{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          4
        ]
      ],
      "score_gap": 206.36981435044436,
      "distinct_support": [
        421.8618325985366,
        381.00398408414856
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 806.9239218916911,
        "score_gap": 86.27613471792495,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG81b8d891cb0e4efd4a3be3acee86a8650f3d386ce68676616ba06e984fd9bd0f#0#HLA_A"
        ],
        [
          "PG44cbc4fa7613c62fd4b1278ef57d9cefa2364d172bffe44d46b600f2a8da1485#0#HLA_A",
          "PGe14508bcfcf06f67ab63f7f2e4541da5f9d881b5f19a5350cd32bfeb95d8799f#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          33,
          34
        ]
      ],
      "score_gap": 463.45865835779114,
      "distinct_support": [
        443.77904617397655,
        398.0824913418636
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 872.5438564752548,
        "score_gap": 204.96807123544716,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG1ea664cd9cff3ae902ab45565adc6e6743f7e3a0ba4570b7d7021a7419b35edb#0#HLA_B"
        ],
        [
          "PG6a0b548d1c7edd52d9766723d899b970edad80de8ea6a643409651dffcb7ca10#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          65,
          66
        ]
      ],
      "score_gap": 200.91042071819538,
      "distinct_support": [
        492.84432434726614,
        472.83902064869164
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 973.6683003257195,
        "score_gap": 101.96409035674947,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG7b6ba8b70ce56d8a2f9c49f594a23075991f10aa1869c37832a0891afabd8050#0#HLA_C",
          "PGa95377b43787f87e477e1335831f85d19919e0cbe7d482048e05c703f0ebeee3#0#HLA_C",
          "PGe1132018efa8dfcc879c18fab2098a370c909ff32548e2bb374556f5601a0a3c#0#HLA_C",
          "PGee34c1669a0713feece6b00e188eb48272777d3227ab04545cc7fa50d8afa0a0#0#HLA_C"
        ],
        [
          "PG09c558a76493ea9697f343b0521258f809d2e4f5e65b8c1cd9b537eaf5e5dbcf#0#HLA_C",
          "PGb5e1d8ec21508d1832879e3ba6706ae956424bc617574947a77a7dd17270f3da#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          98,
          98
        ]
      ],
      "score_gap": 7.624185297638178
    },
    "DMB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          130,
          135
        ]
      ],
      "score_gap": 6.23806263730512
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          162,
          164
        ]
      ],
      "score_gap": 100.96526949384133,
      "distinct_support": [
        246.90636055365138,
        227.9483011138783
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 664.9411353158478,
        "score_gap": 35.29411664252274,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:01:01"
        ],
        [
          "IPD:HLA-DOA*01:01:02:45"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          195,
          209
        ]
      ],
      "score_gap": 56.2108686985448,
      "distinct_support": [
        243.77907517548408,
        185.99929587265837
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 803.9472188823945,
        "score_gap": 23.529831030796004,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:09"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          227,
          230
        ]
      ],
      "score_gap": 205.79397956520552,
      "distinct_support": [
        999.2285608792497,
        955.324789845477
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2013.9317225498783,
        "score_gap": 78.43680119276178,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG6c35c64a1adc70a5d548935dd517dbc5b330c09046bba92692fd1b5fe359d498#0#HLA_DPA1",
          "PGf2f350564aca8ef6f10a5fc465cad811fc9241db1b8e1cad62e48326f21999ce#0#HLA_DPA1"
        ],
        [
          "PG22dee041d2a1ae0cdc1936bc6522017e2909f1ccc1da4d739555c5fdb313446c#0#HLA_DPA1",
          "PG892c293c0d45abee5094160addb0b11092581d47593f5606a221ab3650f466f3#0#HLA_DPA1",
          "PG8c618a56c65896fe8383b8bbbcf98e4cbe441866e8baad5d8a0d09c4b33bf12f#0#HLA_DPA1",
          "PGa96c861416ca458b87d085f65dbf61eb70d19ea3c4efd0945308fdeb2d76936a#0#HLA_DPA1",
          "PGe36d9854b1f65c4e961ff2e3d6a3c4baf1d3a24780e3fd3dfbf7611b099cea6e#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          259,
          262
        ]
      ],
      "score_gap": 449.7827735168976,
      "distinct_support": [
        572.2549075043381,
        391.0592788876951
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1285.9399779737041,
        "score_gap": 177.66850241885447,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:02"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          265,
          266
        ]
      ],
      "score_gap": 301.43948980083223,
      "distinct_support": [
        1024.1316121003654,
        1014.5571455296019
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2341.841997511762,
        "score_gap": 112.36755486328161,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGb99789d7f6b1f119a967fd83916605ea02a2a476fa975d970c898d6ee619e810#0#HLA_DPB1"
        ],
        [
          "PGf133b754006ad7fdf124f43260f80d891032a212a4529e3545ba129b9aa835f3#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          298,
          299
        ]
      ],
      "score_gap": 2561.611162675079,
      "distinct_support": [
        1452.9838060465463,
        1353.4181956279149
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 3243.935962562332,
