{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          1
        ]
      ],
      "score_gap": 51.768975796265295,
      "distinct_support": [
        180.60914220674945,
        179.7790828089379
      ],
      "selected_paths": [
        [
          "PGdd26e6e71c70d089028deec76edddb8877b128924588842d575f7c72e91c2778#0#HLA_A"
        ],
        [
          "PG2ba74aaaf6f9a179966b7e291ca90db0177b0513a59db078f9193de52c6cecdb#0#HLA_A",
          "PG81b8d891cb0e4efd4a3be3acee86a8650f3d386ce68676616ba06e984fd9bd0f#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          32,
          33
        ]
      ],
      "score_gap": 28.14185429000645,
      "distinct_support": [
        219.81414482545586,
        201.95654737462547
      ],
      "selected_paths": [
        [
          "PG45a732c89495e9e9eaaa1c3b95fb82d24b518f4fd5f8ba078d34434dbc4da1bc#0#HLA_B"
        ],
        [
          "IPD:HLA-B*27:05:02:05"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          66,
          67
        ]
      ],
      "score_gap": 179.87181310469168,
      "distinct_support": [
        263.7784107912096,
        255.9314017693682
      ],
      "selected_paths": [
        [
          "PGd3652bfdbb47450559bcd810eab8c3f94d37d188d0a3d4909f7a45d6cd3ab0a7#0#HLA_C",
          "PGfc86244be33504942b38b41faea6420a8a761f20a34407ca15ec9e19f691c313#0#HLA_C"
        ],
        [
          "PG1ce03ffc55ba47eb414953e247f827e799547cd2eb92dba4b24c714da243356c#0#HLA_C",
          "PG2a2edcbdbfe86eb2bf2e4c413347362ba0b6291577c2f2d9e9d37c7f1ef5f3c1#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          98,
          99
        ]
      ],
      "score_gap": 7.624222172918962
    },
    "DMB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          130,
          132
        ]
      ],
      "score_gap": 16.634877247342956,
      "distinct_support": [
        40.0,
        35.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-DMB*01:01:01:26"
        ],
        [
          "IPD:HLA-DMB*01:01:01:03"
        ]
      ]
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          162,
          171
        ]
      ],
      "score_gap": 27.692245883197756,
      "distinct_support": [
        168.93423191636924,
        146.8788044957211
      ],
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:02:15"
        ],
        [
          "IPD:HLA-DOA*01:01:01:01"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          194,
          209
        ]
      ],
      "score_gap": 17.95821676538617,
      "distinct_support": [
        139.97264574437096,
        104.87698205515017
      ],
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:01"
        ]
      ]
    },
    "DPA1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          226,
          243
        ]
      ],
      "score_gap": 1.6971618883981137
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          258,
          259
        ]
      ],
      "score_gap": 125.2076702695922,
      "distinct_support": [
        123.0,
        106.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:01:02"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          264,
          265
        ]
      ],
      "score_gap": 14.555336073986837,
      "distinct_support": [
        84.25438676927143,
        82.70744994481036
      ],
      "selected_paths": [
        [
          "PG1a8957c7a33cf6d2105ef5748875ec9c9b08f6e2b1cb3901da9bc9559688f96b#0#HLA_DPB1"
        ],
        [
          "PG51af5fd959b992b5f2a414322ac92d99f5b22d5ea0a955bf4a34270540736368#0#HLA_DPB1",
          "PG9d1cb76e4934c779d7824f69315593b95e7b5a0cc0a344cf9ef4aae0ce6c4488#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          296,
          297
        ]
      ],
      "score_gap": 1666.3766816518037,
      "distinct_support": [
        790.704656071112,
        787.9884065727429
      ],
      "selected_paths": [
        [
          "IPD:HLA-DPB2*03:01:01:02"
        ],
        [
          "IPD:HLA-DPB2*01:01:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          303,
          312
        ]
      ],
      "score_gap": 157.1807498652779,
      "distinct_support": [
        352.61789554341146,
        299.4973995937084
      ],
      "selected_paths": [
        [
          "PGf9c713287831d2e3f12264f540826a2dfbfae74b3d8393ee913974b30de86c8e#0#HLA_DQA1"
        ],
        [
          "PG491cfddb6b930b9142fecfda8231bf1922d22aa446ece6549df9fbf31daf81af#0#HLA_DQA1",
          "PGad7eb2080b0bc0e5b655bcf478cc0eead1f91df21d674174157c9dedec8e6ae6#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          335,
          338
        ]
      ],
      "score_gap": 92.32543580318452,
      "distinct_support": [
        115.84929306615848,
        75.13588457562778
      ],
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:03"
