Method	Software version	Database version / release status	Configuration
T1K	1.0.6-r216	database version: IPD-IMGT/HLA 3.65.0	shortened/default original reference; full genomic reference; fold-specific population augmentation where stated
OptiType	1.5.0	database version: bundled historical database; exact IPD release unknown	
SpecHLA	1.0.12	annotation database version: IPD-IMGT/HLA 3.65; mapping and binning database version: 3.38; renewed G annotation version: IPD-IMGT/HLA 3.65.0	
HLA*LA	1.0.4	database version: historical PRG; exact IPD release unknown; native G annotation version: IPD-IMGT/HLA 3.32.0	
DogoHLA graph pipeline	development snapshot; no semantic release version recorded; vg v1.76.1-89-gf2ed0bbd4 Chomper (Cactus v3.3.0 distribution)	native database version: IPD-IMGT/HLA 3.65.0; graph database version: fold-specific HPRC / HPRC plus Arab/Saudi observed haplotypes; individual source hashes in release plans	
HLA-HD	unavailable; not run	database version: unavailable; not run