{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          3
        ]
      ],
      "score_gap": 113.10917399416212,
      "distinct_support": [
        311.8125607110144,
        266.9305361735271
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 583.737130680948,
        "score_gap": 47.0598832688446,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGff4542cf7216b811166209ae47dc46f5a163bb2cf218a6876f61b85a6b28ab3f#0#HLA_A"
        ],
        [
          "PG44cbc4fa7613c62fd4b1278ef57d9cefa2364d172bffe44d46b600f2a8da1485#0#HLA_A",
          "PG6006cc5ad076b0add2a651dff0d8d550b4898f3b7df5a876aa0228fb6a9349ad#0#HLA_A",
          "PGe14508bcfcf06f67ab63f7f2e4541da5f9d881b5f19a5350cd32bfeb95d8799f#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          33,
          34
        ]
      ],
      "score_gap": 322.918073683104,
      "distinct_support": [
        329.65874074379565,
        314.5349396130907
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 656.9255811359487,
        "score_gap": 129.41611562679185,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG1ea664cd9cff3ae902ab45565adc6e6743f7e3a0ba4570b7d7021a7419b35edb#0#HLA_B"
        ],
        [
          "PG3f9a4ed9f9a16483ebbc74b67767891a9c7c1c93c0d050ece5874d3cceea4b75#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          67,
          69
        ]
      ],
      "score_gap": 86.0632089808787,
      "distinct_support": [
        329.84919517114497,
        318.09545621048767
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 648.9531007575897,
        "score_gap": 66.66878966399884,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG09c558a76493ea9697f343b0521258f809d2e4f5e65b8c1cd9b537eaf5e5dbcf#0#HLA_C",
          "PGb5e1d8ec21508d1832879e3ba6706ae956424bc617574947a77a7dd17270f3da#0#HLA_C"
        ],
        [
          "PG6961a9de425626435d5a0d774c29d1d2ca66de66b3b1d711aa934e0724e138cc#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          99,
          100
        ]
      ],
      "score_gap": 47.30393072149309,
      "distinct_support": [
        81.4805156784341,
        69.31945459517277
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 606.9710117625176,
        "score_gap": 28.515822036787455,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:02"
        ],
        [
          "IPD:HLA-DMA*01:01:01:03"
        ]
      ]
    },
    "DMB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          132,
          133
        ]
      ],
      "score_gap": 16.634754362748936,
      "distinct_support": [
        53.0,
        48.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 714.9736084469913,
        "score_gap": 12.11981731191517,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMB*01:03:01:17"
        ],
        [
          "IPD:HLA-DMB*01:03:01:03"
        ]
      ]
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          163,
          168
        ]
      ],
      "score_gap": 110.23655878097634,
      "distinct_support": [
        162.95996489977065,
        147.98946966620065
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 450.9609642835272,
        "score_gap": 39.21571628629846,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:01:12"
        ],
        [
          "IPD:HLA-DOA*01:01:02:45"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          195,
          198
        ]
      ],
      "score_gap": 26.87733589342679,
      "distinct_support": [
        144.87224523647006,
        129.00491670517346
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 514.9645567676027,
        "score_gap": 26.643472765983176,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:09"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          227,
          228
        ]
      ],
      "score_gap": 10.209792118839687,
      "distinct_support": [
        461.93617572957686,
        451.26654535883523
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1250.959702142085,
        "score_gap": 40.9392116702187,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG18571131a7301cf40b856c907d2a9ce85d13578dcb08ed2592f1fec71f06bfbc#0#HLA_DPA1",
          "PG22dee041d2a1ae0cdc1936bc6522017e2909f1ccc1da4d739555c5fdb313446c#0#HLA_DPA1",
          "PG892c293c0d45abee5094160addb0b11092581d47593f5606a221ab3650f466f3#0#HLA_DPA1",
          "PG8c618a56c65896fe8383b8bbbcf98e4cbe441866e8baad5d8a0d09c4b33bf12f#0#HLA_DPA1",
          "PGe3b392560417a4ee51383a62c8b7f43764e4b74412423d68f43a5afda209e480#0#HLA_DPA1"
        ],
        [
          "PG5bbd8af323cca5bcd99035c40a3d4fcda565ba7cc0237491ecfb9febea5e9bf3#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          259,
          260
        ]
      ],
      "score_gap": 9.70367694227025
    },
    "DPB1": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          264,
          296
        ]
      ],
      "score_gap": 21.487054859040654,
      "distinct_support": [
        263.2094298765562,
        68.93962523903804
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1405.7903922523421,
        "score_gap": -0.14230892317334565,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DPB2": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          297,
          298
        ]
      ],
      "score_gap": 31.684622027139994,
      "distinct_support": [
        397.0306590480454,
        36.19791124778043
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2119.9721766054668,
        "score_gap": -127.98572975183092,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          304,