        ],
        [
          "IPD:HLA-DQA2*01:01:02:04"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          367,
          384
        ]
      ],
      "score_gap": 49.89849657539162,
      "distinct_support": [
        449.0693432078973,
        396.6099143096579
      ],
      "selected_paths": [
        [
          "PG1f80bbae340a69bef5b4fb6bacf5fa8fa434568b5b1ad551bcbe82b72c8c7c4a#0#HLA_DQB1",
          "PG9f0f03a5274c922eaf88fe6c8a53b9930756d83a548f587ea4d52807d49386f1#0#HLA_DQB1",
          "PGf6638d12514b2297ab579e805981d670f501027609baebf2ed8c3789b2a303e9#0#HLA_DQB1"
        ],
        [
          "PG65e6f5912da73f6a172e75ab6aeeb5887a206252cdb6d71b8bcd12d6505e29a5#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          399,
          401
        ]
      ],
      "score_gap": 19.679737060083426,
      "distinct_support": [
        38.0,
        29.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:01:01:02"
        ]
      ]
    },
    "DRA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          431,
          440
        ]
      ],
      "score_gap": 42.232377200823976,
      "distinct_support": [
        220.4018700402741,
        189.82631873070062
      ],
      "selected_paths": [
        [
          "IPD:HLA-DRA*01:01:01:05"
        ],
        [
          "IPD:HLA-DRA*01:01:01:03"
        ]
      ]
    },
    "DRB1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          463,
          470
        ]
      ],
      "score_gap": 1.5765388791041914
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          498,
          498
        ]
      ],
      "score_gap": 4.825246366584906
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          530,
          530
        ]
      ],
      "score_gap": 2.0745220383105334
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          534,
          535
        ]
      ],
      "score_gap": 2.772402487578802
    },
    "F": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          566,
          570
        ]
      ],
      "score_gap": 9.081260326231131
    },
    "G": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          598,
          610
        ]
      ],
      "score_gap": 31.67503282277903,
      "distinct_support": [
        112.97008493779641,
        69.03953891975738
      ],
      "selected_paths": [
        [
          "IPD:HLA-G*01:01:03:03"
        ],
        [
          "IPD:HLA-G*01:05:01N"
        ]
      ]
    },
    "H": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          630,
          631
        ]
      ],
      "score_gap": 138.39803456381196,
      "distinct_support": [
        204.30432367205918,
        190.9480501602825
      ],
      "selected_paths": [
        [
          "IPD:HLA-H*02:05:01:03"
        ],
        [
          "IPD:HLA-H*02:07:01:01"
        ]
      ]
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          662,
          663
        ]
      ],
      "score_gap": 64.46262742887484,
      "distinct_support": [
        153.21686261903653,
        139.7659065788556
      ],
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:04"
        ],
        [
          "IPD:HLA-J*01:01:01:10"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          694,
          695
        ]
      ],
      "score_gap": 214.4746847380011,
      "distinct_support": [
        153.6509009009009,
        62.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-K*01:01:01:01"
        ],
        [
          "IPD:HLA-K*01:01:01:03"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          701,
          704
        ]
      ],
      "score_gap": 110.28154087861185,
      "distinct_support": [
        211.00303058467983,
        136.74248167739682
      ],
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          707,
          708
        ]
      ],
      "score_gap": 8.421437008510111
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          739,
          741
        ]
      ],
      "score_gap": 6.316261720698094
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          771,
          772
        ]
      ],
      "score_gap": 1.8566916959243827
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          775,
          777
        ]
      ],
      "score_gap": 85.9471014313167,
      "distinct_support": [
        149.0,
        109.15227343163836
      ],
      "selected_paths": [
        [
          "IPD:HLA-P*01:01:01:01"
        ],
        [
          "IPD:HLA-P*02:01:01:02"
        ]
      ]
    },
    "R": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          780,
          780
        ]
      ],
      "score_gap": 10.395003300596727,
      "distinct_support": [
        134.0,
        134.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-R*01:01:01:01"
