{
  "donor": "HG03704",
  "haplotype": "1",
  "assembly": {
    "sample_id": "HG03704",
    "haplotype": "1",
    "phasing": "trio",
    "assembly_method": "hifiasm",
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    "assembly_date": "2024-09",
    "assembly_name": "HG03704_pat_hprc_r2_v1.0.1",
    "source": "hprc",
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    "assembly_fai": "s3://human-pangenomics/working/HPRC/HG03704/assemblies/release2/HG03704_pat_hprc_r2_v1.0.1.fa.gz.fai",
    "assembly_gzi": "s3://human-pangenomics/working/HPRC/HG03704/assemblies/release2/HG03704_pat_hprc_r2_v1.0.1.fa.gz.gzi",
    "assembly": "s3://human-pangenomics/working/HPRC/HG03704/assemblies/release2/HG03704_pat_hprc_r2_v1.0.1.fa.gz"
  },
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  "indexes": {
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      "sha256": "dbce400c899cb33ba47cb1a0ed616368f8cd6cf909090f516e6a1038398facee"
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  "status": "indexed_HLA_spans_staged",
  "regions": [
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      "contig": "HG03704#1#JBHDRL010000035.1",
      "start_0based": 29817226,
      "end_exclusive": 33151547,
      "file": "region1.fa.gz",
      "file_sha256": "32905195e009f2b2325f328aa4f8ec58b8698cf4eab2666e40eb98da8aff1df5",
      "length": 3334321,
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      "range": "658812715-659855647",
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      "bytes_downloaded": 1042933,
      "etag": "\"e482e2da9ba421df68212fa4da6eb14a-14\"",
      "sequence_sha256": "c7ab6e0dc73c5061c789d896b3c5bc1ed8ccf8f67365b379e488001e26bd32ad"
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  ],
  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3503,
      "ambiguous_bases": 0,
      "sequence_sha256": "f45e1341773da7c0e422998dae0351370c663b0791b6af5566eda4a3410ede67",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000003",
      "gene": "HLA-C",
      "length": 4304,
      "ambiguous_bases": 0,
      "sequence_sha256": "dfb94e3045e22deddf3e499418cbe8be5865fcfdb3448246090e74176b7248eb",
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    {
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      "gene": "HLA-B",
      "length": 4081,
      "ambiguous_bases": 0,
      "sequence_sha256": "665c180be52372a1c12a041f9fd375d6ee9dab4c133ffe1001bdd713a5e6b21e",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000017",
      "gene": "HLA-DRB1",
      "length": 13937,
      "ambiguous_bases": 0,
      "sequence_sha256": "ee6962b624077d77cc02d8c001cca9b7fd31358f927be61cb12fb27e0cc80294",
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    {
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      "sequence_sha256": "5c3a0be892f9b8a635c7a84b9adc6292532a472f72565cc771032a4d852c19a3",
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    {
      "gene_id": "IAG000014",
      "gene": "HLA-DQB1",
      "length": 7103,
      "ambiguous_bases": 0,
      "sequence_sha256": "73a510b4ee866544aba377f5b18cd5c93926f811affb2cc482ae94779bb82f85",
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    {
      "gene_id": "IAG000008",
      "gene": "HLA-DPA1",
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      "sequence_sha256": "84a4310af0f27eb13f7ec1cb73523c8ded7afdddb1962995594e99910436eb1a",
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    {
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      "annotation_contig_matches_fai": true
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  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}