          308
        ]
      ],
      "score_gap": 137.9196504809952,
      "distinct_support": [
        455.19965376308926,
        420.65534568982025
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 870.9540578431479,
        "score_gap": 66.6700348106541,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG5b61ea9339aab2ad28f10f39a677c16ad7bb98d6c060df8bce5f091adb068ffd#0#HLA_DQA1"
        ],
        [
          "PG9dc6588bb49c5195522235b008c0c96a0c89c2b96170acadd7650399804b031b#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          336,
          340
        ]
      ],
      "score_gap": 8.185998065921012
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          368,
          370
        ]
      ],
      "score_gap": 149.3329317234311,
      "distinct_support": [
        499.6184875007406,
        483.54505136655723
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 994.0087357703877,
        "score_gap": 79.47724923128033,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG612c0441b27bb23427040a2788f10d95e55d00c808594d04466745f9c64a74a4#0#HLA_DQB1"
        ],
        [
          "PGb7ccf6eee0da9ba079fbad27c261c61e2672b03288b21adfa5c81b657fe6b504#0#HLA_DQB1",
          "PGc72a3ca699df47d0c749c1960687ed05c444406c4ec8e96aa7b14edec5cd2c39#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          401,
          408
        ]
      ],
      "score_gap": 108.41256146495289,
      "distinct_support": [
        89.02514153859596,
        47.21572850942569
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 910.9734484881286,
        "score_gap": 39.140845983775506,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:03"
        ]
      ]
    },
    "DRA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          432,
          432
        ]
      ],
      "score_gap": 10.396621496474836,
      "distinct_support": [
        590.2376122883106,
        590.2376122883106
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 590.9768708467088,
        "score_gap": 10.247552240028693,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DRA*01:01:01:12"
        ],
        [
          "IPD:HLA-DRA*01:01:01:12"
        ]
      ]
    },
    "DRB1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          464,
          479
        ]
      ],
      "score_gap": 0.0009764113929122686
    },
    "DRB3": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          497,
          501
        ]
      ],
      "score_gap": 15.255860108329216,
      "distinct_support": [
        26.89286687092303,
        16.240598476763
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 750.9755015622596,
        "score_gap": 1.3406770459617015,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          528,
          528
        ]
      ],
      "score_gap": 4.194942369605997
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          560,
          560
        ]
      ],
      "score_gap": 0.6885383773624199
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          563,
          563
        ]
      ],
      "score_gap": 4.158594974433072
    },
    "F": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          595,
          596
        ]
      ],
      "score_gap": 4.15852880528837
    },
    "G": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          628,
          631
        ]
      ],
      "score_gap": 26.72034742627875,
      "distinct_support": [
        189.0,
        134.83909030310372
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 340.95493501404445,
        "score_gap": 11.764326116528963,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-G*01:03:01:02"
        ],
        [
          "IPD:HLA-G*01:04:01:01"
        ]
      ]
    },
    "H": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          660,
          660
        ]
      ],
      "score_gap": 5.410523185506463
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          690,
          691
        ]
      ],
      "score_gap": 31.60124297674338,
      "distinct_support": [
        197.26633074184485,
        176.68850300084114
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 432.9568853636365,
        "score_gap": 15.863626468489457,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:09"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          722,
          722
        ]
      ],
      "score_gap": 101.8626387110562,
      "distinct_support": [
        192.93110631522427,
        192.93110631522427
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 192.97689425757508,
        "score_gap": 100.4179180045381,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:04"
        ],
        [
          "IPD:HLA-K*01:04"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          729,
          730
        ]
      ],
      "score_gap": 120.95310973848973,
      "distinct_support": [
        216.03585554623407,
        204.00069722457044
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 480.95673404666,
        "score_gap": 51.66392087503169,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:03"
        ],
        [
          "IPD:HLA-L*01:01:01:01"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          736,
          738
        ]
      ],
      "score_gap": 6.919810104271164
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          767,
          777
        ]
      ],
      "score_gap": 0.6929982461442705
    },
    "N": {
      "reason": "insufficient_distinct_copy_support",
      "pairs": [
