", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*0010101", "alleles": "KIR3DL3*0010101", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "HG03834#1#CM085805.1", "start": 57538485, "end": 57553260, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010110", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG03927#1#CM086641.1", "start": 59869425, "end": 59873664, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG03927#1#CM086641.1", "start": 59886707, "end": 59897883, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010305", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0010305", "alleles": "KIR2DL4*0010305", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", 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"KIR2DL1*0030201,KIR2DL1*0030202,KIR2DL1*0030203,KIR2DL1*0030204,KIR2DL1*0030205,KIR2DL1*0030206,KIR2DL1*0030207,KIR2DL1*0030208,KIR2DL1*0030209,KIR2DL1*0030210,KIR2DL1*0030211,KIR2DL1*0030212,KIR2DL1*0030213,KIR2DL1*0030214,KIR2DL1*0030215,KIR2DL1*0030216,KIR2DL1*0030217,KIR2DL1*0030218,KIR2DL1*0030219,KIR2DL1*0030220,KIR2DL1*0030221,KIR2DL1*0030222,KIR2DL1*0030223,KIR2DL1*0030224,KIR2DL1*0030225,KIR2DL1*0030226,KIR2DL1*0030227,KIR2DL1*0030228,KIR2DL1*0030229,KIR2DL1*0030230,KIR2DL1*0030231,KIR2DL1*0030232,KIR2DL1*0030233,KIR2DL1*0030234,KIR2DL1*0030235,KIR2DL1*0030236,KIR2DL1*0030237,KIR2DL1*0030238,KIR2DL1*0030239,KIR2DL1*0030240,KIR2DL1*0030241,KIR2DL1*0030242,KIR2DL1*0030243,KIR2DL1*0030244,KIR2DL1*0030245,KIR2DL1*0030246,KIR2DL1*0030247,KIR2DL1*0030248,KIR2DL1*0030249,KIR2DL1*0030250,KIR2DL1*0030251,KIR2DL1*0030252,KIR2DL1*0030253,KIR2DL1*0030254,KIR2DL1*0030255,KIR2DL1*0030256,KIR2DL1*0030257,KIR2DL1*0030258,KIR2DL1*0030259,KIR2DL1*0030260,KIR2DL1*0030261,KIR2DL1*0030262,KIR2DL1*0030263,KIR2DL1*0030264,KIR2DL1*0030265,KIR2DL1*0030266,KIR2DL1*0030267,KIR2DL1*0030268,KIR2DL1*0030269,KIR2DL1*0030270,KIR2DL1*0030271,KIR2DL1*0030272,KIR2DL1*0030273,KIR2DL1*0030274,KIR2DL1*0030275,KIR2DL1*0030276,KIR2DL1*0030277,KIR2DL1*0030278,KIR2DL1*0030279,KIR2DL1*0030280,KIR2DL1*0030281,KIR2DL1*0030282,KIR2DL1*0030283,KIR2DL1*0030284,KIR2DL1*0030285,KIR2DL1*0030286,KIR2DL1*0030287,KIR2DL1*0030288,KIR2DL1*0030289,KIR2DL1*0030290,KIR2DL1*0030291,KIR2DL1*0030292,KIR2DL1*0030293,KIR2DL1*0030294,KIR2DL1*0030295,KIR2DL1*0030296,KIR2DL1*0030297,KIR2DL1*0030298", "template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG04115#2#CM086773.1", "start": 58221977, "end": 58226216, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG04115#2#CM086773.1", "start": 58239274, "end": 58250416, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "HG04115#2#CM086773.1", "start": 58251921, "end": 58267064, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130101", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*01301new", "alleles": "KIR3DS1*0130101,KIR3DS1*0130102,KIR3DS1*0130103,KIR3DS1*0130104,KIR3DS1*0130105,KIR3DS1*0130106,KIR3DS1*0130107,KIR3DS1*0130108,KIR3DS1*0130109,KIR3DS1*0130110,KIR3DS1*0130111,KIR3DS1*0130112,KIR3DS1*0130113,KIR3DS1*0130114,KIR3DS1*0130115,KIR3DS1*0130116,KIR3DS1*0130117,KIR3DS1*0130118,KIR3DS1*0130119,KIR3DS1*0130120,KIR3DS1*0130121,KIR3DS1*0130122,KIR3DS1*0130123,KIR3DS1*0130124,KIR3DS1*0130125,KIR3DS1*0130126,KIR3DS1*0130127,KIR3DS1*0130128,KIR3DS1*0130129,KIR3DS1*0130130,KIR3DS1*0130131,KIR3DS1*0130132", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000047", "gene": "KIR2DL5A", "contig": "HG04115#2#CM086773.1", "start": 58268771, "end": 58278449, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000047", "template_allele": "KIR2DL5A*0010103", "gene_name": "KIR2DL5A" }, "transcripts": [ { "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*0010103", "alleles": "KIR2DL5A*0010103", "template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "HG04115#2#CM086773.1", "start": 58280170, "end": 58295417, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*00201new", "alleles": "KIR2DS5*0020101,KIR2DS5*0020102,KIR2DS5*0020103,KIR2DS5*0020104,KIR2DS5*0020105,KIR2DS5*0020106,KIR2DS5*0020107,KIR2DS5*0020108,KIR2DS5*0020109,KIR2DS5*0020110,KIR2DS5*0020111,KIR2DS5*0020112,KIR2DS5*0020113,KIR2DS5*0020114,KIR2DS5*0020115,KIR2DS5*0020116,KIR2DS5*0020117,KIR2DS5*0020118,KIR2DS5*0020119,KIR2DS5*0020120,KIR2DS5*0020121,KIR2DS5*0020122,KIR2DS5*0020123,KIR2DS5*0020124,KIR2DS5*0020125,KIR2DS5*0020126,KIR2DS5*0020127,KIR2DS5*0020128,KIR2DS5*0020129,KIR2DS5*0020130,KIR2DS5*0020131,KIR2DS5*0020132,KIR2DS5*0020133", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "HG04115#2#CM086773.1", "start": 58297137, "end": 58311856, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*0020103", "alleles": "KIR2DS1*0020103", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "HG04115#2#CM086773.1", "start": 58313493, "end": 58330515, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070110", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00701new", "alleles": "KIR3DL2*0070101,KIR3DL2*0070102,KIR3DL2*0070103,KIR3DL2*0070104,KIR3DL2*0070105,KIR3DL2*0070106,KIR3DL2*0070107,KIR3DL2*0070108,KIR3DL2*0070109,KIR3DL2*0070110,KIR3DL2*0070111,KIR3DL2*0070112,KIR3DL2*0070113,KIR3DL2*0070114", "template_warning": "NA" } ] }, { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "HG04115#2#JBHDTG010000049.1", "start": 26120609, "end": 26128571, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29735404, "end": 29738947, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:01:28", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:01:new", "alleles": "HLA-F*01:01:01:01,HLA-F*01:01:01:02,HLA-F*01:01:01:03,HLA-F*01:01:01:04,HLA-F*01:01:01:05,HLA-F*01:01:01:06,HLA-F*01:01:01:07,HLA-F*01:01:01:08,HLA-F*01:01:01:09,HLA-F*01:01:01:10,HLA-F*01:01:01:11,HLA-F*01:01:01:12,HLA-F*01:01:01:13,HLA-F*01:01:01:14,HLA-F*01:01:01:15,HLA-F*01:01:01:16,HLA-F*01:01:01:17,HLA-F*01:01:01:18,HLA-F*01:01:01:19,HLA-F*01:01:01:20,HLA-F*01:01:01:21,HLA-F*01:01:01:22,HLA-F*01:01:01:23,HLA-F*01:01:01:24,HLA-F*01:01:01:25,HLA-F*01:01:01:26,HLA-F*01:01:01:27,HLA-F*01:01:01:28,HLA-F*01:01:01:29,HLA-F*01:01:01:30,HLA-F*01:01:01:31,HLA-F*01:01:01:32,HLA-F*01:01:01:33,HLA-F*01:01:01:34,HLA-F*01:01:01:35,HLA-F*01:01:01:36,HLA-F*01:01:01:37,HLA-F*01:01:01:38,HLA-F*01:01:01:39,HLA-F*01:01:01:40,HLA-F*01:01:01:41,HLA-F*01:01:01:42,HLA-F*01:01:01:43,HLA-F*01:01:01:44,HLA-F*01:01:01:45,HLA-F*01:01:01:46,HLA-F*01:01:01:47,HLA-F*01:01:01:48,HLA-F*01:01:01:49,HLA-F*01:01:01:50,HLA-F*01:01:01:51,HLA-F*01:01:01:52,HLA-F*01:01:01:53,HLA-F*01:01:01:54,HLA-F*01:01:01:55,HLA-F*01:01:01:56,HLA-F*01:01:01:57,HLA-F*01:01:01:58", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29803918, "end": 29805820, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:01", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:01:01:01", "alleles": "HLA-V*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29812001, "end": 29814931, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:new", "alleles": "HLA-P*02:01:01:01,HLA-P*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29839598, "end": 29842735, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:01:22:04", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:new", "alleles": "HLA-G*01:01:22:01,HLA-G*01:01:22:02,HLA-G*01:01:22:03,HLA-G*01:01:22:04,HLA-G*01:01:22:05,HLA-G*01:01:22:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29893324, "end": 