{
  "source": "/benchmark/pangenome-reference-cv-20261014/inference-expansion41/runs/HG03654/hprc",
  "source_complete_sha256": "ccb696791aef7fd6b2d7dfd28bfa2630ad1407bfe022b292eaf62980e8684f77",
  "source_evidence_sha256": "c0e4a80c447b8d713a2270b59520b481a5370fe52fe4273fbdcb5f4e9fdef55f",
  "code_sha256": {
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    "build_graph.py": "170765c3d0c53b3fc5bc9973016a17195937b9798e191dbacb08db124b94261a",
    "context_fragment.py": "098c19433935309ed05a2e3534ed514660c7af34baa3ce51928c3e6bca5ea6d6",
    "context_inference.py": "cb6007033d7d7320a26d8dc57283438385550949666e64e844363b159b66f7a0",
    "context_read_store.py": "6226eb83e37af78fcea04e17529f7cca8cd8e8b9e470b8ea5b0f5ad8a396eeee",
    "context_runtime_identity.py": "6d132df334e8ff31aeeb724808ed58aa8b7b7c264c97156ef89e9bdf52f115fb",
    "cv_references.py": "db687df88f0bc4e227c9b73242918629b1127d8ac80271c59056d703830ab126",
    "evidence_io.py": "14495b5ddbe02f4514f886424a4c75aa42ca5102fb78c1122ec903858a8b2289",
    "fragment_support.py": "bbfd8943563acccbb6b5ebda723d4c7cef44ef88a2dd508439cbae28cf52856f",
    "join_evidence.py": "e9e9c5ac6bcb0197436fd6403286595814f669261e5d4caf8069a11b467a4930",
    "joint_model.py": "c2279fd29e12f215e23fdd148fe7a6794b70fe8221d639c69c55e1ae6f87b5e4",
    "run_context_evidence.py": "3e99c6f7b95d4df77ae2598a59860caeb5adf059ce1be60f6a244053b0783d6a",
    "run_context_evidence_disk_v3.py": "779ad5b3833dbdfa074778515bb89dc789a857606204f378225ff888e4a94a9d",
    "run_context_inference.py": "3072b63da055bbd819ff57280e39431d2da611824059458336c0264062f3d6f5",
    "run_context_linear.py": "33ef894cf3a287ec3c52a32da50d50ea3c99f87446ce7c27144c5a6e573d2203",
    "score_native.py": "531340bcca991cd2fac6f563ae557a2882e9f75d5b3d4cd101161dc58a25eee2",
    "sequence_identity.py": "0152f515c50ce66f5dc58ad1442072b0093c247e4eca98949501d869a44cb721",
    "t1k_evidence.py": "b79c8cdf6708bf8f0401adb4a0aa9a73b8251da3543b5d6343382ac02a06b9b6",
    "test_context_inference.py": "2e2e6a2ae2ef5caa3bc2fff812656745f877b6b5100de6050f39babeb0c7ae89"
  },
  "script_sha256": "f1080946e5a29b4b384e0db73a18ca3c6398b41112779c240b85cc69a775285e",
  "native_table_sha256": "8f1ff3a951f9c31e2e575b85390624a15283bb9201f4aa25fafab3f5d106124f",
  "aliases_sha256": "c722054e4c2fe96c51f4776b0089cfc399e4e592b77e793c240b8d7e070e0447",
  "job_id": "54050782",
  "graph_sequences_absent_from_native_catalogue": 0,
  "native_panel_aliases_retained": 468,
  "truth_loaded": false,
  "intervention": "Drop non-IPD-prefixed candidate placements before normalization; retain native panel aliases",
  "limitations": [
    "Existing original.fa/flanked reference configuration, not a full-genomic-IPD rebase.",
    "Tests incremental graph retrieval over native retrieval, not all possible graph algorithms.",
    "Candidate availability is held equal; retrieved candidates may differ by design.",
    "Same scorer, fallback and decision thresholds as original union replay."
  ],
  "retrieval_counts": {
    "fragments": 679985,
    "native_supported_fragments": 15618,
    "graph_supported_fragments": 14975,
    "graph_only_fragments": 3968
  },
  "status": "native_proposal_ablation_complete",
  "output_sha256": {
    "E1/calls.json": "1f165fb8ca62b3040bd46621589261fe7d1b0609cbf2b5984ce5450872997312",
    "E1/decisions.json": "8c8d5625f968459e46267ef95dbb5d96f6a9b23e20009c055233e56630acd23a",
    "E1/sequence_calls.json": "cab9578ce9cc0357642bc3710b3b5d3f525576643ff55cfe34c8087a55367825",
    "E2/calls.json": "17ea098e1b8e8732eec45796b7093be15fc247ac46069c4c06fc7544bf736e45",
    "E2/decisions.json": "4d5eb97f4c13feaac27a0212d6538bcdb411f21dd857e7bcb5e9ccebdbbedf42",
    "E2/sequence_calls.json": "92c7a95758614275a861f0ebd19f47aef0d0fca64fbaba1657b1797caa534347",
    "E3/calls.json": "864ed16f18f260826ca6afcc9ad9e662923eed65cc3202c9358aa37937a038a6",
    "E3/decisions.json": "c4094921c0ef7cc6c60a28ecb81ca9160960641586ec187adaaad9bdc64826d0",
    "E3/sequence_calls.json": "f05c2262cc908331d9c2629ad05c04015dd1412b7f876a618dc0fe48e0be4650"
  }
}