        [
          799,
          802
        ]
      ],
      "score_gap": 11.293216798338108,
      "distinct_support": [
        9.953694524853137,
        3.0
      ]
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          803,
          804
        ]
      ],
      "score_gap": 128.24154521871242,
      "distinct_support": [
        76.0,
        39.9009009009009
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 273.9671352890398,
        "score_gap": 102.6508466593781,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:02"
        ],
        [
          "IPD:HLA-P*02:01:01:01"
        ]
      ]
    },
    "R": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          808,
          808
        ]
      ],
      "score_gap": 14.553078329539858,
      "distinct_support": [
        161.0,
        161.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 160.976902822767,
        "score_gap": 14.34507559357414,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-R*01:01:01:01"
        ],
        [
          "IPD:HLA-R*01:01:01:01"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          810,
          812
        ]
      ],
      "score_gap": 87.35507166720345,
      "distinct_support": [
        44.0,
        23.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 66.95380564550881,
        "score_gap": 47.03123113508897,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:03"
        ],
        [
          "IPD:HLA-S*01:01:01:02"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          817,
          817
        ]
      ],
      "score_gap": 13.16701912220742,
      "distinct_support": [
        158.0,
        158.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 157.97690282276693,
        "score_gap": 12.978842559265905,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*03:01:01:02"
        ],
        [
          "IPD:HLA-T*03:01:01:02"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          819,
          820
        ]
      ],
      "score_gap": 2.7723542386083864
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          836,
          843
        ]
      ],
      "score_gap": 11.782704002063838,
      "distinct_support": [
        109.0,
        50.979550577473375
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 491.9693874211269,
        "score_gap": 11.614442605275272,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*02:01:03:01"
        ],
        [
          "IPD:TAP2*01:01:03:20"
        ]
      ]
    },
    "U": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          868,
          868
        ]
      ],
      "score_gap": null
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          869,
          870
        ]
      ],
      "score_gap": 97.65464764462376,
      "distinct_support": [
        96.13800849508237,
        93.18416038982741
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 199.95506592144437,
        "score_gap": 44.32067003738919,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:02"
        ],
        [
          "IPD:HLA-V*01:01:01:04"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          873,
          876
        ]
      ],
      "score_gap": 132.45220822453848,
      "distinct_support": [
        112.21870348497707,
        63.87075478753495
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 331.96396791600773,
        "score_gap": 126.31871468897772,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*01:01:01:07"
        ],
        [
          "IPD:HLA-W*01:01:01:04"
        ]
      ]
    },
    "Y": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          885,
          885
        ]
      ],
      "score_gap": 49.887705350789474,
      "distinct_support": [
        135.0,
        135.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 134.9768875613583,
        "score_gap": 47.13250691230208,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-Y*02:01"
        ],
        [
          "IPD:HLA-Y*02:01"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 2534,
      "evidence_groups": 1410,
      "retained_groups": 33,
      "retained_paths": 41,
      "cutoff": 206.3589269092762
    },
    "B": {
      "observed_paths": 5411,
      "evidence_groups": 2156,
      "retained_groups": 34,
      "retained_paths": 38,
      "cutoff": 214.94826946248787
    },
    "C": {
      "observed_paths": 5826,
      "evidence_groups": 2023,
      "retained_groups": 32,
      "retained_paths": 48,
      "cutoff": 216.85772397403525
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 475.39976719621546
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 608.0778607771288
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 165,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 250.8848371250063
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 284.0430176604596
    },
    "DPA1": {
      "observed_paths": 566,
      "evidence_groups": 345,
      "retained_groups": 32,
      "retained_paths": 42,
      "cutoff": 687.4658911170887
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 6,
      "cutoff": 230.7494684198253
    },
    "DPB1": {
      "observed_paths": 1845,
      "evidence_groups": 816,
      "retained_groups": 33,
      "retained_paths": 34,
      "cutoff": 1176.190126322972
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 54.25058226522927
    },
    "DQA1": {
      "observed_paths": 567,
      "evidence_groups": 369,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 298.29000452474736
