{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          1
        ]
      ],
      "score_gap": 126.95772772243072,
      "distinct_support": [
        266.90666438922744,
        242.823276039189
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 511.74300785205713,
        "score_gap": 74.51167030050158,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG00cb7d93ac39b1f255145bb7f4101d678f4660f6970ef48954c9a5c01677441c#0#HLA_A",
          "PG4ebff93a7e70bcbc6c886d8dfbd522922ee8971d45383168a3e18e80a16f9031#0#HLA_A"
        ],
        [
          "PG44cbc4fa7613c62fd4b1278ef57d9cefa2364d172bffe44d46b600f2a8da1485#0#HLA_A",
          "PG6006cc5ad076b0add2a651dff0d8d550b4898f3b7df5a876aa0228fb6a9349ad#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          32,
          33
        ]
      ],
      "score_gap": 203.47968519700225,
      "distinct_support": [
        330.06329062794487,
        310.13014173515546
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 653.803655456994,
        "score_gap": 149.02571259857598,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGb5eba111657948d068f64aeba7712b7cd1d4356c30e0b245cc0d26eb5ae028e7#0#HLA_B"
        ],
        [
          "PG1ea664cd9cff3ae902ab45565adc6e6743f7e3a0ba4570b7d7021a7419b35edb#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          65,
          66
        ]
      ],
      "score_gap": 106.39354001345055,
      "distinct_support": [
        298.1259457958585,
        291.2450328900908
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 641.621518130618,
        "score_gap": 74.51279412297754,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG09c558a76493ea9697f343b0521258f809d2e4f5e65b8c1cd9b537eaf5e5dbcf#0#HLA_C",
          "PGb5e1d8ec21508d1832879e3ba6706ae956424bc617574947a77a7dd17270f3da#0#HLA_C"
        ],
        [
          "PG33a386a8bc88bb63738e3f5c3415c951c76d0214934ff586bf79f60b946c26bb#0#HLA_C",
          "PG523621de3a30bdbf3d9138fe86dabf21c823eb7a30c1612ac8084d013b94274b#0#HLA_C",
          "PG6dd1335e7b776c3f893e865e3ac2134a90411111d94173f81dc029348894406c#0#HLA_C",
          "PGb8493c7996e451bd5a90cacf00671ef9825caf5c5c80bed9f651fd770af96127#0#HLA_C",
          "PGbf78ac4252690b16aba4efb8b1e3a74add89b1d2ebf0c356119e9d73546a2513#0#HLA_C",
          "PGedc4dca795b954a3e98d4cca8cef1cbdb7dd7ce45e4f0a6f7efe001fccc2c251#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          97,
          100
        ]
      ],
      "score_gap": 33.42981014630641,
      "distinct_support": [
        97.23388095917451,
        85.38103087699065
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 561.9728548815062,
        "score_gap": 14.169270184190367,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:01"
        ],
        [
          "IPD:HLA-DMA*01:01:01:03"
        ]
      ]
    },
    "DMB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          131,
          132
        ]
      ],
      "score_gap": 54.64700490498217,
      "distinct_support": [
        101.98858166079586,
        101.95448002102901
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 749.9740590827528,
        "score_gap": 25.07422647130082,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMB*01:03:01:03"
        ],
        [
          "IPD:HLA-DMB*01:02:01:01"
        ]
      ]
    },
    "DOA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          162,
          165
        ]
      ],
      "score_gap": 4.851650949305622
    },
    "DOB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          193,
          193
        ]
      ],
      "score_gap": 4.851711204944877
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          225,
          258
        ]
      ],
      "score_gap": 63.94366917872685,
      "distinct_support": [
        586.7964793838714,
        335.6638593060215
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 963.9603587541553,
        "score_gap": 58.82713372610863,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG6b848a3a007b2f38f29b4654cd8e1774b6a85b3f0896731f4f950d948629d56c#0#HLA_DPA1"
        ],
        [
          "PG18571131a7301cf40b856c907d2a9ce85d13578dcb08ed2592f1fec71f06bfbc#0#HLA_DPA1",
          "PG22dee041d2a1ae0cdc1936bc6522017e2909f1ccc1da4d739555c5fdb313446c#0#HLA_DPA1",
          "PG22f8f4ceafd0f3d229c5d9e982d19b974e07bcff18a3e1a594f1ca6dde13cfa7#0#HLA_DPA1",
          "PG892c293c0d45abee5094160addb0b11092581d47593f5606a221ab3650f466f3#0#HLA_DPA1",
          "PG8c618a56c65896fe8383b8bbbcf98e4cbe441866e8baad5d8a0d09c4b33bf12f#0#HLA_DPA1",
          "PG9d0856b4eae334b6b07728578193addd69fae4715bd7b986b6e23f93b203edee#0#HLA_DPA1",
          "PGa96c861416ca458b87d085f65dbf61eb70d19ea3c4efd0945308fdeb2d76936a#0#HLA_DPA1",
          "PGe36d9854b1f65c4e961ff2e3d6a3c4baf1d3a24780e3fd3dfbf7611b099cea6e#0#HLA_DPA1",
          "PGe3b392560417a4ee51383a62c8b7f43764e4b74412423d68f43a5afda209e480#0#HLA_DPA1",
          "PGedeab458548ede10fb862577959e245f62a0cad73fdf04f1ba8558390f167a63#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          261,
          264
        ]
      ],
      "score_gap": 100.86601989650808,
      "distinct_support": [
        338.00000000000006,
        237.86355895869087
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 794.964880060136,
        "score_gap": 41.26726111361563,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:02"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          267,
          275
        ]
      ],
