{
  "decisions": {
    "A": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          0,
          0
        ]
      ],
      "score_gap": 0.6931051168066915
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          32,
          35
        ]
      ],
      "score_gap": 123.28455600800226,
      "distinct_support": [
        302.9568791389338,
        280.20999073322423
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 602.9484308826143,
        "score_gap": 101.28044018172324,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG134c2b4f7eb7a3ec9a6dc74ad37004932ec4bb9ea39ad34cde54734d18210ff1#0#HLA_B",
          "PGb5eba111657948d068f64aeba7712b7cd1d4356c30e0b245cc0d26eb5ae028e7#0#HLA_B"
        ],
        [
          "PG1ea664cd9cff3ae902ab45565adc6e6743f7e3a0ba4570b7d7021a7419b35edb#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          67,
          68
        ]
      ],
      "score_gap": 123.86943359022553,
      "distinct_support": [
        302.72544836683255,
        293.3735219476016
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 620.9081989836714,
        "score_gap": 74.51206686621646,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG523621de3a30bdbf3d9138fe86dabf21c823eb7a30c1612ac8084d013b94274b#0#HLA_C",
          "PG6dd1335e7b776c3f893e865e3ac2134a90411111d94173f81dc029348894406c#0#HLA_C",
          "PGaf80c91cba0eff9e05b41cee2a4f35a9e1daa2ea7888696ccf837cf5f5d5c2db#0#HLA_C",
          "PGbf78ac4252690b16aba4efb8b1e3a74add89b1d2ebf0c356119e9d73546a2513#0#HLA_C",
          "PGedc4dca795b954a3e98d4cca8cef1cbdb7dd7ce45e4f0a6f7efe001fccc2c251#0#HLA_C"
        ],
        [
          "PG09c558a76493ea9697f343b0521258f809d2e4f5e65b8c1cd9b537eaf5e5dbcf#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          99,
          99
        ]
      ],
      "score_gap": 9.010456081479788
    },
    "DMB": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          131,
          137
        ]
      ],
      "score_gap": 10.396757608090411,
      "distinct_support": [
        46.00965469443983,
        23.09498110893071
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 772.9747271925296,
        "score_gap": 4.402064314010332,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DOA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          163,
          171
        ]
      ],
      "score_gap": 6.237857056563371
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          195,
          210
        ]
      ],
      "score_gap": 49.98965340187715,
      "distinct_support": [
        168.82339569785464,
        141.70320164231305
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 480.9617640766712,
        "score_gap": 24.212736851996908,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:28"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          227,
          260
        ]
      ],
      "score_gap": 157.44968191121006,
      "distinct_support": [
        611.6854347546698,
        397.38228572661205
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1045.721420337141,
        "score_gap": 66.6705954367452,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG6b848a3a007b2f38f29b4654cd8e1774b6a85b3f0896731f4f950d948629d56c#0#HLA_DPA1"
        ],
        [
          "PG18571131a7301cf40b856c907d2a9ce85d13578dcb08ed2592f1fec71f06bfbc#0#HLA_DPA1",
          "PG22dee041d2a1ae0cdc1936bc6522017e2909f1ccc1da4d739555c5fdb313446c#0#HLA_DPA1",
          "PG892c293c0d45abee5094160addb0b11092581d47593f5606a221ab3650f466f3#0#HLA_DPA1",
          "PG8c618a56c65896fe8383b8bbbcf98e4cbe441866e8baad5d8a0d09c4b33bf12f#0#HLA_DPA1",
          "PG9d0856b4eae334b6b07728578193addd69fae4715bd7b986b6e23f93b203edee#0#HLA_DPA1",
          "PGa96c861416ca458b87d085f65dbf61eb70d19ea3c4efd0945308fdeb2d76936a#0#HLA_DPA1",
          "PGe36d9854b1f65c4e961ff2e3d6a3c4baf1d3a24780e3fd3dfbf7611b099cea6e#0#HLA_DPA1",
          "PGe3b392560417a4ee51383a62c8b7f43764e4b74412423d68f43a5afda209e480#0#HLA_DPA1",
          "PGedeab458548ede10fb862577959e245f62a0cad73fdf04f1ba8558390f167a63#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          263,
          263
        ]
      ],
      "score_gap": 31.190487323096022,
      "distinct_support": [
        917.3511557869815,
        917.3511557869815
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 917.9768076792348,
        "score_gap": 30.743082251375057,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ]
      ]
    },
    "DPB1": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          271,
          276
        ]
      ],
      "score_gap": 30.091115146002267,
      "distinct_support": [
        156.7429789490911,
        139.920895110848
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1532.8970533057031,