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 129.76086219638347
    },
    "DQB1": {
      "observed_paths": 542,
      "evidence_groups": 459,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 396.3949245861045
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 159.0
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 116,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 518.275024916695
    },
    "DRB1": {
      "observed_paths": 1011,
      "evidence_groups": 380,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 789.7060614981114
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 222,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 683.7158710822536
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 122,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 657.386701289231
    },
    "DRB5": {
      "observed_paths": 60,
      "evidence_groups": 5,
      "retained_groups": 3,
      "retained_paths": 25,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 311,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 424.9301342476686
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 122,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 315.850435800531
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 152,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 118.92076938610079
    },
    "H": {
      "observed_paths": 91,
      "evidence_groups": 39,
      "retained_groups": 30,
      "retained_paths": 41,
      "cutoff": 2.0
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 34,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 71.45523971206234
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 4.0
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 86.96414445376593
    },
    "MICA": {
      "observed_paths": 405,
      "evidence_groups": 240,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 96.8962113674188
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 91,
      "retained_groups": 32,
      "retained_paths": 39,
      "cutoff": 67.91582554788161
    },
    "N": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 1.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 32.0
    },
    "R": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 140.0
    },
    "S": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 6.000000000219701
    },
    "T": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 139.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 224.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 83,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 306.9286158970931
    },
    "U": {
      "observed_paths": 1,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 28.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 81.71480282446956
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 12,
      "retained_paths": 12,
      "cutoff": 1.9831026660186688
    },
    "Y": {
      "observed_paths": 3,
      "evidence_groups": 3,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 5.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 4,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            3
          ]
        ],
        "gene_fraction": 0.025576137604925074,
        "score_gap": 113.10917399416212
      },
      "B": {
        "pairs": [
          [
            33,
            34
          ]
        ],
        "gene_fraction": 0.02874485862275037,
        "score_gap": 322.918073683104
      },
      "C": {
        "pairs": [
          [
            67,
            69
          ]
        ],
        "gene_fraction": 0.02844297949000266,
        "score_gap": 86.0632089808787
      },
      "DMA": {
        "pairs": [
          [
            99,
            100
          ]
        ],
        "gene_fraction": 0.026279012612571727,
        "score_gap": 47.30393072149309
      },
      "DMB": {
        "pairs": [
          [
            132,
            133
          ]
        ],
        "gene_fraction": 0.03095502109677275,
        "score_gap": 16.634754362748936
      },
      "DOA": {
        "pairs": [
          [
            163,
            168
          ]
        ],
        "gene_fraction": 0.019524505516848534,
        "score_gap": 110.23655878097634
      },
      "DOB": {
        "pairs": [
          [
            195,
            198
          ]
        ],
        "gene_fraction": 0.022295562423552608,
        "score_gap": 26.87733589342679
      },
      "DPA1": {
        "pairs": [
          [
            227,
            228
          ]
        ],
        "gene_fraction": 0.05433389294241377,
        "score_gap": 10.209792118839687
      },
      "DPA2": {
        "pairs": [
          [
            259,
            260
          ]
        ],
        "gene_fraction": 0.036496260517002076,
        "score_gap": 9.70367694227025
      },
      "DPB1": {
        "pairs": [
          [
            264,
            296
          ]
        ],
        "gene_fraction": 0.061123927902685116,
        "score_gap": 21.487054859040654
      },
      "DPB2": {
        "pairs": [
          [
            297,
            298
          ]
        ],
        "gene_fraction": 0.0917849032155154,
        "score_gap": 31.684622027139994
      },
      "DQA1": {
        "pairs": [
          [
            304,
            308
          ]
        ],
        "gene_fraction": 0.037968005052631024,
        "score_gap": 137.9196504809952
      },
      "DQA2": {
        "pairs": [
          [
            336,
            340
          ]
        ],
        "gene_fraction": 0.02879009674569687,
