{
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        "APR021",
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        "APR038",
        "APR040",
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        "NA21144"
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      "HG02029"
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    [
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      "HG02886"
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    [
      "HG03072",
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      "HG03438",
      "HG03464",
      "HG03465",
      "HG03469",
      "HG03470",
      "HG03471",
      "HG03478",
      "HG03479",
      "HG03480",
      "HG03484",
      "HG03485",
      "HG03486"
    ],
    [
      "HG03490",
      "HG03491",
      "HG03492"
    ],
    [
      "HG03514",
      "HG03515",
      "HG03516"
    ],
    [
      "HG03538",
      "HG03539",
      "HG03540"
    ],
    [
      "HG03577",
      "HG03578",
      "HG03579"
    ],
    [
      "HG03652",
      "HG03653",
      "HG03654"
    ],
    [
      "HG03667",
      "HG03668",
      "HG03669"
    ],
    [
      "HG03688",
      "HG03885",
      "HG03886"
    ],
    [
      "HG03702",
      "HG03703",
      "HG03704"
    ],
    [
      "HG03708",
      "HG03709",
      "HG03710"
    ],
    [
      "HG03742"
    ],
    [
      "HG03784",
      "HG03786"
    ],
    [
      "HG03802",
      "HG03803",
      "HG03804"
    ],
    [
      "HG03814",
      "HG03815",
      "HG03816"
    ],
    [
      "HG03829",
      "HG03830",
      "HG03831"
    ],
    [
      "HG03832",
      "HG03833",
      "HG03834"
    ],
    [
      "HG03874",
      "HG03876",
      "HG03879"
    ],
    [
      "HG03925",
      "HG03926",
      "HG03927"
    ],
    [
      "HG03940",
      "HG03941",
      "HG03942"
    ],
    [
      "HG03894",
      "HG03896",
      "HG04115"
    ],
    [
      "NA18876",
      "NA18877",
      "NA18906"
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    [
      "NA18940"
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    [
      "NA18943"
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    [
      "NA18944"
    ],
    [
      "NA18945"
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    [
      "NA18948"
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    [
      "NA18959"
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    [
      "NA18960"
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    [
      "NA18967"
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    [
      "NA18970"
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    [
      "NA18982"
    ],
    [
      "NA18912",
      "NA18913",
      "NA18914",
      "NA19238",
      "NA19239",
      "NA19240"
    ],
    [
      "NA19920",
      "NA19921",
      "NA20129"
    ],
    [
      "NA21309"
    ],
    [
      "APR002",
      "APR030"
    ],
    [
      "APR-F",
      "APR-M",
      "APR-S",
      "APR_F",
      "APR_M",
      "APR_S"
    ],
    [
      "APR52",
      "APR052"
    ],
    [
      "KSA001",
      "KSA002",
      "KSA003",
      "KSA004",
      "KSA005",
      "KSA006",
      "KSA007",
      "KSA008",
      "KSA009"
    ],
    [
      "APR-S",
      "APR-M"
    ]
  ],
  "donors": {
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      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00423": {
      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00438": {
      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00544": {
      "population": "CHS",
      "resource": "HPRC"
    },
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      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00597": {
      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00609": {
      "population": "CHS",
      "resource": "HPRC"
    },
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      "resource": "HPRC"
    },
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      "population": "CHS",
      "resource": "HPRC"
    },
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      "population": "CHS",
      "resource": "HPRC"
    },
    "HG00706": {
      "population": "CHS",
      "resource": "HPRC"
    },
    "HG02015": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02027": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02040": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02056": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02071": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02074": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02080": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02083": {
      "population": "KHV",
      "resource": "HPRC"
    },
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      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02132": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02135": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02155": {
      "population": "CDX",
      "resource": "HPRC"
    },
    "HG02165": {
      "population": "CDX",
      "resource": "HPRC"
    },
    "HG02178": {
      "population": "CDX",
      "resource": "HPRC"
    },
    "HG02391": {
      "population": "CDX",
      "resource": "HPRC"
    },
    "HG02392": {
      "population": "CDX",
      "resource": "HPRC"
    },
    "HG02514": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02523": {
      "population": "KHV",
      "resource": "HPRC"
    },
    "HG02602": {
      "population": "PJL",
      "resource": "HPRC"
    },
    "HG02698": {
      "population": "PJL",
      "resource": "HPRC"
    },
    "HG02735": {
      "population": "PJL",
      "resource": "HPRC"
    },
    "HG02738": {
      "population": "PJL",
      "resource": "HPRC"
    },
    "HG03017": {
      "population": "PJL",
      "resource": "HPRC"
    },
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      "population": "PJL",
      "resource": "HPRC"
    },
    "HG03654": {
      "population": "PJL",
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    },
    "HG03669": {
      "population": "PJL",
      "resource": "HPRC"
    },
    "HG03688": {
      "population": "STU",
      "resource": "HPRC"
    },
    "HG03704": {
      "population": "PJL",
      "resource": "HPRC"
    },
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      "population": "PJL",
      "resource": "HPRC"
    },
    "HG03742": {
      "population": "ITU",
      "resource": "HPRC"
    },
    "HG03784": {
      "population": "ITU",
      "resource": "HPRC"
    },
    "HG03804": {
      "population": "BEB",
      "resource": "HPRC"
    },
    "HG03816": {
      "population": "BEB",
      "resource": "HPRC"
    },
    "HG03831": {
      "population": "BEB",
      "resource": "HPRC"
    },
    "HG03834": {
      "population": "BEB",
      "resource": "HPRC"
    },
    "HG03874": {
      "population": "ITU",
      "resource": "HPRC"
    },
    "HG03927": {
      "population": "BEB",
      "resource": "HPRC"
    },
    "HG03942": {
      "population": "BEB",
      "resource": "HPRC"
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    "HG04115": {
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      "resource": "HPRC"
    },
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      "population": "CHB",
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      "population": "CHB",
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    },
    "NA18747": {
      "population": "CHB",
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    "NA18940": {
      "population": "Japanese (JPT)",
      "resource": "HPRC"
    },
    "NA18943": {
      "population": "Japanese (JPT)",
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    "NA18944": {