        "score_gap": 2.52986850246009,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          301,
          301
        ]
      ],
      "score_gap": 1191.704826388479,
      "distinct_support": [
        2144.9386917530696,
        2144.9386917530696
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2148.9751446845266,
        "score_gap": 1182.6009957215065,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*01:01:02"
        ],
        [
          "IPD:HLA-DPB2*01:01:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          307,
          311
        ]
      ],
      "score_gap": 134.31135583523428,
      "distinct_support": [
        458.833386314915,
        418.4435094944313
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 876.9505107716832,
        "score_gap": 54.89730652391631,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG9dc6588bb49c5195522235b008c0c96a0c89c2b96170acadd7650399804b031b#0#HLA_DQA1"
        ],
        [
          "PG5b61ea9339aab2ad28f10f39a677c16ad7bb98d6c060df8bce5f091adb068ffd#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          339,
          342
        ]
      ],
      "score_gap": 30.57845720887417,
      "distinct_support": [
        95.83066125831874,
        46.15771908422562
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 586.9711994789744,
        "score_gap": 49.2609590173567,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:01:02:01"
        ],
        [
          "IPD:HLA-DQA2*01:01:02:07"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          371,
          372
        ]
      ],
      "score_gap": 120.72161500205402,
      "distinct_support": [
        544.1576129531775,
        537.4727489794241
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1076.9538420311596,
        "score_gap": 47.06166805142675,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG5b338b8d04bb1fa26725dd752f870f9e076463044c8377b805f208d644f38198#0#HLA_DQB1"
        ],
        [
          "PGb7ccf6eee0da9ba079fbad27c261c61e2672b03288b21adfa5c81b657fe6b504#0#HLA_DQB1",
          "PGc72a3ca699df47d0c749c1960687ed05c444406c4ec8e96aa7b14edec5cd2c39#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          404,
          407
        ]
      ],
      "score_gap": 110.15978131236625,
      "distinct_support": [
        65.96759769323344,
        55.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 832.9734460094464,
        "score_gap": 40.229473430224715,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:07:01:02"
        ]
      ]
    },
    "DRA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          436,
          437
        ]
      ],
      "score_gap": 8.317311103921384
    },
    "DRB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          469,
          481
        ]
      ],
      "score_gap": 124.49735130890622,
      "distinct_support": [
        2205.796064167268,
        905.2601786697419
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 3360.6265642136523,
        "score_gap": 44.507496264298425,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGa2ff6dda1dcdfa4d4bfdc6c8d7c79f616f78c1c79ae5c735a182b8e301bfb42c#0#HLA_DRB1"
        ],
        [
          "PGae80ff6133e2dda09e9f0bada889c9d5e05cc93dd7331603164ee61f6b1d308f#0#HLA_DRB1"
        ]
      ]
    },
    "DRB3": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          501,
          502
        ]
      ],
      "score_gap": 0.7386649962136289
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          533,
          533
        ]
      ],
      "score_gap": 9.129921249492327
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          565,
          566
        ]
      ],
      "score_gap": 0.6885109167778865
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          568,
          571
        ]
      ],
      "score_gap": 4.15859040588839
    },
    "F": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          600,
          600
        ]
      ],
      "score_gap": 2.079256182158133
    },
    "G": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          633,
          634
        ]
      ],
      "score_gap": 5.544561630813405
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          665,
          665
        ]
      ],
      "score_gap": 12.475483398811775,
      "distinct_support": [
        356.4711710118145,
        356.4711710118145
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 357.9767211810869,
        "score_gap": 12.296746763808704,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:02"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          697,
          700
        ]
      ],
      "score_gap": 119.11949590532458,
      "distinct_support": [
        202.0049361795112,
        183.07238659824952
