{
  "donor": "HG03784",
  "haplotype": "1",
  "assembly": {
    "sample_id": "HG03784",
    "haplotype": "1",
    "phasing": "hic",
    "assembly_method": "hifiasm",
    "assembly_method_version": "0.19.9",
    "assembly_date": "2024-10",
    "assembly_name": "HG03784_hap1_hprc_r2_v1.0.1",
    "source": "hprc",
    "genbank_accession": "GCA_044166095.1",
    "assembly_md5": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.md5",
    "assembly_fai": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.fai",
    "assembly_gzi": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.gzi",
    "assembly": "s3://human-pangenomics/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz"
  },
  "annotation_sha256": "b6a60f714eb62aa525f4fbfefd39977c215d92334965782831db12a8a50bd30b",
  "indexes": {
    "assembly_fai": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.fai",
      "sha256": "7b63c8f5d1bc8217e3e961408ff29ee2c8991fb6c6d707899098d82a54541356"
    },
    "assembly_gzi": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.gzi",
      "sha256": "b7a36d06a7a347a3a35302726e8f2f1b85865f61ae6ddb6f60df475de8e54215"
    },
    "assembly_md5": {
      "url": "https://human-pangenomics.s3.amazonaws.com/working/HPRC/HG03784/assemblies/release2/HG03784_hap1_hprc_r2_v1.0.1.fa.gz.md5",
      "sha256": "3bf4f4d3a0b194366ea357296387ce0f4e370dde03854198b51de4227f8685a0"
    }
  },
  "status": "indexed_HLA_spans_staged",
  "regions": [
    {
      "contig": "HG03784#1#CM094174.1",
      "start_0based": 29800887,
      "end_exclusive": 33122904,
      "file": "region1.fa.gz",
      "file_sha256": "f4d5cf785c0f3edf4fcfff832669be8d587e8e0d9e79ec5a58e9f6f5112d0df0",
      "length": 3322017,
      "ambiguous_bases": 0,
      "range": "216533796-217575973",
      "compressed_sha256": "69d7651d4bb9910b15f01da8b41ed50012b64ff2e9bf8e0301dd16925d4944b9",
      "bytes_downloaded": 1042178,
      "etag": "\"c1b3143a80064f0354f64ab0da08d0c5-14\"",
      "sequence_sha256": "7201d19391c5147808606213fb3159192369ee87960e47c636c8b8becac0c86d"
    }
  ],
  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3515,
      "ambiguous_bases": 0,
      "sequence_sha256": "1e95c568fb5e9f4178d6ae918b81c7356e258461014b249117ddc562a36092c6",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000003",
      "gene": "HLA-C",
      "length": 4304,
      "ambiguous_bases": 0,
      "sequence_sha256": "dfb94e3045e22deddf3e499418cbe8be5865fcfdb3448246090e74176b7248eb",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000002",
      "gene": "HLA-B",
      "length": 4085,
      "ambiguous_bases": 0,
      "sequence_sha256": "2735382115bf36d47f5ee5ec4011b70f06bdc1a344ec381a0a40e4242a1ab489",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000017",
      "gene": "HLA-DRB1",
      "length": 13669,
      "ambiguous_bases": 0,
      "sequence_sha256": "6ddb2482efd8ca21fa3adae13b9879a9b4e45ff72c100f3184861ed2ac8f00f0",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000012",
      "gene": "HLA-DQA1",
      "length": 6586,
      "ambiguous_bases": 0,
      "sequence_sha256": "2aa033dada8d2ee9da93d0b933212a79a39c72d393449a4a4bee17dbc3cb5dc6",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000014",
      "gene": "HLA-DQB1",
      "length": 7231,
      "ambiguous_bases": 0,
      "sequence_sha256": "69dbbd3d503faf16590376d09f8980338f4105b06db0d89b1e983d11e4e18458",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000008",
      "gene": "HLA-DPA1",
      "length": 9757,
      "ambiguous_bases": 0,
      "sequence_sha256": "139ae8cbd17f6a3d7cda216a6c21a1bd59b3a0dd90c76aa205ce1ced93a1ab5b",
      "annotation_contig_matches_fai": true
    },
    {
      "gene_id": "IAG000010",
      "gene": "HLA-DPB1",
      "length": 11516,
      "ambiguous_bases": 0,
      "sequence_sha256": "cf62c3f40bcf14dc1d1492dcd04d419e2c457d426decdafa8fa929d6d474a48c",
      "annotation_contig_matches_fai": true
    }
  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}