{
  "donor": "HG03784",
  "haplotype": "2",
  "assembly": {
    "sample_id": "HG03784",
    "haplotype": "2",
    "phasing": "hic",
    "assembly_method": "hifiasm",
    "assembly_method_version": "0.19.9",
    "assembly_date": "2024-10",
    "assembly_name": "HG03784_hap2_hprc_r2_v1.0.1",
    "source": "hprc",
    "genbank_accession": "GCA_044165595.1",
    "assembly_md5": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.md5",
    "assembly_fai": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.fai",
    "assembly_gzi": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.gzi",
    "assembly": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz"
  },
  "annotation_sha256": "c716423c0484b0a44232bdd3351d5c21b13eb570df74bf1dbed308a2fec42c5d",
  "indexes": {
    "assembly_fai": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.fai",
      "sha256": "4dabf58070117263838085e65b29b92bc760dc5094906da6cc5ca78c822bc9a4"
    },
    "assembly_gzi": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.gzi",
      "sha256": "4f6fe930ccfc240334e0f9fd67c5dff10d24a49e8fc35e5f8c58c1c3e99006e4"
    },
    "assembly_md5": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap2_hprc_r2_v1.0.1.fa.gz.md5",
      "sha256": "7d5545a7162b14ca14f57d62861d0ec1f55de5eef5e02e8eede51a003ca266a3"
    }
  },
  "status": "indexed_HLA_spans_staged",
  "regions": [
    {
      "contig": "HG03784#2#CM094203.1",
      "start_0based": 29857121,
      "end_exclusive": 33207755,
      "file": "region1.fa.gz",
      "file_sha256": "47b693a3bbe51cd1f6aba2bf778920adc82d7f7b3a12cd593fcc27b6dcb6b021",
      "length": 3350634,
      "ambiguous_bases": 0,
      "range": "144179956-145221948",
      "compressed_sha256": "d147cb6f49552d0d5ec3f72ea91be25c580d7cf415397c96805add8eb3f8ec72",
      "bytes_downloaded": 1041993,
      "etag": "\"0863e17e2e7b5e0c7b80eacbc1bc4beb-14\"",
      "sequence_sha256": "8fd7bbcd923ad15ed3513da58e3b744792e1f6e979d854f46c535caaae5be036"
    }
  ],
  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3517,
      "ambiguous_bases": 0,
      "sequence_sha256": "698dd0a8cee2d050d2bae4533e711fd7290a9f4b0be5e1efc1a38cac44e65f8b",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000003",
      "gene": "HLA-C",
      "length": 4304,
      "ambiguous_bases": 0,
      "sequence_sha256": "bf0739cb6cbfbfddae0f6685c7429d918e96ca2c7c5a9aac20ab6b011747fa14",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000002",
      "gene": "HLA-B",
      "length": 4085,
      "ambiguous_bases": 0,
      "sequence_sha256": "38f41e88d5a5361df383a0ae0fc1f52c07bea756385f435cb29467eb782d3f5a",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000017",
      "gene": "HLA-DRB1",
      "length": 13934,
      "ambiguous_bases": 0,
      "sequence_sha256": "eba7be4b4461113f0f7a71ea26bd54102361a2262cd52bc03ebfe8f895c19732",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000012",
      "gene": "HLA-DQA1",
      "length": 6485,
      "ambiguous_bases": 0,
      "sequence_sha256": "2415e1220c80a722dfe34ba0a61e61227d1ba0f1d6098c5834e809402e6ccd3d",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000014",
      "gene": "HLA-DQB1",
      "length": 7089,
      "ambiguous_bases": 0,
      "sequence_sha256": "8077e2b9ace7bbebbd9f48eb8a78507550348f39ed200922868c301e70e8d6a8",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000008",
      "gene": "HLA-DPA1",
      "length": 9775,
      "ambiguous_bases": 0,
      "sequence_sha256": "14d0a04b04f2d7d840ee3e04dc99c57d32454c47efb522f9380e27eedd1a633a",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000010",
      "gene": "HLA-DPB1",
      "length": 11532,
      "ambiguous_bases": 0,
      "sequence_sha256": "83d9ea4ba962c8ca0371bac228a67ebc394b4e0a7ef291d3fc18605017b68360",
      "annotation_contig_matches_fai": true
    }
  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}