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 441.95664489933296,
        "score_gap": 50.9803078431454,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          704,
          707
        ]
      ],
      "score_gap": 7.508471330118482
    },
    "MICB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          735,
          737
        ]
      ],
      "score_gap": 33.35005524866574,
      "distinct_support": [
        86.57579833405168,
        71.95692283081448
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 193.5532967335679,
        "score_gap": 15.684138189393877,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:MICB*002:01:37"
        ],
        [
          "IPD:MICB*004:01:01",
          "IPD:MICB*004:01:07",
          "IPD:MICB*004:01:40",
          "IPD:MICB*004:01:49"
        ]
      ]
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          767,
          769
        ]
      ],
      "score_gap": 4.421090873074718
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          771,
          771
        ]
      ],
      "score_gap": 86.63411479986098,
      "distinct_support": [
        312.0,
        312.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 311.97682936857257,
        "score_gap": 85.39326402488682,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:02"
        ],
        [
          "IPD:HLA-P*02:01:01:02"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          773,
          773
        ]
      ],
      "score_gap": 14.549853464981425,
      "distinct_support": [
        78.0,
        78.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 77.97682936856725,
        "score_gap": 14.342871893196017,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:03"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "TAP1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          778,
          778
        ]
      ],
      "score_gap": 13.168865708314115,
      "distinct_support": [
        473.0,
        473.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 472.9768293685732,
        "score_gap": 12.980104262937147,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP1*01:01:01:05"
        ],
        [
          "IPD:TAP1*01:01:01:05"
        ]
      ]
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          795,
          801
        ]
      ],
      "score_gap": 38.031346335308626,
      "distinct_support": [
        130.92323355933866,
        114.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 463.96458214176255,
        "score_gap": 22.012185146687415,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*01:05:01:03"
        ],
        [
          "IPD:TAP2*02:01:03:01"
        ]
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          827,
          827
        ]
      ],
      "score_gap": 13.860911200899864,
      "distinct_support": [
        228.0,
        228.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 227.97682936857183,
        "score_gap": 13.662548388662085,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:04"
        ],
        [
          "IPD:HLA-V*01:01:01:04"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          829,
          829
        ]
      ],
      "score_gap": 65.14886292455776,
      "distinct_support": [
        316.77963159926867,
        316.77963159926867
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 318.9766225556757,
        "score_gap": 64.21574041806396,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*01:01:01:07"
        ],
        [
          "IPD:HLA-W*01:01:01:07"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 950,
      "evidence_groups": 828,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 358.61957873601057
    },
    "B": {
      "observed_paths": 5423,
      "evidence_groups": 2039,
      "retained_groups": 35,
      "retained_paths": 39,
      "cutoff": 215.04130919572512
    },
    "C": {
      "observed_paths": 4246,
      "evidence_groups": 1593,
      "retained_groups": 32,
      "retained_paths": 48,
      "cutoff": 220.76020613255008
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 559.6681998790383
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 678.7975611429268
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 160,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 298.8047899971574
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 290.3732195560169
    },
    "DPA1": {
      "observed_paths": 750,
      "evidence_groups": 658,
      "retained_groups": 36,
      "retained_paths": 57,
      "cutoff": 527.6851010952196
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 161.0
    },
    "DPB1": {
      "observed_paths": 1851,
      "evidence_groups": 1205,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 1220.6701803848296
