{
  "status": "complete",
  "donor": "HG04160",
  "fold": 4,
  "scope": "HLA*LA1.0.4 native historical PRG; nomenclature harmonization required; not IPD3.65 matched",
  "truth_loaded": false,
  "plan_sha256": "9a514cf3bada880828b525f8b642a7a4e01a4902b6153a4c746b14d00ab11322",
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  "pairs_receipt_sha256": "2d8e51a47960538dc70626c6939704b735d81cc67eacf13ffe26af01a18c5211",
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  "job_id": "54073115",
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  "graph_index_pin_sha256": "44f94075a543e23de5f287dbdebdf0efb8bd4d6e63f25e7581a5cadb964e99ee",
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  "command": [
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    "exec",
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    "PATH=/usr/local/bin:/usr/bin:/bin,TMPDIR=baseline/hlala/runs/HG04160/tmp,JAVA_TOOL_OPTIONS=-Djava.io.tmpdir=baseline/hlala/runs/HG04160/tmp",
    "--no-home",
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    "baseline:baseline,baseline/graphs:/usr/local/opt/hla-la/src/../graphs",
    "benchmark/hlala-baseline-20261018/hla-la.sif",
    "/usr/local/bin/HLA-LA.pl",
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    "/usr/local/bin/picard",
    "--BAM",
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    "--graph",
    "PRG_MHC_GRCh38_withIMGT",
    "--sampleID",
    "HG04160",
    "--maxThreads",
    "8",
    "--workingDir",
    "baseline/hlala/runs/HG04160/work"
  ],
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    "--bind",
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    "project-runtime/containers/ubuntu24.sif",
    "runtime/mm/envs/asian50-spechla/bin/bwa",
    "mem",
    "-t",
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    "-R",
    "@RG\\tID:HG04160\\tSM:HG04160",
    "benchmark/japanese-fingerprint-alignment-runtime-v1/index/reference.fa",
    "benchmark/MHC-recruitment-remaining26-20261020/HG04160/reads/r1.fq.gz",
    "benchmark/MHC-recruitment-remaining26-20261020/HG04160/reads/r2.fq.gz"
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  "analysis_finalized_at": 1792515740.5470245,
  "validation_recovery": {
    "reason": "valid_named_allele_alternatives",
    "original_worker_status": "failed_after_native_exit0",
    "original_error": "AssertionError('Malformed allele B*07:05:01;B*07:06')",
    "source_failure_sha256": "0ada7445843e466d57d64f8160c513a08d7aa14466c4906dfaaef2fe0a32d501",
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    "native_log_sha256": "e544542ceb0b0bd7f5b8dd9c9e449404da7b1fae1cc487f529008a45cadb751f",
    "truth_loaded": false
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  "private_source_complete_sha256": "6a885ac71ed32a488fadb13c6f1964aac2b35773c6189f7b166c4cd351dcccbe",
  "command_path_policy": "Commands are path-normalized reference templates; runtime/ and benchmark/ inputs are not redistributed.",
  "native_tables": [
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      "sha256": "7ff93b9eb45ea42981263b6ffe448b3b2e5e83309e9bb98241731da0a4e87098",
      "run_receipt_hash_bound": true,
      "public_path": "methods/hlala/donors/HG04160/native/R1_bestguess_G.txt",
      "public_sha256": "7ff93b9eb45ea42981263b6ffe448b3b2e5e83309e9bb98241731da0a4e87098"
    },
    {
      "source_relative_path": "work/HG04160/hla/R1_bestguess.txt",
      "sha256": "362d10d1cb279f573c90ddd4c9f863f4c508475c7093685d84004c350a81b6c8",
      "run_receipt_hash_bound": false,
      "public_path": "methods/hlala/donors/HG04160/native/R1_bestguess.txt",
      "public_sha256": "362d10d1cb279f573c90ddd4c9f863f4c508475c7093685d84004c350a81b6c8"
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}