{
  "donor": "HG00544",
  "haplotype": "1",
  "assembly": {
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    "phasing": "trio",
    "assembly_method": "hifiasm",
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    "assembly_date": "2024-09",
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    "source": "hprc",
    "genbank_accession": "GCA_042076675.1",
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    "assembly_gzi": "s3://human-pangenomics/working/HPRC/HG00544/assemblies/release2/HG00544_pat_hprc_r2_v1.0.1.fa.gz.gzi",
    "assembly": "s3://human-pangenomics/working/HPRC/HG00544/assemblies/release2/HG00544_pat_hprc_r2_v1.0.1.fa.gz"
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  "indexes": {
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      "sha256": "b4531d0498a2fc537e1caade4d8ccd82813bfbe23fb2080bf5b43e639c46800b"
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  "status": "indexed_HLA_spans_staged",
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      "contig": "HG00544#1#CM089373.1",
      "start_0based": 29818790,
      "end_exclusive": 33242926,
      "file": "region1.fa.gz",
      "file_sha256": "2541d8624d9f41d305db1bd3de41e13f71132601435caf42ce41779141bb17a6",
      "length": 3424136,
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      "range": "197648504-198711410",
      "compressed_sha256": "a9f48307dbd33b2031253a26cce151062698681917795a58cf6bce6ea82fdcbf",
      "bytes_downloaded": 1062907,
      "etag": "\"e1c744df210357fda2f7f4e454f904a7-14\"",
      "sequence_sha256": "2fdefc09c1e46ccddc6bb66aceaef58f50bdbb2dfba560e5fe4a47b08a00df89"
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  "gene_qc": [
    {
      "gene_id": "IAG000001",
      "gene": "HLA-A",
      "length": 3503,
      "ambiguous_bases": 0,
      "sequence_sha256": "f45e1341773da7c0e422998dae0351370c663b0791b6af5566eda4a3410ede67",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000003",
      "gene": "HLA-C",
      "length": 4304,
      "ambiguous_bases": 0,
      "sequence_sha256": "313274a03a602a882d55aeff30a88ffd80b50631d2bf8ce199cf97715c218a3f",
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    {
      "gene_id": "IAG000002",
      "gene": "HLA-B",
      "length": 4094,
      "ambiguous_bases": 0,
      "sequence_sha256": "b89c7d6a41dc1a3b7a316969c49f0ef6b5cdd9393b4fca2dad60e74b23ec1533",
      "annotation_contig_matches_fai": true
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    {
      "gene_id": "IAG000017",
      "gene": "HLA-DRB1",
      "length": 15396,
      "ambiguous_bases": 0,
      "sequence_sha256": "edd68bd414c5e2c14543c5d30faed0898875d4ca0b391a81f546226d0a08a0c6",
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    {
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      "gene": "HLA-DQA1",
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      "ambiguous_bases": 0,
      "sequence_sha256": "74b740ecea794961e73a781c0b55401e8d8eb337df6d75b16389c045fc3811d0",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-DQB1",
      "length": 7126,
      "ambiguous_bases": 0,
      "sequence_sha256": "192c2241a69d51847a5f6821370a0b981e17f3420b79920fc50cfa080d1971b5",
      "annotation_contig_matches_fai": true
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    {
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      "gene": "HLA-DPA1",
      "length": 9816,
      "ambiguous_bases": 0,
      "sequence_sha256": "62639ab1341e18f6567b0049f1348a7b37dd6cc9f5cc48609874264d1776ad47",
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    {
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      "gene": "HLA-DPB1",
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      "annotation_contig_matches_fai": true
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  ],
  "scope": "Annotated HLA spans with 100kb flanks, not a certified complete MHC callable region.",
  "full_assembly_md5_verified": false,
  "local_phasing_and_read_support_validated": false
}
