{
  "status": "complete",
  "donor": "HG02392",
  "fold": 1,
  "scope": "HLA*LA1.0.4 native historical PRG; nomenclature harmonization required; not IPD3.65 matched",
  "truth_loaded": false,
  "plan_sha256": "9a514cf3bada880828b525f8b642a7a4e01a4902b6153a4c746b14d00ab11322",
  "driver_sha256": "f311dd6967b5d8cbd32bd85e969ad59ee9b6d72b93b7041af71d38fc72778e1b",
  "pairs_receipt_sha256": "d8e68f86b2fe34770b799010ab3ae6fe098ba4c5f668f7b5923b3f9d7f2f5e5a",
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  "job_id": "54072899",
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  "graph_index_pin_sha256": "44f94075a543e23de5f287dbdebdf0efb8bd4d6e63f25e7581a5cadb964e99ee",
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  "command": [
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    "exec",
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    "PATH=/usr/local/bin:/usr/bin:/bin,TMPDIR=baseline/hlala/runs/HG02392/tmp,JAVA_TOOL_OPTIONS=-Djava.io.tmpdir=baseline/hlala/runs/HG02392/tmp",
    "--no-home",
    "--bind",
    "baseline:baseline,baseline/graphs:/usr/local/opt/hla-la/src/../graphs",
    "benchmark/hlala-baseline-20261018/hla-la.sif",
    "/usr/local/bin/HLA-LA.pl",
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    "/usr/local/bin/picard",
    "--BAM",
    "baseline/hlala/runs/HG02392/same_pairs.bam",
    "--graph",
    "PRG_MHC_GRCh38_withIMGT",
    "--sampleID",
    "HG02392",
    "--maxThreads",
    "8",
    "--workingDir",
    "baseline/hlala/runs/HG02392/work"
  ],
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    "--cleanenv",
    "--no-home",
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    "project-runtime/containers/ubuntu24.sif",
    "runtime/mm/envs/asian50-spechla/bin/bwa",
    "mem",
    "-t",
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    "-R",
    "@RG\\tID:HG02392\\tSM:HG02392",
    "benchmark/japanese-fingerprint-alignment-runtime-v1/index/reference.fa",
    "benchmark/MHC-recruitment-expansion41-20261018/HG02392/reads/r1.fq.gz",
    "benchmark/MHC-recruitment-expansion41-20261018/HG02392/reads/r2.fq.gz"
  ],
  "analysis_finalized_at": 1792513386.7066824,
  "validation_recovery": {
    "reason": "valid_named_allele_alternatives",
    "original_worker_status": "failed_after_native_exit0",
    "original_error": "AssertionError('Malformed allele DPA1*02:01:01;DPA1*02:01:08')",
    "source_failure_sha256": "c4c8084f84184f25ee044b45fbf2d34a8a8572ad38eacac4a8b54cf6eab3e73c",
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    "validator_job_id": "54079732",
    "native_log_sha256": "c4efadec4910383fa8c9db7d4f879a5c020a514c8fc67a6da2742d626131af9f",
    "truth_loaded": false
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  "private_source_complete_sha256": "3d218732200b7d3492d08204ab555b9eaeadefebb854ada8207b8de4a7a39d70",
  "command_path_policy": "Commands are path-normalized reference templates; runtime/ and benchmark/ inputs are not redistributed.",
  "native_tables": [
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      "sha256": "c99aaf6c518828ca0a290ad921ee2a6dcb6646a1932d07b5339f5584d1a22235",
      "run_receipt_hash_bound": true,
      "public_path": "methods/hlala/donors/HG02392/native/R1_bestguess_G.txt",
      "public_sha256": "c99aaf6c518828ca0a290ad921ee2a6dcb6646a1932d07b5339f5584d1a22235"
    },
    {
      "source_relative_path": "work/HG02392/hla/R1_bestguess.txt",
      "sha256": "112f002bd56b3da553af97781990ee379a1b3ad536684ab77c151a235f507fab",
      "run_receipt_hash_bound": false,
      "public_path": "methods/hlala/donors/HG02392/native/R1_bestguess.txt",
      "public_sha256": "112f002bd56b3da553af97781990ee379a1b3ad536684ab77c151a235f507fab"
    }
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}