29896815, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*02:03:02:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*02:03:02:01", "alleles": "HLA-H*02:03:02:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29901733, "end": 29904218, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*02:01:01:02", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*02:01:01:new", "alleles": "HLA-T*02:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29931883, "end": 29935439, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:01:01:04", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:01:new", "alleles": "HLA-K*01:01:01:04", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29938020, "end": 29938605, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:02", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:new", "alleles": "HLA-U*01:01:01:01,HLA-U*01:01:01:02", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "HG04115#2#JBHDTG010000049.1", "start": 29946100, "end": 29949617, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*74:02:01:02", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*74:02:01:02", "alleles": "HLA-A*74:02:01:02", "template_warning": "NA" } 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} ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG04160#2#JBHIGX010000055.1", "start": 31340461, "end": 31344764, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*01:02:01:01", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*01:02:01:01", "alleles": "HLA-C*01:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG04160#2#JBHIGX010000055.1", "start": 31423483, "end": 31427576, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*15:08:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*15:08:01:01", "alleles": "HLA-B*15:08:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", "contig": 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"gene_id": "IAG000034", "transcript_id": "IAT000034", "gene_name": "HLA-N", "consensus": "HLA-N*01:01:01:new", "alleles": "HLA-N*01:01:01:01,HLA-N*01:01:01:02,HLA-N*01:01:01:03,HLA-N*01:01:01:04,HLA-N*01:01:01:05", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000026", "gene": "HLA-E", "contig": "HG02155#2#CM091924.1", "start": 30503496, "end": 30507317, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000026", "template_allele": "HLA-E*01:01:01:03", "gene_name": "HLA-E" }, "transcripts": [ { "gene_id": "IAG000026", "transcript_id": "IAT000026", "gene_name": "HLA-E", "consensus": "HLA-E*01:01:01:03", "alleles": "HLA-E*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "HG02155#2#CM091924.1", "start": 31282559, "end": 31286861, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*15:02:01:01", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*15:02:01:01", "alleles": "HLA-C*15:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG02155#2#CM091924.1", "start": 31367636, "end": 31371718, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*40:02:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*40:02:01:01", "alleles": "HLA-B*40:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", "contig": "HG02155#2#CM091924.1", "start": 31391930, "end": 31392803, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000037", "template_allele": "HLA-S*01:02:01:03", "gene_name": "HLA-S" }, "transcripts": [ { "gene_id": "IAG000037", "transcript_id": "IAT000037", "gene_name": "HLA-S", "consensus": "HLA-S*01:02:01:03", "alleles": "HLA-S*01:02:01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000060", "gene": "MICA", "contig": "HG02155#2#CM091924.1", "start": 31413200, "end": 31425921, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000060", "template_allele": "MICA*027:01:02", "gene_name": "MICA" }, "transcripts": [ { "gene_id": "IAG000060", "transcript_id": "IAT000060", "gene_name": "MICA", "consensus": "MICA*027:01:02", "alleles": "MICA*027:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG02155#2#CM091924.1", "start": 31508442, "end": 31521264, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*005:02:32", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*005:02:new", "alleles": 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"NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "HG02155#2#CM091924.1", "start": 32767728, "end": 32775094, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:15", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:new", "alleles": "HLA-DQB2*01:01:01:01,HLA-DQB2*01:01:01:02,HLA-DQB2*01:01:01:03,HLA-DQB2*01:01:01:04,HLA-DQB2*01:01:01:05,HLA-DQB2*01:01:01:06,HLA-DQB2*01:01:01:07,HLA-DQB2*01:01:01:08,HLA-DQB2*01:01:01:09,HLA-DQB2*01:01:01:10,HLA-DQB2*01:01:01:11,HLA-DQB2*01:01:01:12,HLA-DQB2*01:01:01:13,HLA-DQB2*01:01:01:14,HLA-DQB2*01:01:01:15,HLA-DQB2*01:01:01:16,HLA-DQB2*01:01:01:17,HLA-DQB2*01:01:01:18", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "HG02155#2#CM091924.1", "start": 32823988, "end": 32828773, "strand": "-", "source": 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] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "HG02155#2#CM091924.1", "start": 32856431, "end": 32865700, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:01:01:01", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:01", "alleles": "TAP1*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "HG02155#2#CM091924.1", "start": 32946170, "end": 32952460, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:02:01:01", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:02:01:new", "alleles": "HLA-DMB*01:02:01:01,HLA-DMB*01:02:01:02,HLA-DMB*01:02:01:03,HLA-DMB*01:02:01:04,HLA-DMB*01:02:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG02155#2#CM091924.1", "start": 32959808, "end": 32964817, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:03", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:03", "alleles": "HLA-DMA*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "HG02155#2#CM091924.1", "start": 33017621, "end": 33021273, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:02:15", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:02:new", "alleles": 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"NA" } ] }, { "gene_id": "IAG000061", "gene": "MICB", "contig": "HG02165#1#CM087444.1", "start": 31500326, "end": 31513148, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000061", "template_allele": "MICB*005:02:32", "gene_name": "MICB" }, "transcripts": [ { "gene_id": "IAG000061", "transcript_id": "IAT000061", "gene_name": "MICB", "consensus": "MICB*005:02:new", "alleles": 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"template_allele": "HLA-DMB*01:03:01:03", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:03:01:new", "alleles": "HLA-DMB*01:03:01:01,HLA-DMB*01:03:01:02,HLA-DMB*01:03:01:03,HLA-DMB*01:03:01:04,HLA-DMB*01:03:01:05,HLA-DMB*01:03:01:06,HLA-DMB*01:03:01:07,HLA-DMB*01:03:01:08,HLA-DMB*01:03:01:09,HLA-DMB*01:03:01:10,HLA-DMB*01:03:01:11,HLA-DMB*01:03:01:12,HLA-DMB*01:03:01:13,HLA-DMB*01:03:01:14,HLA-DMB*01:03:01:15,HLA-DMB*01:03:01:16,HLA-DMB*01:03:01:17,HLA-DMB*01:03:01:18,HLA-DMB*01:03:01:19,HLA-DMB*01:03:01:20,HLA-DMB*01:03:01:21,HLA-DMB*01:03:01:22,HLA-DMB*01:03:01:23", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "HG02391#2#CM087613.1", "start": 