{
  "donor": "HG02027",
  "haplotype": "2",
  "assembly": {
    "sample_id": "HG02027",
    "haplotype": "2",
    "phasing": "trio",
    "assembly_method": "hifiasm",
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    "assembly_date": "2024-09",
    "assembly_name": "HG02027_mat_hprc_r2_v1.0.1",
    "source": "hprc",
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    "assembly": "s3://human-pangenomics/working/HPRC/HG02027/assemblies/release2/HG02027_mat_hprc_r2_v1.0.1.fa.gz"
  },
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  "indexes": {
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      "sha256": "122655539e68da318ec5263674a5b74b20f9a444869a9adb0565895bf91d4f76"
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  "status": "indexed_HLA_spans_staged",
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      "contig": "HG02027#2#JBHDTY010000008.1",
      "start_0based": 3046678,
      "end_exclusive": 6362898,
      "file": "region1.fa.gz",
      "file_sha256": "fb6c6ed7abbdb78bbba545cc231d5ba2125616511efe8cb3e08ceddb900666fb",
      "length": 3316220,
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      "range": "560243260-561285905",
      "compressed_sha256": "96c72958574b02cbc9761ddded40222fb94bf0a54d25eee72cb68f2afa096a58",
      "bytes_downloaded": 1042646,
      "etag": "\"865f57571a4f0132b91b70b5884a9ef8-14\"",
      "sequence_sha256": "857a572594b9b0d982c87515ca1334ba1b1c507be959de241fc2dc5312305cf1"
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  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3517,
      "ambiguous_bases": 0,
      "sequence_sha256": "8a5287ccdcfac947d187ee863f32ca79fb12964e93dce0625e1975c4a1934240",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000003",
      "gene": "HLA-C",
      "length": 4304,
      "ambiguous_bases": 0,
      "sequence_sha256": "85d9c0822a56c05550cd919e1c50f34406a6f17fa5c5700efc14d4a3ada103ff",
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    {
      "gene_id": "IAG000002",
      "gene": "HLA-B",
      "length": 3863,
      "ambiguous_bases": 0,
      "sequence_sha256": "94885c025d21912a43369b1fc6d7233fd4ca0309b1d84bcb923422e5b17734d5",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000017",
      "gene": "HLA-DRB1",
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      "ambiguous_bases": 0,
      "sequence_sha256": "527e844eedb5749f849300b76e7db5c62f641c7a8621a6bb7021c640a199d45e",
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    {
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      "gene": "HLA-DQA1",
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    {
      "gene_id": "IAG000014",
      "gene": "HLA-DQB1",
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      "ambiguous_bases": 0,
      "sequence_sha256": "ad614182d82ae9633cc6d537b457fd30cd62280847e59db1f1a8dc66cba23a08",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-DPA1",
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      "sequence_sha256": "48106b5386016321e339b0360fa83611eb2965ce1c1936bb4af30b7df6bdc486",
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    {
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      "gene": "HLA-DPB1",
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      "annotation_contig_matches_fai": true
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  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}
