{
  "status": "shared_read_linkage_ablation_inference_complete",
  "arm": {
    "donor": "HG03942",
    "panel": "hprc_asian",
    "fold": 3,
    "training_panel": "fold3.hprc_asian.json",
    "evidence": "/benchmark/pangenome-reference-cv-20261014/inference-dsf100/runs/HG03942/hprc_asian/evidence",
    "source_stage": "inference-dsf100",
    "source_plan_sha256": "b5d5909e8eed90925f1ae807d804d1a10ca076b620c13a5e38e81867ae039502"
  },
  "job_id": "54050905",
  "plan_sha256": "1045d38b49674e39ab60c464b1a7e473401bad308860ee63e4401b6071644bff",
  "likelihood_receipt_sha256": "e715aacc31eba85ab75a899438f26b89b04c79041780722363ad3b6942e723fb",
  "prior_selection_sha256": "f545c2a4c863791110685a534012c0fa303033a5e57960f4ba33d1ca7f4297c0",
  "output_sha256": {
    "independent.json": "60d4681cad1689dfb591dab4e39aa089aa3aea34179d4cb80b22d6d701448fe9",
    "linked.json": "3c3727e86ff31154e6e2183ab9bb9734f96937d32fdc74f5e9776c9d33292f5e",
    "shuffled.json": "33c17d80d4c5246c09926b60fbb168eb161cad0e64f35b9cb18e6e48ab89a03d"
  },
  "summary": [
    {
      "mode": "independent",
      "rho": 1,
      "imputed_loci": 0
    },
    {
      "mode": "linked",
      "rho": 0.25,
      "imputed_loci": 0
    },
    {
      "mode": "shuffled",
      "rho": 0.25,
      "imputed_loci": 0
    }
  ],
  "truth_loaded": false,
  "accuracy_scored": false,
  "limitations": [
    "Development pilot, conditional on uniquely assigned internal read fragments and fixed candidate retrieval.",
    "Independent, linked and shuffled arms share likelihoods and marginal candidate priors.",
    "Prior parameters selected with training family holdouts; read-error and posterior calibration unestablished.",
    "Unphased marginal typing only; no chromosome phase path or within-gene block reconstruction.",
    "Sequences absent from every candidate are not recoverable."
  ]
}