32918010, "end": 32923019, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:03", "gene_name": "HLA-DMA" }, "transcripts": [ { 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"template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "HG02391#2#CM087613.1", "start": 33034106, "end": 33043880, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*01:03:01:01", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*01:03:01:01", "alleles": "HLA-DPA1*01:03:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "HG02391#2#CM087613.1", "start": 33045463, "end": 33056994, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*02:01:02:11", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*02:01:02:11", "alleles": "HLA-DPB1*02:01:02:11", "template_warning": "NA" } ] }, { "gene_id": 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[ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*00801new", "alleles": "KIR2DL4*0080101,KIR2DL4*0080105,KIR2DL4*0080106,KIR2DL4*0080107,KIR2DL4*0080108", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", "contig": "HG02391#2#CM087622.1", "start": 60048925, "end": 60063466, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000055", "template_allele": "KIR3DL1*0010116", "gene_name": "KIR3DL1" }, "transcripts": [ { "gene_id": "IAG000055", "transcript_id": "IAT000055", "gene_name": "KIR3DL1", "consensus": "KIR3DL1*00101new", "alleles": "KIR3DL1*0010101,KIR3DL1*0010102,KIR3DL1*0010103,KIR3DL1*0010104,KIR3DL1*0010105,KIR3DL1*0010106,KIR3DL1*0010107,KIR3DL1*0010108,KIR3DL1*0010109,KIR3DL1*0010110,KIR3DL1*0010111,KIR3DL1*0010112,KIR3DL1*0010113,KIR3DL1*0010114,KIR3DL1*0010115,KIR3DL1*0010116,KIR3DL1*0010117,KIR3DL1*0010118,KIR3DL1*0010119", "template_warning": "NA" } ] }, { 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG02392#2#CM099896.1", "start": 57056203, "end": 57060442, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG02392#2#CM099896.1", "start": 57073488, "end": 57084664, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0010201", "alleles": "KIR2DL4*0010201", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", "contig": "HG02392#2#CM099896.1", "start": 57086381, "end": 57100929, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000055", "template_allele": "KIR3DL1*0150204", "gene_name": "KIR3DL1" }, "transcripts": [ { "gene_id": "IAG000055", "transcript_id": "IAT000055", "gene_name": "KIR3DL1", "consensus": "KIR3DL1*0150204", "alleles": "KIR3DL1*0150204", "template_warning": "NA" } ] }, { "gene_id": "IAG000053", "gene": "KIR2DS4", "contig": "HG02392#2#CM099896.1", "start": 57102648, "end": 57118739, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000053", "template_allele": "KIR2DS4*0010102", "gene_name": "KIR2DS4" }, "transcripts": [ { "gene_id": "IAG000053", "transcript_id": "IAT000053", "gene_name": "KIR2DS4", "consensus": "KIR2DS4*00101new", "alleles": "KIR2DS4*0010101,KIR2DS4*0010102,KIR2DS4*0010104,KIR2DS4*0010105,KIR2DS4*0010106,KIR2DS4*0010107,KIR2DS4*0010108,KIR2DS4*0010109", "template_warning": "NA" } ] }, { "gene_id": 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"transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*12:02:02:01", "alleles": "HLA-C*12:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "HG03742#1#CM087628.1", "start": 31357706, "end": 31361560, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*52:01:01:01", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*52:01:01:01", "alleles": "HLA-B*52:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000037", "gene": "HLA-S", "contig": "HG03742#1#CM087628.1", "start": 31385902, "end": 31386775, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000037", "template_allele": "HLA-S*01:02:01:03", "gene_name": "HLA-S" }, "transcripts": [ { "gene_id": "IAG000037", "transcript_id": "IAT000037", 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "HG03784#2#CM094210.1", "start": 56616077, "end": 56620316, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "HG03784#2#CM094210.1", "start": 56633362, "end": 56644538, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0010201", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0010201", "alleles": "KIR2DL4*0010201", "template_warning": "NA" } ] }, { "gene_id": "IAG000055", "gene": "KIR3DL1", 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"transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:02:02:14", "alleles": "HLA-DRA*01:02:02:14", "template_warning": "NA" } ] }, { "gene_id": "IAG000019", "gene": "HLA-DRB3", "contig": "NA18565#2#CM094342.1", "start": 32431857, "end": 32444768, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000019", "template_allele": "HLA-DRB3*03:01:03:02", "gene_name": "HLA-DRB3" }, "transcripts": [ { "gene_id": "IAG000019", "transcript_id": "IAT000019", "gene_name": "HLA-DRB3", "consensus": "HLA-DRB3*03:01:03:02", "alleles": "HLA-DRB3*03:01:03:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "NA18565#2#CM094342.1", "start": 32495482, "end": 32509336, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*12:02:01:03", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": 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"IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00402new", "alleles": "KIR3DL3*0040201,KIR3DL3*0040202,KIR3DL3*0040203,KIR3DL3*0040204", "template_warning": "NA" } ] }, { "gene_id": "IAG000051", "gene": "KIR2DS2", "contig": "NA18565#2#JBIRDY010000037.1", "start": 57281609, "end": 57296155, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000051", "template_allele": "KIR2DS2*0010110", "gene_name": "KIR2DS2" }, "transcripts": [ { "gene_id": "IAG000051", "transcript_id": "IAT000051", "gene_name": "KIR2DS2", "consensus": "KIR2DS2*00101new", "alleles": 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"consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "NA18565#2#JBIRDY010000037.1", "start": 57345762, "end": 57360719, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130111", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*01301new", "alleles": 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] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "NA18565#2#JBIRDY010000037.1", "start": 57390976, "end": 57405695, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*0020103", "alleles": "KIR2DS1*0020103", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "NA18565#2#JBIRDY010000037.1", "start": 57407332, "end": 57424356, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0020114", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00201new", "alleles": 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} ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "NA18570#1#CM087659.1", "start": 32736316, "end": 32741101, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:28", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:28", "alleles": "HLA-DOB*01:01:01:28", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "NA18570#1#CM087659.1", "start": 32752571, "end": 32762205, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:05:01:03", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:05:01:03", "alleles": "TAP2*01:05:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "NA18608#2#CM089858.1", "start": 