        ],
        [
          "IPD:HLA-R*01:01:01:01"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          782,
          784
        ]
      ],
      "score_gap": 27.271220232622,
      "distinct_support": [
        25.0,
        11.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-S*01:01:01:01"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          787,
          789
        ]
      ],
      "score_gap": 52.314498123305384,
      "distinct_support": [
        130.0,
        110.95471680422658
      ],
      "selected_paths": [
        [
          "IPD:HLA-T*03:01:01:01"
        ],
        [
          "IPD:HLA-T*01:01:01:01"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          797,
          799
        ]
      ],
      "score_gap": 8.509939511874109
    },
    "TAP2": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          813,
          825
        ]
      ],
      "score_gap": 4.158610811660765
    },
    "U": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          845,
          846
        ]
      ],
      "score_gap": 54.13987679537968,
      "distinct_support": [
        19.9009009009009,
        10.000000000000057
      ],
      "selected_paths": [
        [
          "IPD:HLA-U*01:05"
        ],
        [
          "IPD:HLA-U*01:04"
        ]
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          847,
          848
        ]
      ],
      "score_gap": 110.86634985313867,
      "distinct_support": [
        90.00295010088318,
        87.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:02"
        ],
        [
          "IPD:HLA-V*01:01:01:01"
        ]
      ]
    },
    "W": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          851,
          854
        ]
      ],
      "score_gap": 6.5509173716855
    },
    "Y": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          864,
          864
        ]
      ],
      "score_gap": 43.553931251721224,
      "distinct_support": [
        107.75610096959514,
        107.75610096959514
      ],
      "selected_paths": [
        [
          "IPD:HLA-Y*02:01"
        ],
        [
          "IPD:HLA-Y*02:01"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 2979,
      "evidence_groups": 1105,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 217.39645494899605
    },
    "B": {
      "observed_paths": 4817,
      "evidence_groups": 1473,
      "retained_groups": 34,
      "retained_paths": 34,
      "cutoff": 203.1773502949824
    },
    "C": {
      "observed_paths": 5039,
      "evidence_groups": 1913,
      "retained_groups": 32,
      "retained_paths": 43,
      "cutoff": 212.90598136225833
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 477.07110880090335
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 624.6035518243716
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 166,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 207.76929471519665
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 125,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 288.32178499748727
    },
    "DPA1": {
      "observed_paths": 735,
      "evidence_groups": 475,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 795.2809271161233
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 140.23087831770374
    },
    "DPB1": {
      "observed_paths": 1851,
      "evidence_groups": 1195,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 1085.5129942752578
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 25.0
    },
    "DQA1": {
      "observed_paths": 395,
      "evidence_groups": 271,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 259.6822564358706
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 76.82774106819237
    },
    "DQB1": {
      "observed_paths": 843,
      "evidence_groups": 430,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 386.1135401357628
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 150.98351042439526
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 122,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 288.7262829159855
    },
    "DRB1": {
      "observed_paths": 462,
      "evidence_groups": 195,
      "retained_groups": 35,
      "retained_paths": 43,
      "cutoff": 654.8819510854366
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 119,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 626.8095609309323
    },
    "DRB5": {
      "observed_paths": 60,
      "evidence_groups": 6,
      "retained_groups": 4,
      "retained_paths": 52,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 304,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 357.7695775805071
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 126,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 243.74788354700465