        "score_gap": 999.8541604870902,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*01:01:02"
        ],
        [
          "IPD:HLA-DPB2*03:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          305,
          308
        ]
      ],
      "score_gap": 266.1087108568172,
      "distinct_support": [
        681.6553905082421,
        626.5432896500022
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1300.9321619695147,
        "score_gap": 105.8877272485588,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG9dc6588bb49c5195522235b008c0c96a0c89c2b96170acadd7650399804b031b#0#HLA_DQA1"
        ],
        [
          "PG8f3e53450cef90c8c5d99aa738318669be11b3823c11daa97f08d9567815979b#0#HLA_DQA1",
          "PGc24c948801fbb79feb5579fd7c6cc828e076f2f181b75fc67547cd2de847d47d#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          337,
          341
        ]
      ],
      "score_gap": 13.892797807056922,
      "distinct_support": [
        183.62518642470886,
        110.61910271297546
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1020.955347385583,
        "score_gap": 8.02196714109715,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          369,
          373
        ]
      ],
      "score_gap": 10.001288300845772,
      "distinct_support": [
        781.4428522748678,
        721.8486345402175
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1508.8085720469792,
        "score_gap": 83.52866298816275,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGb7ccf6eee0da9ba079fbad27c261c61e2672b03288b21adfa5c81b657fe6b504#0#HLA_DQB1",
          "PGc72a3ca699df47d0c749c1960687ed05c444406c4ec8e96aa7b14edec5cd2c39#0#HLA_DQB1"
        ],
        [
          "PGa47c31a253498296f573de0893b5e94762d4fe5ef2d796926985ff3bf96480c0#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          401,
          407
        ]
      ],
      "score_gap": 261.83661458990537,
      "distinct_support": [
        138.02170630609842,
        59.22632435485448
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1339.9606254870428,
        "score_gap": 65.02407751380059,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:03"
        ]
      ]
    },
    "DRA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          433,
          434
        ]
      ],
      "score_gap": 39.91901056279312,
      "distinct_support": [
        385.28091512791354,
        383.8001225664426
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 880.9355226289972,
        "score_gap": 17.73618176159175,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DRA*01:02:02:14"
        ],
        [
          "IPD:HLA-DRA*01:01:01:12"
        ]
      ]
    },
    "DRB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          465,
          474
        ]
      ],
      "score_gap": 86.80195653182454,
      "distinct_support": [
        2532.9396519287693,
        1267.9870327333197
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 3794.7837418111003,
        "score_gap": 31.375189036885786,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGa2ff6dda1dcdfa4d4bfdc6c8d7c79f616f78c1c79ae5c735a182b8e301bfb42c#0#HLA_DRB1"
        ],
        [
          "PG7ce8218a0cc31cee1db70773053977a14310c9446838cb497d16e0852cc179ea#0#HLA_DRB1"
        ]
      ]
    },
    "DRB3": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          497,
          497
        ]
      ],
      "score_gap": 21.486701814777916,
      "distinct_support": [
        1235.7127674425574,
        1235.7127674425574
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1235.9656710854472,
        "score_gap": 21.17851424939,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DRB3*03:01:03:02"
        ],
        [
          "IPD:HLA-DRB3*03:01:03:02"
        ]
      ]
    },
    "DRB4": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          529,
          537
        ]
      ],
      "score_gap": 16.549911707348656,
      "distinct_support": [
        98.75038586534303,
        11.072313363817887
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1176.9623692188648,
        "score_gap": -19.711245993002393,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          561,
          562
        ]
      ],
      "score_gap": 5.576237557892455
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          565,
          568
        ]
      ],
      "score_gap": 5.544763327052351
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          597,
          598
        ]
      ],
      "score_gap": 54.28235086245695,
      "distinct_support": [
        229.40378401354883,
        226.89712042895536
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 582.9384537756848,
        "score_gap": 23.529069455652348,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-F*01:01:02:09"
        ],
        [
          "IPD:HLA-F*01:01:01:09"
        ]
      ]
    },
    "G": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          629,
          631
        ]
      ],
      "score_gap": 21.2981495266431,
      "distinct_support": [
        131.9328074548466,
        107.94335395645908
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 491.94344155096854,
        "score_gap": 16.218111586243367,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-G*01:01:03:03"
        ],
        [
          "IPD:HLA-G*01:04:01:03"
        ]
      ]
    },
    "H": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          661,
          662
        ]
      ],
      "score_gap": 9.70229277817998