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 2.0
    },
    "DQA1": {
      "observed_paths": 512,
      "evidence_groups": 370,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 310.89654228022584
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 88.74829181137756
    },
    "DQB1": {
      "observed_paths": 900,
      "evidence_groups": 459,
      "retained_groups": 33,
      "retained_paths": 36,
      "cutoff": 436.1576129531775
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 165.09554605304683
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 117,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 533.9721058439497
    },
    "DRB1": {
      "observed_paths": 892,
      "evidence_groups": 410,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 974.8528274702496
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 209,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 769.4761758954742
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 119,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 779.053326433223
    },
    "DRB5": {
      "observed_paths": 62,
      "evidence_groups": 5,
      "retained_groups": 3,
      "retained_paths": 32,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 312,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 394.7962357063347
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 108,
      "retained_groups": 33,
      "retained_paths": 34,
      "cutoff": 313.7789938041159
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 205.86164815852814
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 36.91422530215276
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 83.92761340175048
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 247,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 79.6160153407111
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 79,
      "retained_groups": 32,
      "retained_paths": 46,
      "cutoff": 73.88148133334278
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 5.0
    },
    "P": {
      "observed_paths": 3,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 1.0
    },
    "S": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 11.00000000026129
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 255.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 85,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 263.90040286699434
    },
    "V": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 208.0
    },
    "W": {
      "observed_paths": 12,
      "evidence_groups": 12,
      "retained_groups": 11,
      "retained_paths": 11,
      "cutoff": 1.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 4,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            0
          ]
        ],
        "gene_fraction": 0.023771963425756583,
        "score_gap": 0.6931051168066915
      },
      "B": {
        "pairs": [
          [
            32,
            35
          ]
        ],
        "gene_fraction": 0.026410494086622965,
        "score_gap": 123.28455600800226
      },
      "C": {
        "pairs": [
          [
            67,
            68
          ]
        ],
        "gene_fraction": 0.027487685730830824,
        "score_gap": 123.86943359022553
      },
      "DMA": {
        "pairs": [
          [
            99,
            99
          ]
        ],
        "gene_fraction": 0.028526487570153716,
        "score_gap": 9.010456081479788
      },
      "DMB": {
        "pairs": [
          [
            131,
            137
          ]
        ],
        "gene_fraction": 0.0333601062897642,
        "score_gap": 10.396757608090411
      },
      "DOA": {
        "pairs": [
          [
            163,
            171
          ]
        ],
        "gene_fraction": 0.019247037298796052,
        "score_gap": 6.237857056563371
      },
      "DOB": {
        "pairs": [
          [
            195,
            210
          ]
        ],
        "gene_fraction": 0.02075738702148149,
        "score_gap": 49.98965340187715
      },
      "DPA1": {
        "pairs": [
          [
            227,
            260
          ]
        ],
        "gene_fraction": 0.04539026927895901,
        "score_gap": 157.44968191121006
      },
      "DPA2": {
        "pairs": [
          [
            263,
            263
          ]
        ],
        "gene_fraction": 0.0396181179004027,
        "score_gap": 31.190487323096022
      },
      "DPB1": {
        "pairs": [
          [
            271,
            276
          ]
        ],
        "gene_fraction": 0.06676110005715898,
        "score_gap": 30.091115146002267
      },
      "DPB2": {
        "pairs": [
          [
            301,
            301
          ]
        ],
        "gene_fraction": 0.09274564448262432,