      "score_gap": 14.611168467803509,
      "distinct_support": [
        605.5512021014883,
        587.4284884889768
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1402.9618844561062,
        "score_gap": 35.296733453023876,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG785928fac5337e03158a9dd792fe123e243c003851968622fbf82c0bf1bdcd0d#0#HLA_DPB1"
        ],
        [
          "PG4d0afdc13fdd93f6128ca02fc92d5d75e13123b8d824e06fd1d1bb94aaac7439#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          302,
          303
        ]
      ],
      "score_gap": 1841.6121301526728,
      "distinct_support": [
        837.0,
        832.6230758281854
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1919.9618956776262,
        "score_gap": 670.4406518620192,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*01:01:02"
        ],
        [
          "IPD:HLA-DPB2*03:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          309,
          313
        ]
      ],
      "score_gap": 155.73840446342365,
      "distinct_support": [
        412.9522188848463,
        364.78265938664345
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 783.5437605350432,
        "score_gap": 86.27895479253425,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG90a466cc495cde556081283de1e8553162b1846c245f3495d3bf95d052586e30#0#HLA_DQA1"
        ],
        [
          "PG0fdcbe041ba44f285fe534ffc08da927b613237b67005eaff1edb57982d0c951#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          342,
          343
        ]
      ],
      "score_gap": 10.556000248237979,
      "distinct_support": [
        28.0,
        20.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 568.9776709052426,
        "score_gap": 15.536307969324646,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:08"
        ],
        [
          "IPD:HLA-DQA2*01:01:01:03"
        ]
      ]
    },
    "DQB1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          374,
          374
        ]
      ],
      "score_gap": 1.201311355966027
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          406,
          406
        ]
      ],
      "score_gap": 29.804283299206872,
      "distinct_support": [
        837.9205242780818,
        837.9205242780818
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 837.9796234168014,
        "score_gap": 28.010389793395625,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:02:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:02:01:01"
        ]
      ]
    },
    "DRA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          438,
          445
        ]
      ],
      "score_gap": 26.694975433318177,
      "distinct_support": [
        237.40111824672715,
        221.93325873575805
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 563.9630121719509,
        "score_gap": 15.358273342163727,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DRA*01:02:02:08"
        ],
        [
          "IPD:HLA-DRA*01:02:02:11"
        ]
      ]
    },
    "DRB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          470,
          471
        ]
      ],
      "score_gap": 97.97302874934394,
      "distinct_support": [
        1163.5026397069619,
        1059.9603495688655
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2199.2331967106597,
        "score_gap": 54.9066123851851,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG34d6f06262048fb7cc4ee98daaad8c2e507ed6e9923ecde093e8e8fce60b697f#0#HLA_DRB1",
          "PG4829091f2587db127f28f6824dda5b4b60224f09caa2450309680c1f9d6e0870#0#HLA_DRB1",
          "PG55aa4aa35bf04e2b5f298737324dcfe2f5565a0c6b037ed9ed7ceb8ae60ac999#0#HLA_DRB1",
          "PGcd1f26233a3c95f9fb6785bfaec3af5f43c3aec85fc83e0fc8c27554c84bf2d8#0#HLA_DRB1",
          "PGe83d7e17907285e37d042c64b50899a8448bec203760e03a53808a351acd4a96#0#HLA_DRB1",
          "PGfbf2c3347e090a1fc328a2f579e72e109fafc8395a1cff1870097aa75ac7dc0b#0#HLA_DRB1"
        ],
        [
          "PGcc80e245df2d2f889bcb4899c8fe6347bc68072e9a71f4723ed1da9c863449bb#0#HLA_DRB1"
        ]
      ]
    },
    "DRB3": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          502,
          504
        ]
      ],
      "score_gap": 1.5433847384701949
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          534,
          535
        ]
      ],
      "score_gap": 3.614852183207404
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          536,
          536
        ]
      ],
      "score_gap": 3.4654856050328817
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          568,
          570
        ]
      ],
      "score_gap": 18.713569783460116,
      "distinct_support": [
        97.97904687671026,
        75.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 391.9706261322225,
        "score_gap": 15.686262601075939,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-F*01:01:01:13"
        ],
        [
          "IPD:HLA-F*01:01:01:09",
          "IPD:HLA-F*01:01:01:12"
        ]
      ]
    },
    "G": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          600,
          633
        ]
      ],
      "score_gap": 8.98106115401606
    },
    "H": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          634,
          634
        ]
      ],
      "score_gap": 0.6930214189633261
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          666,
          667
        ]
      ],
      "score_gap": 15.24802034260938,
      "distinct_support": [
        76.98624499085858,