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          686,
          686
        ]
      ],
      "score_gap": 27.72339988546446,
      "distinct_support": [
        550.1132540259978,
        550.1132540259978
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 551.9655511510377,
        "score_gap": 27.326174596396044,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:02"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          718,
          720
        ]
      ],
      "score_gap": 29.017835649108747,
      "distinct_support": [
        54.7398109937624,
        37.0141042673174
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 107.92737026771509,
        "score_gap": 108.60496460876021,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:01:01:01"
        ],
        [
          "IPD:HLA-K*01:02"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          725,
          726
        ]
      ],
      "score_gap": 157.42327746620867,
      "distinct_support": [
        306.0145256419946,
        282.00272328564864
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 664.9353323539672,
        "score_gap": 68.03298788571891,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:03"
        ],
        [
          "IPD:HLA-L*01:01:01:01"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          734,
          736
        ]
      ],
      "score_gap": 0.6930371572962031
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          763,
          769
        ]
      ],
      "score_gap": 0.00025016628205776215
    },
    "N": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          795,
          797
        ]
      ],
      "score_gap": 25.80905991056352,
      "distinct_support": [
        16.971955050282908,
        6.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 35.94370594237692,
        "score_gap": 11.894814949671606,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-N*01:01:01:01"
        ],
        [
          "IPD:HLA-N*01:01:01:05"
        ]
      ]
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          799,
          800
        ]
      ],
      "score_gap": 251.98256858438253,
      "distinct_support": [
        160.0,
        41.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 478.9512781357737,
        "score_gap": 51.482032638570644,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:02"
        ],
        [
          "IPD:HLA-P*02:01:01:01"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          802,
          804
        ]
      ],
      "score_gap": 53.68949600419728,
      "distinct_support": [
        48.0,
        33.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 98.93760054084369,
        "score_gap": 30.166619280148126,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:03"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          807,
          808
        ]
      ],
      "score_gap": 108.8691634911811,
      "distinct_support": [
        16.0,
        15.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 203.96046467091043,
        "score_gap": 47.88233601071747,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*03:01:01:01"
        ],
        [
          "IPD:HLA-T*03:01:01:02"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          810,
          812
        ]
      ],
      "score_gap": 9.010200628719758
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          826,
          832
        ]
      ],
      "score_gap": 79.0131391028408,
      "distinct_support": [
        203.0,
        172.92896537551715
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 684.9468263230171,
        "score_gap": 41.79747510613356,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*02:01:03:01"
        ],
        [
          "IPD:TAP2*01:02:02"
        ]
      ]
    },
    "U": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          859,
          859
        ]
      ],
      "score_gap": null
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          860,
          861
        ]
      ],
      "score_gap": 85.39926482166629,
      "distinct_support": [
        11.0,
        11.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 322.9633419240314,
        "score_gap": 35.618971036971224,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:01"
        ],
        [
          "IPD:HLA-V*01:01:01:04"
        ]
      ]
    },
    "W": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          862,
          872
        ]
      ],
      "score_gap": 8.10020801340579
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 3642,
      "evidence_groups": 1600,
      "retained_groups": 33,
      "retained_paths": 35,
      "cutoff": 282.8156095068401
    },
    "B": {
      "observed_paths": 5611,
      "evidence_groups": 2264,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 254.57603317101677
    },
    "C": {
      "observed_paths": 6212,
      "evidence_groups": 2161,
      "retained_groups": 33,
      "retained_paths": 49,
      "cutoff": 343.461947712804
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 762.1779393725208
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 163,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 1002.3432370231654
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 167,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 387.6739262802077
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 123,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 420.0707386558033
    },
    "DPA1": {
      "observed_paths": 742,