56942596, "end": 56946835, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*00302new", "alleles": "KIR3DP1*0030201,KIR3DP1*0030202,KIR3DP1*0030203,KIR3DP1*0030204,KIR3DP1*0030205,KIR3DP1*0030206,KIR3DP1*0030207,KIR3DP1*0030208,KIR3DP1*0030209,KIR3DP1*0030210,KIR3DP1*0030211,KIR3DP1*0030212,KIR3DP1*0030213,KIR3DP1*0030214,KIR3DP1*0030215,KIR3DP1*0030216,KIR3DP1*0030217,KIR3DP1*0030218,KIR3DP1*0030219,KIR3DP1*0030220,KIR3DP1*0030221", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "NA18608#2#CM089858.1", "start": 56959892, "end": 56971034, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { 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"template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "NA18608#2#CM089858.1", "start": 57000788, "end": 57016035, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*00201new", "alleles": "KIR2DS5*0020101,KIR2DS5*0020102,KIR2DS5*0020103,KIR2DS5*0020104,KIR2DS5*0020105,KIR2DS5*0020106,KIR2DS5*0020107,KIR2DS5*0020108,KIR2DS5*0020109,KIR2DS5*0020110,KIR2DS5*0020111,KIR2DS5*0020112,KIR2DS5*0020113,KIR2DS5*0020114,KIR2DS5*0020115,KIR2DS5*0020116,KIR2DS5*0020117,KIR2DS5*0020118,KIR2DS5*0020119,KIR2DS5*0020120,KIR2DS5*0020121,KIR2DS5*0020122,KIR2DS5*0020123,KIR2DS5*0020124,KIR2DS5*0020125,KIR2DS5*0020126,KIR2DS5*0020127,KIR2DS5*0020128,KIR2DS5*0020129,KIR2DS5*0020130,KIR2DS5*0020131,KIR2DS5*0020132,KIR2DS5*0020133", "template_warning": "NA" } ] }, { 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57402764, "end": 57407003, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57420060, "end": 57431202, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*0050101", "alleles": "KIR2DL4*0050101", "template_warning": "NA" } ] }, { "gene_id": "IAG000059", "gene": "KIR3DS1", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57432707, "end": 57447850, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000059", "template_allele": "KIR3DS1*0130101", "gene_name": "KIR3DS1" }, "transcripts": [ { "gene_id": "IAG000059", "transcript_id": "IAT000059", "gene_name": "KIR3DS1", "consensus": "KIR3DS1*01301new", "alleles": "KIR3DS1*0130101,KIR3DS1*0130102,KIR3DS1*0130103,KIR3DS1*0130104,KIR3DS1*0130105,KIR3DS1*0130106,KIR3DS1*0130107,KIR3DS1*0130108,KIR3DS1*0130109,KIR3DS1*0130110,KIR3DS1*0130111,KIR3DS1*0130112,KIR3DS1*0130113,KIR3DS1*0130114,KIR3DS1*0130115,KIR3DS1*0130116,KIR3DS1*0130117,KIR3DS1*0130118,KIR3DS1*0130119,KIR3DS1*0130120,KIR3DS1*0130121,KIR3DS1*0130122,KIR3DS1*0130123,KIR3DS1*0130124,KIR3DS1*0130125,KIR3DS1*0130126,KIR3DS1*0130127,KIR3DS1*0130128,KIR3DS1*0130129,KIR3DS1*0130130,KIR3DS1*0130131,KIR3DS1*0130132", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000047", "gene": "KIR2DL5A", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57449589, "end": 57458961, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000047", "template_allele": "KIR2DL5A*0010105", "gene_name": "KIR2DL5A" }, "transcripts": [ { "gene_id": "IAG000047", "transcript_id": "IAT000047", "gene_name": "KIR2DL5A", "consensus": "KIR2DL5A*0010105", "alleles": "KIR2DL5A*0010105", "template_warning": "NA" } ] }, { "gene_id": "IAG000054", "gene": "KIR2DS5", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57460956, "end": 57476203, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000054", "template_allele": "KIR2DS5*0020111", "gene_name": "KIR2DS5" }, "transcripts": [ { "gene_id": "IAG000054", "transcript_id": "IAT000054", "gene_name": "KIR2DS5", "consensus": "KIR2DS5*0020111", "alleles": "KIR2DS5*0020111", "template_warning": "NA" } ] }, { "gene_id": "IAG000050", "gene": "KIR2DS1", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57477923, "end": 57492642, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000050", "template_allele": "KIR2DS1*0020103", "gene_name": "KIR2DS1" }, "transcripts": [ { "gene_id": "IAG000050", "transcript_id": "IAT000050", "gene_name": "KIR2DS1", "consensus": "KIR2DS1*0020103", "alleles": "KIR2DS1*0020103", "template_warning": "NA" } ] }, { "gene_id": "IAG000056", "gene": "KIR3DL2", "contig": "NA18620#2#JBHIJV010000063.1", "start": 57494279, "end": 57511301, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000056", "template_allele": "KIR3DL2*0070110", "gene_name": "KIR3DL2" }, "transcripts": [ { "gene_id": "IAG000056", "transcript_id": "IAT000056", "gene_name": "KIR3DL2", "consensus": "KIR3DL2*00701new", "alleles": "KIR3DL2*0070101,KIR3DL2*0070102,KIR3DL2*0070103,KIR3DL2*0070104,KIR3DL2*0070105,KIR3DL2*0070106,KIR3DL2*0070107,KIR3DL2*0070108,KIR3DL2*0070109,KIR3DL2*0070110,KIR3DL2*0070111,KIR3DL2*0070112,KIR3DL2*0070113,KIR3DL2*0070114", "template_warning": "NA" } ] }, { "gene_id": "IAG000029", "gene": "HLA-HFE", "contig": "NA18620#2#JBHIJV010000064.1", "start": 26035756, "end": 26043719, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000029", "template_allele": "HLA-HFE*001:01:02", "gene_name": "HLA-HFE" }, "transcripts": [ { "gene_id": "IAG000029", "transcript_id": "IAT000029", "gene_name": "HLA-HFE", "consensus": "HLA-HFE*001:01:new", "alleles": "HLA-HFE*001:01:01,HLA-HFE*001:01:02,HLA-HFE*001:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000027", "gene": "HLA-F", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29672499, "end": 29676042, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000027", "template_allele": "HLA-F*01:01:06", "gene_name": "HLA-F" }, "transcripts": [ { "gene_id": "IAG000027", "transcript_id": "IAT000027", "gene_name": "HLA-F", "consensus": "HLA-F*01:01:06", "alleles": "HLA-F*01:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000040", "gene": "HLA-V", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29740980, "end": 29742882, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000040", "template_allele": "HLA-V*01:01:01:01", "gene_name": "HLA-V" }, "transcripts": [ { "gene_id": "IAG000040", "transcript_id": "IAT000040", "gene_name": "HLA-V", "consensus": "HLA-V*01:01:01:01", "alleles": "HLA-V*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000035", "gene": "HLA-P", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29749019, "end": 29751949, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000035", "template_allele": "HLA-P*02:01:01:01", "gene_name": "HLA-P" }, "transcripts": [ { "gene_id": "IAG000035", "transcript_id": "IAT000035", "gene_name": "HLA-P", "consensus": "HLA-P*02:01:01:01", "alleles": "HLA-P*02:01:01:01", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000028", "gene": "HLA-G", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29776612, "end": 29779749, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000028", "template_allele": "HLA-G*01:01:01:01", "gene_name": "HLA-G" }, "transcripts": [ { "gene_id": "IAG000028", "transcript_id": "IAT000028", "gene_name": "HLA-G", "consensus": "HLA-G*01:01:01:01", "alleles": "HLA-G*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000030", "gene": "HLA-H", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29830867, "end": 29834364, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000030", "template_allele": "HLA-H*01:01:01:01", "gene_name": "HLA-H" }, "transcripts": [ { "gene_id": "IAG000030", "transcript_id": "IAT000030", "gene_name": "HLA-H", "consensus": "HLA-H*01:01:01:01", "alleles": "HLA-H*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000038", "gene": "HLA-T", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29839297, "end": 29841782, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000038", "template_allele": "HLA-T*01:01:01:05", "gene_name": "HLA-T" }, "transcripts": [ { "gene_id": "IAG000038", "transcript_id": "IAT000038", "gene_name": "HLA-T", "consensus": "HLA-T*01:01:01:05", "alleles": "HLA-T*01:01:01:05", "template_warning": "no-start_codon,no-stop_codon" } ] }, { "gene_id": "IAG000032", "gene": "HLA-K", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29869520, "end": 29873074, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000032", "template_allele": "HLA-K*01:02", "gene_name": "HLA-K" }, "transcripts": [ { "gene_id": "IAG000032", "transcript_id": "IAT000032", "gene_name": "HLA-K", "consensus": "HLA-K*01:02", "alleles": "HLA-K*01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000039", "gene": "HLA-U", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29875655, "end": 29876387, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000039", "template_allele": "HLA-U*01:03", "gene_name": "HLA-U" }, "transcripts": [ { "gene_id": "IAG000039", "transcript_id": "IAT000039", "gene_name": "HLA-U", "consensus": "HLA-U*01:03:00:new", "alleles": "HLA-U*01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000001", "gene": "HLA-A", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29884028, "end": 29887544, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000001", "template_allele": "HLA-A*02:01:01:01", "gene_name": "HLA-A" }, "transcripts": [ { "gene_id": "IAG000001", "transcript_id": "IAT000001", "gene_name": "HLA-A", "consensus": "HLA-A*02:01:01:01", "alleles": "HLA-A*02:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000041", "gene": "HLA-W", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29897881, "end": 29900818, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000041", "template_allele": "HLA-W*03:01:01:01", "gene_name": "HLA-W" }, "transcripts": [ { "gene_id": "IAG000041", "transcript_id": "IAT000041", "gene_name": "HLA-W", "consensus": "HLA-W*03:01:01:01", "alleles": "HLA-W*03:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "NA18620#2#JBHIJV010000064.1", "start": 29948043, "end": 29951586, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:05", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", "transcript_id": "IAT000031", "gene_name": "HLA-J", "consensus": "HLA-J*01:01:01:05", "alleles": "HLA-J*01:01:01:05", "template_warning": "NA" } ] }, { "gene_id": "IAG000033", "gene": "HLA-L", "contig": "NA18620#2#JBHIJV010000064.1", "start": 30201078, "end": 30204843, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000033", "template_allele": "HLA-L*01:03", "gene_name": "HLA-L" }, "transcripts": [ { "gene_id": "IAG000033", "transcript_id": "IAT000033", "gene_name": "HLA-L", "consensus": "HLA-L*01:03", "alleles": "HLA-L*01:03", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000034", "gene": "HLA-N", "contig": "NA18620#2#JBHIJV010000064.1", "start": 30292898, "end": 30293532, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000034", "template_allele": "HLA-N*01:01:01:01", "gene_name": "HLA-N" }, "transcripts": [ { "gene_id": "IAG000034", "transcript_id": "IAT000034", "gene_name": "HLA-N", "consensus": "HLA-N*01:01:01:01", "alleles": "HLA-N*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000026", "gene": "HLA-E", "contig": "NA18620#2#JBHIJV010000064.1", "start": 30430992, "end": 30434813, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000026", "template_allele": "HLA-E*01:01:01:01", "gene_name": "HLA-E" }, "transcripts": [ { "gene_id": "IAG000026", "transcript_id": "IAT000026", "gene_name": "HLA-E", "consensus": "HLA-E*01:01:01:01", "alleles": "HLA-E*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000003", "gene": "HLA-C", "contig": "NA18620#2#JBHIJV010000064.1", "start": 31208223, "end": 31212388, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000003", "template_allele": "HLA-C*04:82:01", "gene_name": "HLA-C" }, "transcripts": [ { "gene_id": "IAG000003", "transcript_id": "IAT000003", "gene_name": "HLA-C", "consensus": "HLA-C*04:81:00:new", "alleles": "HLA-C*04:81", "template_warning": "NA" } ] }, { "gene_id": "IAG000002", "gene": "HLA-B", "contig": "NA18620#2#JBHIJV010000064.1", "start": 31293376, "end": 31296688, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000002", "template_allele": "HLA-B*48:01:01:14", "gene_name": "HLA-B" }, "transcripts": [ { "gene_id": "IAG000002", "transcript_id": "IAT000002", "gene_name": "HLA-B", "consensus": "HLA-B*48:01:01:new", 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"IAG000016", "template_allele": "HLA-DRA*01:02:02:08", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:02:02:new", "alleles": "HLA-DRA*01:02:02:01,HLA-DRA*01:02:02:02,HLA-DRA*01:02:02:03,HLA-DRA*01:02:02:04,HLA-DRA*01:02:02:05,HLA-DRA*01:02:02:06,HLA-DRA*01:02:02:07,HLA-DRA*01:02:02:08,HLA-DRA*01:02:02:09,HLA-DRA*01:02:02:10,HLA-DRA*01:02:02:11,HLA-DRA*01:02:02:12,HLA-DRA*01:02:02:13,HLA-DRA*01:02:02:14,HLA-DRA*01:02:02:15,HLA-DRA*01:02:02:16,HLA-DRA*01:02:02:17,HLA-DRA*01:02:02:19,HLA-DRA*01:02:02:20,HLA-DRA*01:02:02:21", "template_warning": "NA" } ] }, { "gene_id": "IAG000021", "gene": "HLA-DRB5", "contig": "NA18747#2#CM087242.1", "start": 32506834, "end": 32520278, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000021", "template_allele": "HLA-DRB5*01:01:01:02", "gene_name": "HLA-DRB5" }, "transcripts": [ { "gene_id": "IAG000021", "transcript_id": "IAT000021", "gene_name": "HLA-DRB5", "consensus": "HLA-DRB5*01:01:01:02", "alleles": "HLA-DRB5*01:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "NA18747#2#CM087242.1", "start": 32568613, "end": 32579668, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*15:01:01:03", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*15:01:01:03", "alleles": "HLA-DRB1*15:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "NA18747#2#CM087242.1", "start": 32626459, "end": 32632943, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:02:01:03", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:02:01:03", "alleles": "HLA-DQA1*01:02:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "NA18747#2#CM087242.1", "start": 32649771, "end": 32656872, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*06:02:01:01", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*06:02:01:01", "alleles": "HLA-DQB1*06:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "NA18747#2#CM087242.1", "start": 32731739, "end": 32737593, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:01", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:01", "alleles": "HLA-DQA2*01:01:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "NA18747#2#CM087242.1", "start": 32746628, "end": 32753993, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:01:01:01", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:01:01:new", "alleles": "HLA-DQB2*01:01:01:01,HLA-DQB2*01:01:01:02,HLA-DQB2*01:01:01:03,HLA-DQB2*01:01:01:04,HLA-DQB2*01:01:01:05,HLA-DQB2*01:01:01:06,HLA-DQB2*01:01:01:07,HLA-DQB2*01:01:01:08,HLA-DQB2*01:01:01:09,HLA-DQB2*01:01:01:10,HLA-DQB2*01:01:01:11,HLA-DQB2*01:01:01:12,HLA-DQB2*01:01:01:13,HLA-DQB2*01:01:01:14,HLA-DQB2*01:01:01:15,HLA-DQB2*01:01:01:16,HLA-DQB2*01:01:01:17,HLA-DQB2*01:01:01:18", "template_warning": "NA" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "NA18747#2#CM087242.1", "start": 