        73.95435494926627
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 374.9713646845945,
        "score_gap": 15.029498790571168,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:02"
        ],
        [
          "IPD:HLA-J*01:01:01:05"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          698,
          698
        ]
      ],
      "score_gap": 121.97542052522476,
      "distinct_support": [
        194.0,
        194.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 193.97962536448762,
        "score_gap": 120.23001719748507,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:02"
        ],
        [
          "IPD:HLA-K*01:02"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          701,
          701
        ]
      ],
      "score_gap": 82.15694245271152,
      "distinct_support": [
        418.954481716494,
        418.954481716494
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 418.9796231293562,
        "score_gap": 153.8290759161057,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:02"
        ],
        [
          "IPD:HLA-L*01:01:02"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          707,
          710
        ]
      ],
      "score_gap": 0.6930229391437024
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          739,
          739
        ]
      ],
      "score_gap": 2.77082788903499
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          771,
          771
        ]
      ],
      "score_gap": 3.4243424121668795
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          775,
          776
        ]
      ],
      "score_gap": 416.0563934553502,
      "distinct_support": [
        67.0,
        52.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 296.9714621256278,
        "score_gap": 158.14672427678255,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:01"
        ],
        [
          "IPD:HLA-P*02:01:01:02"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          778,
          778
        ]
      ],
      "score_gap": 16.628124511014903,
      "distinct_support": [
        66.0,
        66.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 65.97962536448345,
        "score_gap": 16.391662615944895,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:03"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          783,
          783
        ]
      ],
      "score_gap": 14.552722024265677,
      "distinct_support": [
        126.97298340154872,
        126.97298340154872
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 126.97962096899127,
        "score_gap": 14.344832130197837,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*01:01:01:02"
        ],
        [
          "IPD:HLA-T*01:01:01:02"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          790,
          791
        ]
      ],
      "score_gap": 6.23783952544909
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          808,
          811
        ]
      ],
      "score_gap": 20.79300051028258,
      "distinct_support": [
        120.02405935684547,
        95.00086789746553
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 431.9694811611687,
        "score_gap": 20.49493880969851,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*01:03:02:04"
        ],
        [
          "IPD:TAP2*01:01:07:10"
        ]
      ]
    },
    "U": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          839,
          839
        ]
      ],
      "score_gap": null
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          840,
          841
        ]
      ],
      "score_gap": 68.03598696184054,
      "distinct_support": [
        12.0,
        9.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 196.97745364969444,
        "score_gap": 27.09379286213167,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:04"
        ],
        [
          "IPD:HLA-V*01:01:01:01"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          842,
          843
        ]
      ],
      "score_gap": 161.41783420811407,
      "distinct_support": [
        160.15243086633342,
        134.86502413946903
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 358.96267749335163,
        "score_gap": 68.53814525765898,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*01:01:01:07"
        ],
        [
          "IPD:HLA-W*03:01:01:01"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 3280,
      "evidence_groups": 2031,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 169.65854869728977
    },
    "B": {
      "observed_paths": 5519,
      "evidence_groups": 2123,
      "retained_groups": 33,
      "retained_paths": 35,
      "cutoff": 230.0832664111187
    },
    "C": {
      "observed_paths": 4723,
      "evidence_groups": 1547,
      "retained_groups": 32,
      "retained_paths": 61,
      "cutoff": 238.99096407509467
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 432.05403043457403
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 163,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 623.2888950716582
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 157,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 256.7842687551958
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 123,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 367.8714734390355
    },
    "DPA1": {
      "observed_paths": 758,
      "evidence_groups": 677,
      "retained_groups": 36,
      "retained_paths": 57,