      "evidence_groups": 686,
      "retained_groups": 32,
      "retained_paths": 42,
      "cutoff": 868.266675107004
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 628.9317121032959
    },
    "DPB1": {
      "observed_paths": 1847,
      "evidence_groups": 1464,
      "retained_groups": 33,
      "retained_paths": 36,
      "cutoff": 1147.1327422230734
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 56.0001867247238
    },
    "DQA1": {
      "observed_paths": 470,
      "evidence_groups": 216,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 430.81847606706685
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 40,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 154.63528503542432
    },
    "DQB1": {
      "observed_paths": 518,
      "evidence_groups": 471,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 603.7318549976654
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 265.99066300410306
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 432.1818416375103
    },
    "DRB1": {
      "observed_paths": 798,
      "evidence_groups": 335,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 1141.4782939116772
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 116,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 591.7177482749972
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 121,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 975.6958401583952
    },
    "DRB5": {
      "observed_paths": 60,
      "evidence_groups": 5,
      "retained_groups": 4,
      "retained_paths": 59,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 323,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 576.9595736837559
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 121,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 302.7243723457185
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 131,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 307.89268474657547
    },
    "H": {
      "observed_paths": 99,
      "evidence_groups": 36,
      "retained_groups": 25,
      "retained_paths": 37,
      "cutoff": 1.0
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 50.57234983487665
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 16.08810899488303
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 126.9854743580054
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 271,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 147.9277218286294
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 92,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 136.09112601071888
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 15.99480376693003
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 4,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 2.0990990990990985
    },
    "S": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 33.0
    },
    "T": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 188.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 369.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 84,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 415.7865262290053
    },
    "U": {
      "observed_paths": 1,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 33.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 2.946685178012625
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 13,
      "retained_paths": 13,
      "cutoff": 3.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 3,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            4
          ]
        ],
        "gene_fraction": 0.023744381930205883,
        "score_gap": 206.36981435044436
      },
      "B": {
        "pairs": [
          [
            33,
            34
          ]
        ],
        "gene_fraction": 0.02562721387869374,
        "score_gap": 463.45865835779114
      },
      "C": {
        "pairs": [
          [
            65,
            66
          ]
        ],
        "gene_fraction": 0.028573673897049144,
        "score_gap": 200.91042071819538
      },
      "DMA": {
        "pairs": [
          [
            98,
            98
          ]
        ],
        "gene_fraction": 0.025581242637669175,
        "score_gap": 7.624185297638178
      },
      "DMB": {
        "pairs": [
          [
            130,
            135
          ]
        ],
        "gene_fraction": 0.03435128775711146,
        "score_gap": 6.23806263730512
      },
      "DOA": {
        "pairs": [
          [
            162,
            164
          ]
        ],
        "gene_fraction": 0.01937435996566803,
        "score_gap": 100.96526949384133
      },
      "DOB": {
        "pairs": [
          [
            195,
            209
          ]
        ],
        "gene_fraction": 0.023424573973731662,
        "score_gap": 56.2108686985448
      },
      "DPA1": {
        "pairs": [
          [
            227,
            230
          ]
        ],
        "gene_fraction": 0.05894206373696769,
        "score_gap": 205.79397956520552
      },
      "DPA2": {
        "pairs": [
          [
            259,
            262
          ]
        ],
        "gene_fraction": 0.03746837532726979,
        "score_gap": 449.7827735168976
      },
      "DPB1": {
        "pairs": [
          [
            265,
            266
          ]
        ],
        "gene_fraction": 0.06855464343025261,
        "score_gap": 301.43948980083223
      },
      "DPB2": {
        "pairs": [
          [
            298,
            299
          ]
        ],
        "gene_fraction": 0.09451841630878897,