32801519, "end": 32806303, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:02:01:01", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:02:01:01", "alleles": "HLA-DOB*01:02:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "NA18747#2#CM087242.1", "start": 32817798, "end": 32827433, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:01:05:02", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:01:05:02", "alleles": "TAP2*01:01:05:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "NA18747#2#CM087242.1", "start": 32833988, "end": 32843257, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:01:01:03", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:03", "alleles": "TAP1*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "NA18747#2#CM087242.1", "start": 32923741, "end": 32930031, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:03:01:09", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:03:01:09", "alleles": "HLA-DMB*01:03:01:09", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "NA18747#2#CM087242.1", "start": 32937378, "end": 32942390, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:02", 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"KIR3DL3*01001new", "alleles": "KIR3DL3*01001", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "NA18747#2#CM087250.1", "start": 58296817, "end": 58311575, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010107", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "NA18747#2#CM087250.1", "start": 58313278, "end": 58326403, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": "KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "NA18747#2#CM087250.1", "start": 58328105, "end": 58342845, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030207", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": 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"MICB*005:02:01,MICB*005:02:03,MICB*005:02:04,MICB*005:02:05,MICB*005:02:06,MICB*005:02:07,MICB*005:02:08,MICB*005:02:09,MICB*005:02:10,MICB*005:02:11,MICB*005:02:12,MICB*005:02:13,MICB*005:02:14,MICB*005:02:15,MICB*005:02:16,MICB*005:02:17,MICB*005:02:18,MICB*005:02:19,MICB*005:02:20,MICB*005:02:21,MICB*005:02:22,MICB*005:02:23,MICB*005:02:24,MICB*005:02:25,MICB*005:02:26,MICB*005:02:27,MICB*005:02:28,MICB*005:02:29,MICB*005:02:30,MICB*005:02:31,MICB*005:02:32,MICB*005:02:33,MICB*005:02:34,MICB*005:02:35,MICB*005:02:36,MICB*005:02:37,MICB*005:02:38,MICB*005:02:39,MICB*005:02:40,MICB*005:02:41,MICB*005:02:42,MICB*005:02:43,MICB*005:02:44,MICB*005:02:45,MICB*005:02:46,MICB*005:02:47,MICB*005:02:48,MICB*005:02:49,MICB*005:02:50,MICB*005:02:51,MICB*005:02:52,MICB*005:02:53,MICB*005:02:54,MICB*005:02:55,MICB*005:02:56,MICB*005:02:57,MICB*005:02:58,MICB*005:02:59", "template_warning": "NA" } ] }, { "gene_id": "IAG000064", "gene": "C4AL", "contig": "NA18970#1#CM101469.1", "start": 31900007, "end": 31920630, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000064", "gene_name": "C4AL" }, "transcripts": [ { "gene_id": "IAG000064", "transcript_id": "IAT000064", "gene_name": "C4AL", "pipetide_key": "ProCysLeuAsp" } ] }, { "gene_id": "IAG000065", "gene": "C4BL", "contig": "NA18970#1#CM101469.1", "start": 31932745, "end": 31953368, "strand": "+", "source": "RefSeq", "attributes": { "gene_id": "IAG000065", "gene_name": "C4BL" }, "transcripts": [ { "gene_id": "IAG000065", "transcript_id": "IAT000065", "gene_name": "C4BL", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "NA18970#1#CM101469.1", "start": 32357474, "end": 32363184, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:01", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:01", "alleles": "HLA-DRA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000019", "gene": "HLA-DRB3", "contig": "NA18970#1#CM101469.1", "start": 32410417, "end": 32423220, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000019", "template_allele": "HLA-DRB3*02:02:01:11", "gene_name": "HLA-DRB3" }, "transcripts": [ { "gene_id": "IAG000019", "transcript_id": "IAT000019", "gene_name": "HLA-DRB3", "consensus": "HLA-DRB3*02:02:01:new", "alleles": "HLA-DRB3*02:02:01:new", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "NA18970#1#CM101469.1", "start": 32473855, "end": 32487693, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*14:05:01:02", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*14:05:01:new", "alleles": "HLA-DRB1*14:05:01:01,HLA-DRB1*14:05:01:02,HLA-DRB1*14:05:01:03,HLA-DRB1*14:05:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "NA18970#1#CM101469.1", "start": 32530806, "end": 32537289, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*01:04:01:01", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*01:04:01:01", "alleles": "HLA-DQA1*01:04:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "NA18970#1#CM101469.1", "start": 32554146, "end": 32561234, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*05:03:01:02", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*05:03:01:02", "alleles": "HLA-DQB1*05:03:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "NA18970#1#CM101469.1", "start": 32635040, "end": 32640435, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:01:04", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:01:new", "alleles": "HLA-DQA2*01:01:01:01,HLA-DQA2*01:01:01:02,HLA-DQA2*01:01:01:03,HLA-DQA2*01:01:01:04,HLA-DQA2*01:01:01:05,HLA-DQA2*01:01:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000015", "gene": "HLA-DQB2", "contig": "NA18970#1#CM101469.1", "start": 32650042, "end": 32657286, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000015", "template_allele": "HLA-DQB2*01:02:04", "gene_name": "HLA-DQB2" }, "transcripts": [ { "gene_id": "IAG000015", "transcript_id": "IAT000015", "gene_name": "HLA-DQB2", "consensus": "HLA-DQB2*01:08:00:new", "alleles": "HLA-DQB2*01:08", "template_warning": "no-start_codon" } ] }, { "gene_id": "IAG000007", "gene": "HLA-DOB", "contig": "NA18970#1#CM101469.1", "start": 32706175, "end": 32710960, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000007", "template_allele": "HLA-DOB*01:01:01:01", "gene_name": "HLA-DOB" }, "transcripts": [ { "gene_id": "IAG000007", "transcript_id": "IAT000007", "gene_name": "HLA-DOB", "consensus": "HLA-DOB*01:01:01:01", "alleles": "HLA-DOB*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000063", "gene": "TAP2", "contig": "NA18970#1#CM101469.1", "start": 32722430, "end": 32732060, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000063", "template_allele": "TAP2*01:01:03:11", "gene_name": "TAP2" }, "transcripts": [ { "gene_id": "IAG000063", "transcript_id": "IAT000063", "gene_name": "TAP2", "consensus": "TAP2*01:01:03:new", "alleles": "TAP2*01:01:03:01,TAP2*01:01:03:02,TAP2*01:01:03:03,TAP2*01:01:03:04,TAP2*01:01:03:05,TAP2*01:01:03:06,TAP2*01:01:03:07,TAP2*01:01:03:08,TAP2*01:01:03:09,TAP2*01:01:03:10,TAP2*01:01:03:11,TAP2*01:01:03:12,TAP2*01:01:03:13,TAP2*01:01:03:14,TAP2*01:01:03:15,TAP2*01:01:03:16,TAP2*01:01:03:17,TAP2*01:01:03:18,TAP2*01:01:03:19,TAP2*01:01:03:20,TAP2*01:01:03:21", "template_warning": "NA" } ] }, { "gene_id": "IAG000062", "gene": "TAP1", "contig": "NA18970#1#CM101469.1", "start": 