{
  "source": "/benchmark/pangenome-reference-cv-20261014/inference-expansion41/runs/HG02135/hprc",
  "source_complete_sha256": "436e8930770acec3322d97b413c175f87b35215677dbca6a995724a8972ad3fa",
  "source_evidence_sha256": "2ac3129c91ab220ed44e302f72f436a6f0eda35c7a3adef210d17644706f58c0",
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    "build_graph.py": "170765c3d0c53b3fc5bc9973016a17195937b9798e191dbacb08db124b94261a",
    "context_fragment.py": "098c19433935309ed05a2e3534ed514660c7af34baa3ce51928c3e6bca5ea6d6",
    "context_inference.py": "cb6007033d7d7320a26d8dc57283438385550949666e64e844363b159b66f7a0",
    "context_read_store.py": "6226eb83e37af78fcea04e17529f7cca8cd8e8b9e470b8ea5b0f5ad8a396eeee",
    "context_runtime_identity.py": "6d132df334e8ff31aeeb724808ed58aa8b7b7c264c97156ef89e9bdf52f115fb",
    "cv_references.py": "db687df88f0bc4e227c9b73242918629b1127d8ac80271c59056d703830ab126",
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    "fragment_support.py": "bbfd8943563acccbb6b5ebda723d4c7cef44ef88a2dd508439cbae28cf52856f",
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    "joint_model.py": "c2279fd29e12f215e23fdd148fe7a6794b70fe8221d639c69c55e1ae6f87b5e4",
    "run_context_evidence.py": "3e99c6f7b95d4df77ae2598a59860caeb5adf059ce1be60f6a244053b0783d6a",
    "run_context_evidence_disk_v3.py": "779ad5b3833dbdfa074778515bb89dc789a857606204f378225ff888e4a94a9d",
    "run_context_inference.py": "3072b63da055bbd819ff57280e39431d2da611824059458336c0264062f3d6f5",
    "run_context_linear.py": "33ef894cf3a287ec3c52a32da50d50ea3c99f87446ce7c27144c5a6e573d2203",
    "score_native.py": "531340bcca991cd2fac6f563ae557a2882e9f75d5b3d4cd101161dc58a25eee2",
    "sequence_identity.py": "0152f515c50ce66f5dc58ad1442072b0093c247e4eca98949501d869a44cb721",
    "t1k_evidence.py": "b79c8cdf6708bf8f0401adb4a0aa9a73b8251da3543b5d6343382ac02a06b9b6",
    "test_context_inference.py": "2e2e6a2ae2ef5caa3bc2fff812656745f877b6b5100de6050f39babeb0c7ae89"
  },
  "script_sha256": "f1080946e5a29b4b384e0db73a18ca3c6398b41112779c240b85cc69a775285e",
  "native_table_sha256": "56819c65a3c35ba54e6882c62a0b466c91f8841b7a7ac08ab5362a9a3542bcb3",
  "aliases_sha256": "b61fc4be07f24f804754cccdfe834f2e60d2c1aefd437622cb0d4552bfff1c9b",
  "job_id": "54050036",
  "graph_sequences_absent_from_native_catalogue": 0,
  "native_panel_aliases_retained": 504,
  "truth_loaded": false,
  "intervention": "Drop non-IPD-prefixed candidate placements before normalization; retain native panel aliases",
  "limitations": [
    "Existing original.fa/flanked reference configuration, not a full-genomic-IPD rebase.",
    "Tests incremental graph retrieval over native retrieval, not all possible graph algorithms.",
    "Candidate availability is held equal; retrieved candidates may differ by design.",
    "Same scorer, fallback and decision thresholds as original union replay."
  ],
  "retrieval_counts": {
    "fragments": 719269,
    "native_supported_fragments": 16078,
    "graph_supported_fragments": 15367,
    "graph_only_fragments": 4105
  },
  "status": "native_proposal_ablation_complete",
  "output_sha256": {
    "E1/calls.json": "e7d627f864902e70daa15458ea2091c4a542644eb45c045e25d22b2b9d6e32b6",
    "E1/decisions.json": "e79dc2bfd7b8760c0dc7a0980e93d8b90a63314cedd59db77b43cb9e2934beb9",
    "E1/sequence_calls.json": "b77f89e23c684af313650d6afb1629ce72752b946d762be56daddb6650d34807",
    "E2/calls.json": "575184150e77c4f619be86eeadcd7ab3d1440cf1e35e56f65ee4caa401bcbbea",
    "E2/decisions.json": "2ee7afd846f10130c86d2de8241a8f3cc32d80065243eb765fd31540fa711518",
    "E2/sequence_calls.json": "699a89525b800af1e8cf9ff30ccf53c14a6c4d5bcd7745da5b6078c75ac39c7c",
    "E3/calls.json": "754fcd3a427b37e71b65c313142ca857c4545a0b96006a355fa2a11b99d0cd13",
    "E3/decisions.json": "6f997b9c7db8b5c90e10e1ed0ea708b4f06930e8c451c3975df78be446894289",
    "E3/sequence_calls.json": "b60ac7e8684de13540943a50802d168b9b7d6159d1c73cd3265c5d3bf1669531"
  }
}