      "cutoff": 524.7392483654573
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 400.6469395158535
    },
    "DPB1": {
      "observed_paths": 1857,
      "evidence_groups": 1382,
      "retained_groups": 35,
      "retained_paths": 38,
      "cutoff": 728.6754035718573
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 28.25025025025025
    },
    "DQA1": {
      "observed_paths": 310,
      "evidence_groups": 203,
      "retained_groups": 33,
      "retained_paths": 34,
      "cutoff": 294.85905674928364
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 34,
      "retained_groups": 32,
      "retained_paths": 40,
      "cutoff": 37.96184293813262
    },
    "DQB1": {
      "observed_paths": 480,
      "evidence_groups": 246,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 832.7958421541325
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 35,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 134.062121225077
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 105,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 278.33480777190175
    },
    "DRB1": {
      "observed_paths": 1025,
      "evidence_groups": 369,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 846.0053544129464
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 167,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 432.48091425156866
    },
    "DRB4": {
      "observed_paths": 104,
      "evidence_groups": 4,
      "retained_groups": 2,
      "retained_paths": 96,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 295,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 359.58807015721266
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 119,
      "retained_groups": 32,
      "retained_paths": 39,
      "cutoff": 260.90321201063887
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 173,
      "retained_groups": 34,
      "retained_paths": 38,
      "cutoff": 152.99820518576234
    },
    "H": {
      "observed_paths": 96,
      "evidence_groups": 72,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 72.91042336279996
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 42.679152758202655
    },
    "K": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 1.0
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 14.641882120149415
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 251,
      "retained_groups": 32,
      "retained_paths": 42,
      "cutoff": 76.9571333088149
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 90,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 115.52407273778165
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 7.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 4,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 2.0
    },
    "S": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 1.0
    },
    "T": {
      "observed_paths": 9,
      "evidence_groups": 8,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 1.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 219.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 84,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 251.90087384185796
    },
    "U": {
      "observed_paths": 1,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 22.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 0.9582501571857344
    },
    "W": {
      "observed_paths": 12,
      "evidence_groups": 12,
      "retained_groups": 12,
      "retained_paths": 12,
      "cutoff": 3.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 5,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            1
          ]
        ],
        "gene_fraction": 0.025656515423408178,
        "score_gap": 126.95772772243072
      },
      "B": {
        "pairs": [
          [
            32,
            33
          ]
        ],
        "gene_fraction": 0.03248171939960819,
        "score_gap": 203.47968519700225
      },
      "C": {
        "pairs": [
          [
            65,
            66
          ]
        ],
        "gene_fraction": 0.031736577687629185,
        "score_gap": 106.39354001345055
      },
      "DMA": {
        "pairs": [
          [
            97,
            100
          ]
        ],
        "gene_fraction": 0.027581983224741553,
        "score_gap": 33.42981014630641
      },
      "DMB": {
        "pairs": [
          [
            131,
            132
          ]
        ],
        "gene_fraction": 0.0368092012580521,
        "score_gap": 54.64700490498217
      },
      "DOA": {
        "pairs": [
          [
            162,
            165
          ]
        ],
        "gene_fraction": 0.018452856625565863,
        "score_gap": 4.851650949305622
      },
      "DOB": {
        "pairs": [
          [
            193,
            193
          ]
        ],
        "gene_fraction": 0.021938039733581848,
        "score_gap": 4.851711204944877
      },
      "DPA1": {
        "pairs": [
          [
            225,
            258
          ]
        ],
        "gene_fraction": 0.047704416929780905,
        "score_gap": 63.94366917872685
      },
      "DPA2": {
        "pairs": [
          [
            261,
            264
          ]
        ],
        "gene_fraction": 0.03901737921272212,
        "score_gap": 100.86601989650808
      },
      "DPB1": {
        "pairs": [
          [
            267,
            275
          ]
        ],
        "gene_fraction": 0.06925089336828325,
        "score_gap": 14.611168467803509
      },
      "DPB2": {
        "pairs": [
          [