32738827, "end": 32747523, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000062", "template_allele": "TAP1*01:05", "gene_name": "TAP1" }, "transcripts": [ { "gene_id": "IAG000062", "transcript_id": "IAT000062", "gene_name": "TAP1", "consensus": "TAP1*01:01:01:new", "alleles": "TAP1*01:01:01:01,TAP1*01:01:01:02,TAP1*01:01:01:03,TAP1*01:01:01:04,TAP1*01:01:01:05,TAP1*01:01:01:06", "template_warning": "NA" } ] }, { "gene_id": "IAG000005", "gene": "HLA-DMB", "contig": "NA18970#1#CM101469.1", "start": 32828021, "end": 32834760, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000005", "template_allele": "HLA-DMB*01:03:01:03", "gene_name": "HLA-DMB" }, "transcripts": [ { "gene_id": "IAG000005", "transcript_id": "IAT000005", "gene_name": "HLA-DMB", "consensus": "HLA-DMB*01:03:01:new", "alleles": "HLA-DMB*01:03:01:01,HLA-DMB*01:03:01:02,HLA-DMB*01:03:01:03,HLA-DMB*01:03:01:04,HLA-DMB*01:03:01:05,HLA-DMB*01:03:01:06,HLA-DMB*01:03:01:07,HLA-DMB*01:03:01:08,HLA-DMB*01:03:01:09,HLA-DMB*01:03:01:10,HLA-DMB*01:03:01:11,HLA-DMB*01:03:01:12,HLA-DMB*01:03:01:13,HLA-DMB*01:03:01:14,HLA-DMB*01:03:01:15,HLA-DMB*01:03:01:16,HLA-DMB*01:03:01:17,HLA-DMB*01:03:01:18,HLA-DMB*01:03:01:19,HLA-DMB*01:03:01:20,HLA-DMB*01:03:01:21,HLA-DMB*01:03:01:22,HLA-DMB*01:03:01:23", "template_warning": "NA" } ] }, { "gene_id": "IAG000004", "gene": "HLA-DMA", "contig": "NA18970#1#CM101469.1", "start": 32842005, "end": 32847014, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000004", "template_allele": "HLA-DMA*01:01:01:03", "gene_name": "HLA-DMA" }, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:03", "alleles": "HLA-DMA*01:01:01:03", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "NA18970#1#CM101469.1", "start": 32899805, "end": 32903457, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:01:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:01:01", "alleles": "HLA-DOA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "NA18970#1#CM101469.1", "start": 32957713, "end": 32967502, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*02:02:02:01", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*02:02:02:01", "alleles": "HLA-DPA1*02:02:02:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "NA18970#1#CM101469.1", "start": 32969085, "end": 32980550, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*05:01:01:01", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*05:01:01:01", "alleles": "HLA-DPB1*05:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "NA18970#1#CM101469.1", "start": 32984492, "end": 32991243, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:02", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:new", "alleles": "HLA-DPA2*01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "NA18970#1#CM101469.1", "start": 33005169, "end": 33023005, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:02", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:02:00:new", "alleles": "HLA-DPB2*03:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000057", "gene": "KIR3DL3", "contig": "NA18970#1#JBKABU010000019.1", "start": 58424998, "end": 58437361, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000057", "template_allele": "KIR3DL3*00802", "gene_name": "KIR3DL3" }, "transcripts": [ { "gene_id": "IAG000057", "transcript_id": "IAT000057", "gene_name": "KIR3DL3", "consensus": "KIR3DL3*00801new", "alleles": "KIR3DL3*00801", "template_warning": "NA" } ] }, { "gene_id": "IAG000045", "gene": "KIR2DL3", "contig": "NA18970#1#JBKABU010000019.1", "start": 58439004, "end": 58453776, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000045", "template_allele": "KIR2DL3*0010101", "gene_name": "KIR2DL3" }, "transcripts": [ { "gene_id": "IAG000045", "transcript_id": "IAT000045", "gene_name": "KIR2DL3", "consensus": "KIR2DL3*00101new", "alleles": "KIR2DL3*0010101,KIR2DL3*0010102,KIR2DL3*0010103,KIR2DL3*0010104,KIR2DL3*0010105,KIR2DL3*0010106,KIR2DL3*0010107,KIR2DL3*0010108,KIR2DL3*0010109,KIR2DL3*0010110,KIR2DL3*0010111,KIR2DL3*0010112,KIR2DL3*0010113,KIR2DL3*0010114,KIR2DL3*0010115", "template_warning": "NA" } ] }, { "gene_id": "IAG000049", "gene": "KIR2DP1", "contig": "NA18970#1#JBKABU010000019.1", "start": 58455479, "end": 58468604, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000049", "template_allele": "KIR2DP1*0020120", "gene_name": "KIR2DP1" }, "transcripts": [ { "gene_id": "IAG000049", "transcript_id": "IAT000049", "gene_name": "KIR2DP1", "consensus": "KIR2DP1*00201new", "alleles": "KIR2DP1*0020101,KIR2DP1*0020102,KIR2DP1*0020103,KIR2DP1*0020104,KIR2DP1*0020105,KIR2DP1*0020106,KIR2DP1*0020107,KIR2DP1*0020108,KIR2DP1*0020109,KIR2DP1*0020110,KIR2DP1*0020111,KIR2DP1*0020112,KIR2DP1*0020113,KIR2DP1*0020114,KIR2DP1*0020115,KIR2DP1*0020116,KIR2DP1*0020117,KIR2DP1*0020118,KIR2DP1*0020119,KIR2DP1*0020120,KIR2DP1*0020121,KIR2DP1*0020122,KIR2DP1*0020123,KIR2DP1*0020124,KIR2DP1*0020125,KIR2DP1*0020126,KIR2DP1*0020127", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000043", "gene": "KIR2DL1", "contig": "NA18970#1#JBKABU010000019.1", "start": 58470306, "end": 58485046, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000043", "template_allele": "KIR2DL1*0030204", "gene_name": "KIR2DL1" }, "transcripts": [ { "gene_id": "IAG000043", "transcript_id": "IAT000043", "gene_name": "KIR2DL1", "consensus": "KIR2DL1*00302new", "alleles": 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}, "transcripts": [ { "gene_id": "IAG000042", "transcript_id": "IAT000042", "gene_name": "HLA-Y", "consensus": "HLA-Y*02:01", "alleles": "HLA-Y*02:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000036", "gene": "HLA-R", "contig": "NA19087#2#JBHDXQ010000012.1", "start": 25293929, "end": 25296848, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000036", "template_allele": "HLA-R*01:01:01:01", "gene_name": "HLA-R" }, "transcripts": [ { "gene_id": "IAG000036", "transcript_id": "IAT000036", "gene_name": "HLA-R", "consensus": "HLA-R*01:new", "alleles": "HLA-R*01:01:01:01,HLA-R*01:01:01:02", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000031", "gene": "HLA-J", "contig": "NA19087#2#JBHDXQ010000012.1", "start": 25338330, "end": 25341866, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000031", "template_allele": "HLA-J*01:01:01:09", "gene_name": "HLA-J" }, "transcripts": [ { "gene_id": "IAG000031", 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"template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "NA20905#2#CM087508.1", "start": 33069625, "end": 33076367, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:01:01", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:01:01:new", "alleles": "HLA-DPA2*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "NA20905#2#CM087508.1", "start": 33090297, "end": 33107817, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:01:01:03", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:01:01:new", "alleles": "HLA-DPB2*03:01:01:03", "template_warning": "partial_CDS" } 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"gene_id": "IAG000019", "transcript_id": "IAT000019", "gene_name": "HLA-DRB3", "consensus": "HLA-DRB3*02:02:01:new", "alleles": "HLA-DRB3*02:02:01:new", "template_warning": "NA" } ] }, { "gene_id": "IAG000017", "gene": "HLA-DRB1", "contig": "NA21110#1#CM089667.1", "start": 