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  },
  "script_sha256": "c43e3fafeb2baac167a82011713a566bff6f909cf7f7a49bddc36fc437a1f84b",
  "limitations": [
    "Assembly-derived truth is inherited from frozen SOURCE_RECORDS and is not independently raw-read validated.",
    "Only finalized hash-bound comparator outputs enter scoring. Missing runs remain availability gaps, never no-calls.",
    "Numeric fields ignore expression suffix; ambiguous labels collapse only when every alternative agrees at requested resolution. No shorter-field padding.",
    "SpecHLA3.65 annotation retains3.38 mapping/binning. OptiType bundled database supports classI two-field. HLA*LA uses historical native graph and current3.65 G-name expansion, not identity-certified historical nomenclature.",
    "HLA*LA G groups ambiguous at2field remain unresolved. Native G output does not support a four-field comparison; no HLA*LA four-field denominator is created. Separate G endpoint compares both methods after current3.65 group projection; shorter names project only when every current descendant agrees on a G group.",
    "Incomplete family metadata uses explicitly reported singleton fallback; fallback does not certify independence.",
    "Family-cluster bootstrap4000 and exact/MonteCarlo family sign-flip from interpretation score_ablation. Exploratory supported-endpoint comparisons; no untouched-test claim."
  ],
  "publication_endpoint_policy": "HLA*LA G endpoint only; numeric2 ambiguity is a resolution diagnostic, not algorithm accuracy."
}