      "population": "Japanese (JPT)",
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    "NA18945": {
      "population": "Japanese (JPT)",
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      "population": "Japanese (JPT)",
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      "population": "Japanese (JPT)",
      "resource": "HPRC"
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      "population": "Japanese (JPT)",
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      "population": "Japanese (JPT)",
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      "population": "Japanese (JPT)",
      "resource": "HPRC"
    },
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      "population": "Japanese (JPT)",
      "resource": "HPRC"
    },
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      "population": "Japanese (JPT)",
      "resource": "HPRC"
    },
    "NA18982": {
      "population": "Japanese (JPT)",
      "resource": "HPRC"
    },
    "NA18983": {
      "population": "Japanese (JPT)",
      "resource": "HPRC"
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      "population": "Japanese (JPT)",
      "resource": "HPRC"
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      "population": "GIH",
      "resource": "HPRC"
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      "population": "GIH",
      "resource": "HPRC"
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    "NA20905": {
      "population": "GIH",
      "resource": "HPRC"
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      "population": "GIH",
      "resource": "HPRC"
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      "population": "GIH",
      "resource": "HPRC"
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      "population": "GIH",
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      "population": "GIH",
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    },
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      "population": "GIH",
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR-M": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR-S": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR001": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR002": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR003": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR004": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR005": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR006": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR007": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR008": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR015": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR016": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR018": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR019": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR020": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR021": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR022": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR023": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR024": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR025": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR026": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR027": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR029": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR030": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR031": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR032": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR033": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR034": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR035": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR036": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR037": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR038": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
    },
    "APR039": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR040": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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      "resource": "Arab"
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    "APR043": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR044": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR045": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR046": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR047": {
      "population": "Arab (APR; finer population metadata pending)",
      "resource": "Arab"
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    "APR048": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR049": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR050": {
      "population": "Arab (APR; finer population metadata pending)",
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    "APR051": {
      "population": "Arab (APR; finer population metadata pending)",
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    "KSA001": {
      "population": "Saudi Arabian",
      "resource": "Saudi"
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    "KSA002": {
      "population": "Saudi Arabian",
      "resource": "Saudi"
    },
    "KSA003": {
      "population": "Saudi Arabian",
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    "KSA004": {
      "population": "Saudi Arabian",
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    "KSA005": {
      "population": "Saudi Arabian",
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    "KSA006": {
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    "KSA007": {
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    "KSA008": {
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    "KSA009": {
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  },
  "source_sha256": {
    "/mnt/data1/dogohla/pangenome/scientist/evidence/cohort-family-supplement-20261005/FAMILY_RECONCILIATION.json": "3043d106d4bde89db69e07f3cc4071f4a8086731bb9239582af76a8e2e95b4eb",
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    "/mnt/data1/dogohla/pangenome/scientist/evidence/saudi-native-read-comparison-20261007/RELATIONSHIP_REVIEW.json": "44773033c81f658e0bd80363977f94054d99747e67b2320d156f73c796e2f5e3",
    "/mnt/data1/dogohla/pangenome/scientist/evidence/apr-native-read-comparison-20261008/RELATIONSHIP_REVIEW.json": "230bfb4283ddf27ea2c490d767c9c60a1132ad2504ecd59261a6575d253fb69e",
    "/mnt/data1/dogohla/pangenome/scientist/evidence/apr-extended-native-read-comparison-20261008/RELATIONSHIP_REVIEW.json": "5fb15b72265697f75391749bedc0d4891108771a7ef4d9cefe66fa6c72a54d1a"
  },
  "reference_release": "3.65.0",
  "rules": [
    "Five outer folds; donor/family components kept together; population balancing uses metadata only.",
    "Saudi cohort conservatively kept in one block pending complete relationship review.",
    "Known relatedness screen groups pairs with >=10000 shared sites and relatedness>=0.1; incomplete screens do not certify independence.",
    "No held-out donor contributes sequences, labels, weights, graph paths or parameter tuning. Fixed prior mapper configuration; no tuning on outer-fold results.",
    "This previously exposed cohort supports developmental CV, not an untouched final benchmark.",
    "IPD is a fixed external catalogue; identical sequences independently supplied by training donors are allowed.",
    "Primary typing target is four-field named alleles / exact gene sequence for unnamed alleles; lower-field calls do not count as four-field successes.",
    "Real reads preferred. Simulated reads are a separately labelled experiment and are not generated here."
  ],
  "scientific_admission": false
}