{
  "donor": "NA18608",
  "haplotype": "2",
  "assembly": {
    "sample_id": "NA18608",
    "haplotype": "2",
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    "assembly_method": "hifiasm",
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    "assembly_date": "2024-09",
    "assembly_name": "NA18608_hap2_hprc_r2_v1.0.1",
    "source": "hprc",
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    "assembly": "s3://human-pangenomics/working/HPRC/NA18608/assemblies/release2/NA18608_hap2_hprc_r2_v1.0.1.fa.gz"
  },
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  "indexes": {
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      "sha256": "01175bbc1e37fa472396278a3416f6e41ef015cab836b53823b9145ffac47a3d"
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      "contig": "NA18608#2#JBHIJX010000014.1",
      "start_0based": 29804336,
      "end_exclusive": 33192653,
      "file": "region1.fa.gz",
      "file_sha256": "0e70a5fd72db7d288a9a8a01cf2f5cb060f21d44908c5e7d4615dcd43ad71e38",
      "length": 3388317,
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      "range": "675564246-676626811",
      "compressed_sha256": "589c9866c8ad7adcc0e9c3274abb46b23c05146e27b3cf8082aad8add9c6d560",
      "bytes_downloaded": 1062566,
      "etag": "\"4e8faa0fda9ceb19ddf9948e39548e8d-14\"",
      "sequence_sha256": "4eb8ce24b7f73a68dd3215c2faa2c6cb70ff75e92a6ef4f7475ccd2ba88dbcad"
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  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3518,
      "ambiguous_bases": 0,
      "sequence_sha256": "e22534ab3292ecf0d0a962ef6c228b901453d295a0024a3e0c493112816567bb",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-C",
      "length": 4303,
      "ambiguous_bases": 0,
      "sequence_sha256": "2887f2c930511d34ec5be16e6d70183fd17ebfc0d05dbd4194fc6905a1916460",
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    {
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      "gene": "HLA-B",
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      "ambiguous_bases": 0,
      "sequence_sha256": "080219ee807d6eefd0307839dde1be9f3b90270bb9cc025b9c5617e030faa6a3",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-DRB1",
      "length": 13248,
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      "sequence_sha256": "26622ff8ff83edf1405a2603a3efa517a3e5f59dbbf18347cb1b7e519cd6ba07",
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    {
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      "sequence_sha256": "b8a3cd72fc23d2731e5fcace9c3fd6b22b576cc9fa3bdaf82c1d142a1e4f2b3e",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-DQB1",
      "length": 6628,
      "ambiguous_bases": 0,
      "sequence_sha256": "4c4b90a691159e5e96a20165605e6d7e8b518c8c8fca4f6caa7cb3c9b572ef0b",
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    {
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      "annotation_contig_matches_fai": true
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  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}