        "score_gap": 2561.611162675079
      },
      "DQA1": {
        "pairs": [
          [
            305,
            308
          ]
        ],
        "gene_fraction": 0.038138285335422704,
        "score_gap": 266.1087108568172
      },
      "DQA2": {
        "pairs": [
          [
            337,
            341
          ]
        ],
        "gene_fraction": 0.02974753005862281,
        "score_gap": 13.892797807056922
      },
      "DQB1": {
        "pairs": [
          [
            369,
            373
          ]
        ],
        "gene_fraction": 0.044107765699936984,
        "score_gap": 10.001288300845772
      },
      "DQB2": {
        "pairs": [
          [
            401,
            407
          ]
        ],
        "gene_fraction": 0.039042372505989,
        "score_gap": 261.83661458990537
      },
      "DRA": {
        "pairs": [
          [
            433,
            434
          ]
        ],
        "gene_fraction": 0.02566777871865706,
        "score_gap": 39.91901056279312
      },
      "DRB1": {
        "pairs": [
          [
            465,
            474
          ]
        ],
        "gene_fraction": 0.11106376260103454,
        "score_gap": 86.80195653182454
      },
      "DRB3": {
        "pairs": [
          [
            497,
            497
          ]
        ],
        "gene_fraction": 0.03601227619481141,
        "score_gap": 21.486701814777916
      },
      "DRB4": {
        "pairs": [
          [
            529,
            537
          ]
        ],
        "gene_fraction": 0.03429309964070898,
        "score_gap": 16.549911707348656
      },
      "DRB5": {
        "pairs": [
          [
            561,
            562
          ]
        ],
        "gene_fraction": 0.00031878152068562723,
        "score_gap": 5.576237557892455
      },
      "E": {
        "pairs": [
          [
            565,
            568
          ]
        ],
        "gene_fraction": 0.01931671159414845,
        "score_gap": 5.544763327052351
      },
      "F": {
        "pairs": [
          [
            597,
            598
          ]
        ],
        "gene_fraction": 0.016985051519971556,
        "score_gap": 54.28235086245695
      },
      "G": {
        "pairs": [
          [
            629,
            631
          ]
        ],
        "gene_fraction": 0.0143337339395938,
        "score_gap": 21.2981495266431
      },
      "H": {
        "pairs": [
          [
            661,
            662
          ]
        ],
        "gene_fraction": 0.007918181392917745,
        "score_gap": 9.70229277817998
      },
      "J": {
        "pairs": [
          [
            686,
            686
          ]
        ],
        "gene_fraction": 0.016082595449370754,
        "score_gap": 27.72339988546446
      },
      "K": {
        "pairs": [
          [
            718,
            720
          ]
        ],
        "gene_fraction": 0.0031446749343735265,
        "score_gap": 29.017835649108747
      },
      "L": {
        "pairs": [
          [
            725,
            726
          ]
        ],
        "gene_fraction": 0.019374190884858835,
        "score_gap": 157.42327746620867
      },
      "MICA": {
        "pairs": [
          [
            734,
            736
          ]
        ],
        "gene_fraction": 0.009087497292621717,
        "score_gap": 0.6930371572962031
      },
      "MICB": {
        "pairs": [
          [
            763,
            769
          ]
        ],
        "gene_fraction": 0.009497231502827766,
        "score_gap": 0.00025016628205776215
      },
      "N": {
        "pairs": [
          [
            795,
            797
          ]
        ],
        "gene_fraction": 0.001047290146426995,
        "score_gap": 25.80905991056352
      },
      "P": {
        "pairs": [
          [
            799,
            800
          ]
        ],
        "gene_fraction": 0.013955181858452261,
        "score_gap": 251.98256858438253
      },
      "S": {
        "pairs": [
          [
            802,
            804
          ]
        ],
        "gene_fraction": 0.0028827404180594963,
        "score_gap": 53.68949600419728
      },
      "T": {
        "pairs": [
          [
            807,
            808
          ]
        ],
        "gene_fraction": 0.005942786888983575,
        "score_gap": 108.8691634911811
      },
      "TAP1": {
        "pairs": [
          [
            810,
            812
          ]
        ],
        "gene_fraction": 0.018238537380116302,
        "score_gap": 9.010200628719758
      },
      "TAP2": {
        "pairs": [
          [
            826,
            832
          ]
        ],
        "gene_fraction": 0.01995726488535837,
        "score_gap": 79.0131391028408
      },
      "U": {
        "pairs": [
          [
            859,
            859
          ]
        ],
        "gene_fraction": 0.0009605195165381586,
        "score_gap": null
      },
      "V": {
        "pairs": [
          [
            860,
            861
          ]
        ],
        "gene_fraction": 0.00941016837381542,
        "score_gap": 85.39926482166629
      },
      "W": {
        "pairs": [
          [
            862,
            872
          ]
        ],
        "gene_fraction": 0.01331375690228819,
        "score_gap": 8.10020801340579
      }
    },
    "unassigned_fragments": 1874,
    "objective_trace": [
      -160642.18911333015,
      -160642.1880340996,
      -160642.1880340902
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}