        "score_gap": 8.185998065921012
      },
      "DQB1": {
        "pairs": [
          [
            368,
            370
          ]
        ],
        "gene_fraction": 0.043295700029215275,
        "score_gap": 149.3329317234311
      },
      "DQB2": {
        "pairs": [
          [
            401,
            408
          ]
        ],
        "gene_fraction": 0.039440899613093335,
        "score_gap": 108.41256146495289
      },
      "DRA": {
        "pairs": [
          [
            432,
            432
          ]
        ],
        "gene_fraction": 0.025586540941644025,
        "score_gap": 10.396621496474836
      },
      "DRB1": {
        "pairs": [
          [
            464,
            479
          ]
        ],
        "gene_fraction": 0.10983153979253243,
        "score_gap": 0.0009764113929122686
      },
      "DRB3": {
        "pairs": [
          [
            497,
            501
          ]
        ],
        "gene_fraction": 0.03251373507983477,
        "score_gap": 15.255860108329216
      },
      "DRB4": {
        "pairs": [
          [
            528,
            528
          ]
        ],
        "gene_fraction": 0.03407242518781064,
        "score_gap": 4.194942369605997
      },
      "DRB5": {
        "pairs": [
          [
            560,
            560
          ]
        ],
        "gene_fraction": 0.0002154766685315883,
        "score_gap": 0.6885383773624199
      },
      "E": {
        "pairs": [
          [
            563,
            563
          ]
        ],
        "gene_fraction": 0.020823978377611845,
        "score_gap": 4.158594974433072
      },
      "F": {
        "pairs": [
          [
            595,
            596
          ]
        ],
        "gene_fraction": 0.017187138637058376,
        "score_gap": 4.15852880528837
      },
      "G": {
        "pairs": [
          [
            628,
            631
          ]
        ],
        "gene_fraction": 0.014761757749811422,
        "score_gap": 26.72034742627875
      },
      "H": {
        "pairs": [
          [
            660,
            660
          ]
        ],
        "gene_fraction": 0.009350791094233068,
        "score_gap": 5.410523185506463
      },
      "J": {
        "pairs": [
          [
            690,
            691
          ]
        ],
        "gene_fraction": 0.018745012908512153,
        "score_gap": 31.60124297674338
      },
      "K": {
        "pairs": [
          [
            722,
            722
          ]
        ],
        "gene_fraction": 0.008354999068306179,
        "score_gap": 101.8626387110562
      },
      "L": {
        "pairs": [
          [
            729,
            730
          ]
        ],
        "gene_fraction": 0.0208231823837498,
        "score_gap": 120.95310973848973
      },
      "MICA": {
        "pairs": [
          [
            736,
            738
          ]
        ],
        "gene_fraction": 0.008093029942642731,
        "score_gap": 6.919810104271164
      },
      "MICB": {
        "pairs": [
          [
            767,
            777
          ]
        ],
        "gene_fraction": 0.006712871385599317,
        "score_gap": 0.6929982461442705
      },
      "N": {
        "pairs": [
          [
            799,
            802
          ]
        ],
        "gene_fraction": 0.0008642522594523737,
        "score_gap": 11.293216798338108
      },
      "P": {
        "pairs": [
          [
            803,
            804
          ]
        ],
        "gene_fraction": 0.011861498594907958,
        "score_gap": 128.24154521871242
      },
      "R": {
        "pairs": [
          [
            808,
            808
          ]
        ],
        "gene_fraction": 0.006969548754763922,
        "score_gap": 14.553078329539858
      },
      "S": {
        "pairs": [
          [
            810,
            812
          ]
        ],
        "gene_fraction": 0.0028987873684112116,
        "score_gap": 87.35507166720345
      },
      "T": {
        "pairs": [
          [
            817,
            817
          ]
        ],
        "gene_fraction": 0.006839662753103722,
        "score_gap": 13.16701912220742
      },
      "TAP1": {
        "pairs": [
          [
            819,
            820
          ]
        ],
        "gene_fraction": 0.01705727784869611,
        "score_gap": 2.7723542386083864
      },
      "TAP2": {
        "pairs": [
          [
            836,
            843
          ]
        ],
        "gene_fraction": 0.02129997888912412,
        "score_gap": 11.782704002063838
      },
      "U": {
        "pairs": [
          [
            868,
            868
          ]
        ],
        "gene_fraction": 0.0012112693478288175,
        "score_gap": null
      },
      "V": {
        "pairs": [
          [
            869,
            870
          ]
        ],
        "gene_fraction": 0.008657121339467347,
        "score_gap": 97.65464764462376
      },
      "W": {
        "pairs": [
          [
            873,
            876
          ]
        ],
        "gene_fraction": 0.014372490827728403,
        "score_gap": 132.45220822453848
      },
      "Y": {
        "pairs": [
          [
            885,
            885
          ]
        ],
        "gene_fraction": 0.005843869412961079,
        "score_gap": 49.887705350789474
      }
    },
    "unassigned_fragments": 1333,
    "objective_trace": [
      -107458.5540852978,
      -107458.55173100853,
      -107458.55173098462,
      -107458.55173098462
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}