32469148, "end": 32483066, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000017", "template_allele": "HLA-DRB1*11:04:01:01", "gene_name": "HLA-DRB1" }, "transcripts": [ { "gene_id": "IAG000017", "transcript_id": "IAT000017", "gene_name": "HLA-DRB1", "consensus": "HLA-DRB1*11:04:01:01", "alleles": "HLA-DRB1*11:04:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000012", "gene": "HLA-DQA1", "contig": "NA21110#1#CM089667.1", "start": 32525891, "end": 32532491, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000012", "template_allele": "HLA-DQA1*05:05:01:02", "gene_name": "HLA-DQA1" }, "transcripts": [ { "gene_id": "IAG000012", "transcript_id": "IAT000012", "gene_name": "HLA-DQA1", "consensus": "HLA-DQA1*05:05:01:new", "alleles": "HLA-DQA1*05:05:01:01,HLA-DQA1*05:05:01:02,HLA-DQA1*05:05:01:03,HLA-DQA1*05:05:01:04,HLA-DQA1*05:05:01:05,HLA-DQA1*05:05:01:06,HLA-DQA1*05:05:01:07,HLA-DQA1*05:05:01:08,HLA-DQA1*05:05:01:09,HLA-DQA1*05:05:01:10,HLA-DQA1*05:05:01:11,HLA-DQA1*05:05:01:12,HLA-DQA1*05:05:01:13,HLA-DQA1*05:05:01:14,HLA-DQA1*05:05:01:15,HLA-DQA1*05:05:01:16,HLA-DQA1*05:05:01:17,HLA-DQA1*05:05:01:18,HLA-DQA1*05:05:01:19,HLA-DQA1*05:05:01:20,HLA-DQA1*05:05:01:21,HLA-DQA1*05:05:01:22,HLA-DQA1*05:05:01:23,HLA-DQA1*05:05:01:24,HLA-DQA1*05:05:01:25,HLA-DQA1*05:05:01:26,HLA-DQA1*05:05:01:27,HLA-DQA1*05:05:01:28,HLA-DQA1*05:05:01:29,HLA-DQA1*05:05:01:30,HLA-DQA1*05:05:01:31,HLA-DQA1*05:05:01:32,HLA-DQA1*05:05:01:33,HLA-DQA1*05:05:01:34,HLA-DQA1*05:05:01:35,HLA-DQA1*05:05:01:36,HLA-DQA1*05:05:01:37,HLA-DQA1*05:05:01:38,HLA-DQA1*05:05:01:39,HLA-DQA1*05:05:01:40,HLA-DQA1*05:05:01:41,HLA-DQA1*05:05:01:42,HLA-DQA1*05:05:01:43", "template_warning": "NA" } ] }, { "gene_id": "IAG000014", "gene": "HLA-DQB1", "contig": "NA21110#1#CM089667.1", "start": 32543223, "end": 32550452, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000014", "template_allele": "HLA-DQB1*03:01:01:02", "gene_name": "HLA-DQB1" }, "transcripts": [ { "gene_id": "IAG000014", "transcript_id": "IAT000014", "gene_name": "HLA-DQB1", "consensus": "HLA-DQB1*03:01:01:02", "alleles": "HLA-DQB1*03:01:01:02", "template_warning": "NA" } ] }, { "gene_id": "IAG000013", "gene": "HLA-DQA2", "contig": "NA21110#1#CM089667.1", "start": 32624249, "end": 32629442, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000013", "template_allele": "HLA-DQA2*01:01:02:06", "gene_name": "HLA-DQA2" }, "transcripts": [ { "gene_id": "IAG000013", "transcript_id": "IAT000013", "gene_name": "HLA-DQA2", "consensus": "HLA-DQA2*01:01:02:06", "alleles": "HLA-DQA2*01:01:02:06", "template_warning": "NA" } ] }, { "gene_id": 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"template_warning": "NA" } ] }, { "gene_id": "IAG000058", "gene": "KIR3DP1", "contig": "NA21110#1#CM089675.1", "start": 58928794, "end": 58933033, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000058", "template_allele": "KIR3DP1*0030202", "gene_name": "KIR3DP1" }, "transcripts": [ { "gene_id": "IAG000058", "transcript_id": "IAT000058", "gene_name": "KIR3DP1", "consensus": "KIR3DP1*0030202", "alleles": "KIR3DP1*0030202", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000046", "gene": "KIR2DL4", "contig": "NA21110#1#CM089675.1", "start": 58946090, "end": 58957224, "strand": "+", "source": "IPD-KIR-V2.13.0", "attributes": { "gene_id": "IAG000046", "template_allele": "KIR2DL4*0050101", "gene_name": "KIR2DL4" }, "transcripts": [ { "gene_id": "IAG000046", "transcript_id": "IAT000046", "gene_name": "KIR2DL4", "consensus": "KIR2DL4*00501new", "alleles": 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"IAT000065", "gene_name": "C4BS", "pipetide_key": "LeuSerIleHis" } ] }, { "gene_id": "IAG000016", "gene": "HLA-DRA", "contig": "NA21144#2#JBIRDG010000005.1", "start": 18743782, "end": 18749492, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000016", "template_allele": "HLA-DRA*01:01:01:01", "gene_name": "HLA-DRA" }, "transcripts": [ { "gene_id": "IAG000016", "transcript_id": "IAT000016", "gene_name": "HLA-DRA", "consensus": "HLA-DRA*01:01:01:01", "alleles": "HLA-DRA*01:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000019", "gene": "HLA-DRB3", "contig": "NA21144#2#JBIRDG010000005.1", "start": 18796711, "end": 18809839, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000019", "template_allele": "HLA-DRB3*02:22:01", "gene_name": "HLA-DRB3" }, "transcripts": [ { "gene_id": "IAG000019", "transcript_id": "IAT000019", "gene_name": "HLA-DRB3", "consensus": "HLA-DRB3*02:02:01:new", "alleles": "HLA-DRB3*02:02:01:new", 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}, "transcripts": [ { "gene_id": "IAG000004", "transcript_id": "IAT000004", "gene_name": "HLA-DMA", "consensus": "HLA-DMA*01:01:01:04", "alleles": "HLA-DMA*01:01:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000006", "gene": "HLA-DOA", "contig": "NA21144#2#JBIRDG010000005.1", "start": 19280226, "end": 19283878, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000006", "template_allele": "HLA-DOA*01:01:04:01", "gene_name": "HLA-DOA" }, "transcripts": [ { "gene_id": "IAG000006", "transcript_id": "IAT000006", "gene_name": "HLA-DOA", "consensus": "HLA-DOA*01:01:04:01", "alleles": "HLA-DOA*01:01:04:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000008", "gene": "HLA-DPA1", "contig": "NA21144#2#JBIRDG010000005.1", "start": 19338158, "end": 19347932, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000008", "template_allele": "HLA-DPA1*01:03:01:04", "gene_name": "HLA-DPA1" }, "transcripts": [ { "gene_id": "IAG000008", "transcript_id": "IAT000008", "gene_name": "HLA-DPA1", "consensus": "HLA-DPA1*01:03:01:04", "alleles": "HLA-DPA1*01:03:01:04", "template_warning": "NA" } ] }, { "gene_id": "IAG000010", "gene": "HLA-DPB1", "contig": "NA21144#2#JBIRDG010000005.1", "start": 19349515, "end": 19361040, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000010", "template_allele": "HLA-DPB1*04:01:01:01", "gene_name": "HLA-DPB1" }, "transcripts": [ { "gene_id": "IAG000010", "transcript_id": "IAT000010", "gene_name": "HLA-DPB1", "consensus": "HLA-DPB1*04:01:01:01", "alleles": "HLA-DPB1*04:01:01:01", "template_warning": "NA" } ] }, { "gene_id": "IAG000009", "gene": "HLA-DPA2", "contig": "NA21144#2#JBIRDG010000005.1", "start": 19364992, "end": 19371734, "strand": "-", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000009", "template_allele": "HLA-DPA2*01:01:01:01", "gene_name": "HLA-DPA2" }, "transcripts": [ { "gene_id": "IAG000009", "transcript_id": "IAT000009", "gene_name": "HLA-DPA2", "consensus": "HLA-DPA2*01:01:01:01", "alleles": "HLA-DPA2*01:01:01:01", "template_warning": "partial_CDS" } ] }, { "gene_id": "IAG000011", "gene": "HLA-DPB2", "contig": "NA21144#2#JBIRDG010000005.1", "start": 19385664, "end": 19403184, "strand": "+", "source": "IPD-IMGT/HLA-V3.59.0", "attributes": { "gene_id": "IAG000011", "template_allele": "HLA-DPB2*03:01:01:03", "gene_name": "HLA-DPB2" }, "transcripts": [ { "gene_id": "IAG000011", "transcript_id": "IAT000011", "gene_name": "HLA-DPB2", "consensus": "HLA-DPB2*03:01:01:new", "alleles": "HLA-DPB2*03:01:01:03", "template_warning": "partial_CDS" } ] } ] } ] }