        "score_gap": 1191.704826388479
      },
      "DQA1": {
        "pairs": [
          [
            307,
            311
          ]
        ],
        "gene_fraction": 0.03797696905912649,
        "score_gap": 134.31135583523428
      },
      "DQA2": {
        "pairs": [
          [
            339,
            342
          ]
        ],
        "gene_fraction": 0.025332550877114494,
        "score_gap": 30.57845720887417
      },
      "DQB1": {
        "pairs": [
          [
            371,
            372
          ]
        ],
        "gene_fraction": 0.046781355363658586,
        "score_gap": 120.72161500205402
      },
      "DQB2": {
        "pairs": [
          [
            404,
            407
          ]
        ],
        "gene_fraction": 0.03594953588764312,
        "score_gap": 110.15978131236625
      },
      "DRA": {
        "pairs": [
          [
            436,
            437
          ]
        ],
        "gene_fraction": 0.026368513620804144,
        "score_gap": 8.317311103921384
      },
      "DRB1": {
        "pairs": [
          [
            469,
            481
          ]
        ],
        "gene_fraction": 0.14508135259582147,
        "score_gap": 124.49735130890622
      },
      "DRB3": {
        "pairs": [
          [
            501,
            502
          ]
        ],
        "gene_fraction": 0.036294931236443735,
        "score_gap": 0.7386649962136289
      },
      "DRB4": {
        "pairs": [
          [
            533,
            533
          ]
        ],
        "gene_fraction": 0.040394962150017345,
        "score_gap": 9.129921249492327
      },
      "DRB5": {
        "pairs": [
          [
            565,
            566
          ]
        ],
        "gene_fraction": 0.0002141915199047288,
        "score_gap": 0.6885109167778865
      },
      "E": {
        "pairs": [
          [
            568,
            571
          ]
        ],
        "gene_fraction": 0.020498902605345096,
        "score_gap": 4.15859040588839
      },
      "F": {
        "pairs": [
          [
            600,
            600
          ]
        ],
        "gene_fraction": 0.016183279969408226,
        "score_gap": 2.079256182158133
      },
      "G": {
        "pairs": [
          [
            633,
            634
          ]
        ],
        "gene_fraction": 0.012989455687237642,
        "score_gap": 5.544561630813405
      },
      "J": {
        "pairs": [
          [
            665,
            665
          ]
        ],
        "gene_fraction": 0.015449588514815388,
        "score_gap": 12.475483398811775
      },
      "L": {
        "pairs": [
          [
            697,
            700
          ]
        ],
        "gene_fraction": 0.01907400090801793,
        "score_gap": 119.11949590532458
      },
      "MICA": {
        "pairs": [
          [
            704,
            707
          ]
        ],
        "gene_fraction": 0.007290703145022509,
        "score_gap": 7.508471330118482
      },
      "MICB": {
        "pairs": [
          [
            735,
            737
          ]
        ],
        "gene_fraction": 0.008353388946479271,
        "score_gap": 33.35005524866574
      },
      "N": {
        "pairs": [
          [
            767,
            769
          ]
        ],
        "gene_fraction": 0.0008183174967919315,
        "score_gap": 4.421090873074718
      },
      "P": {
        "pairs": [
          [
            771,
            771
          ]
        ],
        "gene_fraction": 0.01346432143395847,
        "score_gap": 86.63411479986098
      },
      "S": {
        "pairs": [
          [
            773,
            773
          ]
        ],
        "gene_fraction": 0.0033653303577397377,
        "score_gap": 14.549853464981425
      },
      "TAP1": {
        "pairs": [
          [
            778,
            778
          ]
        ],
        "gene_fraction": 0.020412772559049188,
        "score_gap": 13.168865708314115
      },
      "TAP2": {
        "pairs": [
          [
            795,
            801
          ]
        ],
        "gene_fraction": 0.020023821258006898,
        "score_gap": 38.031346335308626
      },
      "V": {
        "pairs": [
          [
            827,
            827
          ]
        ],
        "gene_fraction": 0.009839042586085051,
        "score_gap": 13.860911200899864
      },
      "W": {
        "pairs": [
          [
            829,
            829
          ]
        ],
        "gene_fraction": 0.0137664190789578,
        "score_gap": 65.14886292455776
      }
    },
    "unassigned_fragments": 1674,
    "objective_trace": [
      -107812.90869714509,
      -107812.89869136656,
      -107812.89869135263,
      -107812.89869135263
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}
