{
  "source": "/benchmark/pangenome-reference-cv-20261014/inference-japanese/runs/NA18945/hprc",
  "source_complete_sha256": "1752525fc71ede9b35576a5598e399a3d0b9e3c6d72613ec88099f02c466d324",
  "source_evidence_sha256": "578bd3ff11028fabb63ed7557d785690d5e57be0b04e7c900e384a1d51f51036",
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    "build_graph.py": "170765c3d0c53b3fc5bc9973016a17195937b9798e191dbacb08db124b94261a",
    "context_fragment.py": "098c19433935309ed05a2e3534ed514660c7af34baa3ce51928c3e6bca5ea6d6",
    "context_inference.py": "cb6007033d7d7320a26d8dc57283438385550949666e64e844363b159b66f7a0",
    "context_read_store.py": "6226eb83e37af78fcea04e17529f7cca8cd8e8b9e470b8ea5b0f5ad8a396eeee",
    "context_runtime_identity.py": "6d132df334e8ff31aeeb724808ed58aa8b7b7c264c97156ef89e9bdf52f115fb",
    "cv_references.py": "db687df88f0bc4e227c9b73242918629b1127d8ac80271c59056d703830ab126",
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    "fragment_support.py": "bbfd8943563acccbb6b5ebda723d4c7cef44ef88a2dd508439cbae28cf52856f",
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    "joint_model.py": "c2279fd29e12f215e23fdd148fe7a6794b70fe8221d639c69c55e1ae6f87b5e4",
    "run_context_evidence.py": "3e99c6f7b95d4df77ae2598a59860caeb5adf059ce1be60f6a244053b0783d6a",
    "run_context_evidence_disk_v3.py": "779ad5b3833dbdfa074778515bb89dc789a857606204f378225ff888e4a94a9d",
    "run_context_inference.py": "3072b63da055bbd819ff57280e39431d2da611824059458336c0264062f3d6f5",
    "run_context_linear.py": "33ef894cf3a287ec3c52a32da50d50ea3c99f87446ce7c27144c5a6e573d2203",
    "score_native.py": "531340bcca991cd2fac6f563ae557a2882e9f75d5b3d4cd101161dc58a25eee2",
    "sequence_identity.py": "0152f515c50ce66f5dc58ad1442072b0093c247e4eca98949501d869a44cb721",
    "t1k_evidence.py": "b79c8cdf6708bf8f0401adb4a0aa9a73b8251da3543b5d6343382ac02a06b9b6",
    "test_context_inference.py": "2e2e6a2ae2ef5caa3bc2fff812656745f877b6b5100de6050f39babeb0c7ae89"
  },
  "script_sha256": "f1080946e5a29b4b384e0db73a18ca3c6398b41112779c240b85cc69a775285e",
  "native_table_sha256": "a7b21088cea5d4251e0074eabd9b9bc14d1d213e1bc86b399b66c48c4da868ab",
  "aliases_sha256": "7853b5661b6d8c68262b9d7388437163b21358550240b256f35967adf40c5e62",
  "job_id": "54048838",
  "graph_sequences_absent_from_native_catalogue": 0,
  "native_panel_aliases_retained": 466,
  "truth_loaded": false,
  "intervention": "Drop non-IPD-prefixed candidate placements before normalization; retain native panel aliases",
  "limitations": [
    "Existing original.fa/flanked reference configuration, not a full-genomic-IPD rebase.",
    "Tests incremental graph retrieval over native retrieval, not all possible graph algorithms.",
    "Candidate availability is held equal; retrieved candidates may differ by design.",
    "Same scorer, fallback and decision thresholds as original union replay."
  ],
  "retrieval_counts": {
    "fragments": 876184,
    "native_supported_fragments": 15866,
    "graph_supported_fragments": 16174,
    "graph_only_fragments": 5118
  },
  "status": "native_proposal_ablation_complete",
  "output_sha256": {
    "E1/calls.json": "7deed106b1e95c144d8c08051ef99f46232d8014efcf37ed5a715054df9f70c0",
    "E1/decisions.json": "9d09b7d3c0eeeaf0d3445c9a89ac22ad150261c4fbf9ea96c907d56ad81bece2",
    "E1/sequence_calls.json": "fdeb3ab4a6f5b340b31aeed2fe8d9080d97d220f6902d33b5ee882b34943aca9",
    "E2/calls.json": "5e0b54688a20e67be99cb95bdb5bccf924e03a329571508af765f6407dff3424",
    "E2/decisions.json": "3b1307d6f429f64390cc8a2f1e7a6d4322daa3d6b4efc31990b8444a06c91368",
    "E2/sequence_calls.json": "643303f41563142319a8fe53c1fa6ddea6fb305aa101d4339b9a7cee8d75dc97",
    "E3/calls.json": "2b5f32fcfb65ee35f7387fc55b04a8ce1a1fd9eb5cd10c1f7ed991ecad284464",
    "E3/decisions.json": "3bd87fec14e45498dd79d9a8a8b9853d9e94e26b776a09c5b07b38d018aff81e",
    "E3/sequence_calls.json": "3997175def1fc66db2b8a90f7f30102e58704f1f8739bd5e5d69fb0067d0b9b5"
  }
}