{
  "source": "/benchmark/pangenome-reference-cv-20261014/inference-japanese/runs/NA18948/hprc",
  "source_complete_sha256": "609b198b0243b8ab6b7a3dee79a56ac3d59e1087ce451f4503e29f7561c9fca6",
  "source_evidence_sha256": "f1bb680d16d37e3f4ae8187c93d1ada79ad9aae46a747551252bfb4c4b2bc031",
  "code_sha256": {
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    "build_graph.py": "170765c3d0c53b3fc5bc9973016a17195937b9798e191dbacb08db124b94261a",
    "context_fragment.py": "098c19433935309ed05a2e3534ed514660c7af34baa3ce51928c3e6bca5ea6d6",
    "context_inference.py": "cb6007033d7d7320a26d8dc57283438385550949666e64e844363b159b66f7a0",
    "context_read_store.py": "6226eb83e37af78fcea04e17529f7cca8cd8e8b9e470b8ea5b0f5ad8a396eeee",
    "context_runtime_identity.py": "6d132df334e8ff31aeeb724808ed58aa8b7b7c264c97156ef89e9bdf52f115fb",
    "cv_references.py": "db687df88f0bc4e227c9b73242918629b1127d8ac80271c59056d703830ab126",
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    "fragment_support.py": "bbfd8943563acccbb6b5ebda723d4c7cef44ef88a2dd508439cbae28cf52856f",
    "join_evidence.py": "e9e9c5ac6bcb0197436fd6403286595814f669261e5d4caf8069a11b467a4930",
    "joint_model.py": "c2279fd29e12f215e23fdd148fe7a6794b70fe8221d639c69c55e1ae6f87b5e4",
    "run_context_evidence.py": "3e99c6f7b95d4df77ae2598a59860caeb5adf059ce1be60f6a244053b0783d6a",
    "run_context_evidence_disk_v3.py": "779ad5b3833dbdfa074778515bb89dc789a857606204f378225ff888e4a94a9d",
    "run_context_inference.py": "3072b63da055bbd819ff57280e39431d2da611824059458336c0264062f3d6f5",
    "run_context_linear.py": "33ef894cf3a287ec3c52a32da50d50ea3c99f87446ce7c27144c5a6e573d2203",
    "score_native.py": "531340bcca991cd2fac6f563ae557a2882e9f75d5b3d4cd101161dc58a25eee2",
    "sequence_identity.py": "0152f515c50ce66f5dc58ad1442072b0093c247e4eca98949501d869a44cb721",
    "t1k_evidence.py": "b79c8cdf6708bf8f0401adb4a0aa9a73b8251da3543b5d6343382ac02a06b9b6",
    "test_context_inference.py": "2e2e6a2ae2ef5caa3bc2fff812656745f877b6b5100de6050f39babeb0c7ae89"
  },
  "script_sha256": "f1080946e5a29b4b384e0db73a18ca3c6398b41112779c240b85cc69a775285e",
  "native_table_sha256": "98a5cbb7ce47774b4b6cc2b0271f5b53fe5051448f1ee47b85a5938cfdc9e3cb",
  "aliases_sha256": "5ddfe098780254d53dc48002be6e9fae86270ccdd4bfa0cde2a0942d6dc4543a",
  "job_id": "54048840",
  "graph_sequences_absent_from_native_catalogue": 0,
  "native_panel_aliases_retained": 495,
  "truth_loaded": false,
  "intervention": "Drop non-IPD-prefixed candidate placements before normalization; retain native panel aliases",
  "limitations": [
    "Existing original.fa/flanked reference configuration, not a full-genomic-IPD rebase.",
    "Tests incremental graph retrieval over native retrieval, not all possible graph algorithms.",
    "Candidate availability is held equal; retrieved candidates may differ by design.",
    "Same scorer, fallback and decision thresholds as original union replay."
  ],
  "retrieval_counts": {
    "fragments": 826228,
    "native_supported_fragments": 14432,
    "graph_supported_fragments": 14618,
    "graph_only_fragments": 4634
  },
  "status": "native_proposal_ablation_complete",
  "output_sha256": {
    "E1/calls.json": "2aa04c559b9c26844ce7d74f191192fc921db6aaf5f6b688fe103448c0d65195",
    "E1/decisions.json": "34311f2b229ee733cddd720c8aa9fd6141f13c48d99408f98de1e057735ce93c",
    "E1/sequence_calls.json": "365b5f9fb21ec5d04fe660097799b01788d9ce0090e90ce31a2324b699cc1d45",
    "E2/calls.json": "5923b0e505a8f72815dac8b3539ccfa16ec58d39e796d7ef3e5ff85d7d9b0da0",
    "E2/decisions.json": "716b900f84a662f7cb11559f43af344aeae7ac12de96a4b9a4d87d85e0d0f00c",
    "E2/sequence_calls.json": "4cc90027f25be002cca6a479df4c6365816b6b924a5a98f9b0a6e3fbf61b7a2a",
    "E3/calls.json": "f6d15ef6e9f756c3ec6d3b4375d7894fd9c51626181be2ed2fd88aeab140b088",
    "E3/decisions.json": "c5a6327e0af8136c608010f646e795e0012b2b0e3a26874e85b937e078533887",
    "E3/sequence_calls.json": "4cc90027f25be002cca6a479df4c6365816b6b924a5a98f9b0a6e3fbf61b7a2a"
  }
}