            302,
            303
          ]
        ],
        "gene_fraction": 0.09423294442112531,
        "score_gap": 1841.6121301526728
      },
      "DQA1": {
        "pairs": [
          [
            309,
            313
          ]
        ],
        "gene_fraction": 0.038702213863581816,
        "score_gap": 155.73840446342365
      },
      "DQA2": {
        "pairs": [
          [
            342,
            343
          ]
        ],
        "gene_fraction": 0.02792578402673646,
        "score_gap": 10.556000248237979
      },
      "DQB1": {
        "pairs": [
          [
            374,
            374
          ]
        ],
        "gene_fraction": 0.049616722231262685,
        "score_gap": 1.201311355966027
      },
      "DQB2": {
        "pairs": [
          [
            406,
            406
          ]
        ],
        "gene_fraction": 0.04112857002885896,
        "score_gap": 29.804283299206872
      },
      "DRA": {
        "pairs": [
          [
            438,
            445
          ]
        ],
        "gene_fraction": 0.027679661403062845,
        "score_gap": 26.694975433318177
      },
      "DRB1": {
        "pairs": [
          [
            470,
            471
          ]
        ],
        "gene_fraction": 0.10826260615343519,
        "score_gap": 97.97302874934394
      },
      "DRB3": {
        "pairs": [
          [
            502,
            504
          ]
        ],
        "gene_fraction": 0.03951102623079358,
        "score_gap": 1.5433847384701949
      },
      "DRB4": {
        "pairs": [
          [
            534,
            535
          ]
        ],
        "gene_fraction": 0.00014557674216145503,
        "score_gap": 3.614852183207404
      },
      "E": {
        "pairs": [
          [
            536,
            536
          ]
        ],
        "gene_fraction": 0.019974727962059027,
        "score_gap": 3.4654856050328817
      },
      "F": {
        "pairs": [
          [
            568,
            570
          ]
        ],
        "gene_fraction": 0.01923816629285783,
        "score_gap": 18.713569783460116
      },
      "G": {
        "pairs": [
          [
            600,
            633
          ]
        ],
        "gene_fraction": 0.01590014579000004,
        "score_gap": 8.98106115401606
      },
      "H": {
        "pairs": [
          [
            634,
            634
          ]
        ],
        "gene_fraction": 0.007950061016148934,
        "score_gap": 0.6930214189633261
      },
      "J": {
        "pairs": [
          [
            666,
            667
          ]
        ],
        "gene_fraction": 0.018403831787176746,
        "score_gap": 15.24802034260938
      },
      "K": {
        "pairs": [
          [
            698,
            698
          ]
        ],
        "gene_fraction": 0.009520642724940156,
        "score_gap": 121.97542052522476
      },
      "L": {
        "pairs": [
          [
            701,
            701
          ]
        ],
        "gene_fraction": 0.02056378495202458,
        "score_gap": 82.15694245271152
      },
      "MICA": {
        "pairs": [
          [
            707,
            710
          ]
        ],
        "gene_fraction": 0.008047354383608565,
        "score_gap": 0.6930229391437024
      },
      "MICB": {
        "pairs": [
          [
            739,
            739
          ]
        ],
        "gene_fraction": 0.009373382447128872,
        "score_gap": 2.77082788903499
      },
      "N": {
        "pairs": [
          [
            771,
            771
          ]
        ],
        "gene_fraction": 0.001029692432283469,
        "score_gap": 3.4243424121668795
      },
      "P": {
        "pairs": [
          [
            775,
            776
          ]
        ],
        "gene_fraction": 0.014575547226229885,
        "score_gap": 416.0563934553502
      },
      "S": {
        "pairs": [
          [
            778,
            778
          ]
        ],
        "gene_fraction": 0.0032383217511239766,
        "score_gap": 16.628124511014903
      },
      "T": {
        "pairs": [
          [
            783,
            783
          ]
        ],
        "gene_fraction": 0.0062322401244743475,
        "score_gap": 14.552722024265677
      },
      "TAP1": {
        "pairs": [
          [
            790,
            791
          ]
        ],
        "gene_fraction": 0.018551410502258784,
        "score_gap": 6.23783952544909
      },
      "TAP2": {
        "pairs": [
          [
            808,
            811
          ]
        ],
        "gene_fraction": 0.02120133540121554,
        "score_gap": 20.79300051028258
      },
      "U": {
        "pairs": [
          [
            839,
            839
          ]
        ],
        "gene_fraction": 0.001078773916374667,
        "score_gap": null
      },
      "V": {
        "pairs": [
          [
            840,
            841
          ]
        ],
        "gene_fraction": 0.009667778033521524,
        "score_gap": 68.03598696184054
      },
      "W": {
        "pairs": [
          [
            842,
            843
          ]
        ],
        "gene_fraction": 0.01761811529218165,
        "score_gap": 161.41783420811407
      }
    },
    "unassigned_fragments": 668,
    "objective_trace": [
      -109565.73617775092,
      -109565.57369074132,
      -109565.57360031983,
      -109565.57360026939,
      -109565.57360026936
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}