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 130,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 167.89223181754517
    },
    "H": {
      "observed_paths": 105,
      "evidence_groups": 82,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 37.96737497905349
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 34,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 60.84416067825836
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 32.009009009009006
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 89.97831806997539
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 214,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 70.65045530894214
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 92,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 97.78242647664621
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 10.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 105.84772656836164
    },
    "R": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 119.0
    },
    "S": {
      "observed_paths": 7,
      "evidence_groups": 6,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 2.0
    },
    "T": {
      "observed_paths": 9,
      "evidence_groups": 9,
      "retained_groups": 9,
      "retained_paths": 9,
      "cutoff": 15.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 213.00000591863648
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 83,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 243.84034802984576
    },
    "U": {
      "observed_paths": 4,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 1.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 74.0
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 13,
      "retained_paths": 13,
      "cutoff": 3.0
    },
    "Y": {
      "observed_paths": 3,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 1.0245783229033263
    }
  },
  "fit": {
    "converged": true,
    "iterations": 3,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            1
          ]
        ],
        "gene_fraction": 0.022209309438087913,
        "score_gap": 51.768975796265295
      },
      "B": {
        "pairs": [
          [
            32,
            33
          ]
        ],
        "gene_fraction": 0.023710705419966272,
        "score_gap": 28.14185429000645
      },
      "C": {
        "pairs": [
          [
            66,
            67
          ]
        ],
        "gene_fraction": 0.027805047864930706,
        "score_gap": 179.87181310469168
      },
      "DMA": {
        "pairs": [
          [
            98,
            99
          ]
        ],
        "gene_fraction": 0.027875224739919015,
        "score_gap": 7.624222172918962
      },
      "DMB": {
        "pairs": [
          [
            130,
            132
          ]
        ],
        "gene_fraction": 0.03671032724701336,
        "score_gap": 16.634877247342956
      },
      "DOA": {
        "pairs": [
          [
            162,
            171
          ]
        ],
        "gene_fraction": 0.0204103789729653,
        "score_gap": 27.692245883197756
      },
      "DOB": {
        "pairs": [
          [
            194,
            209
          ]
        ],
        "gene_fraction": 0.022847892983375816,
        "score_gap": 17.95821676538617
      },
      "DPA1": {
        "pairs": [
          [
            226,
            243
          ]
        ],
        "gene_fraction": 0.051783853756685,
        "score_gap": 1.6971618883981137
      },
      "DPA2": {
        "pairs": [
          [
            258,
            259
          ]
        ],
        "gene_fraction": 0.03869041743488394,
        "score_gap": 125.2076702695922
      },
      "DPB1": {
        "pairs": [
          [
            264,
            265
          ]
        ],
        "gene_fraction": 0.06244766533226652,
        "score_gap": 14.555336073986837
      },
      "DPB2": {
        "pairs": [
          [
            296,
            297
          ]
        ],
        "gene_fraction": 0.09779214847040792,
        "score_gap": 1666.3766816518037
      },
      "DQA1": {
        "pairs": [
          [
            303,
            312
          ]
        ],
        "gene_fraction": 0.033247584838566456,
        "score_gap": 157.1807498652779
      },
      "DQA2": {
        "pairs": [
          [
            335,
            338
          ]
        ],
        "gene_fraction": 0.02924595047130077,
        "score_gap": 92.32543580318452
      },
      "DQB1": {
        "pairs": [
          [
            367,
            384
          ]
        ],
        "gene_fraction": 0.04316568645418919,
        "score_gap": 49.89849657539162
      },
      "DQB2": {
        "pairs": [
          [
            399,
            401
          ]
        ],
        "gene_fraction": 0.04300664397061806,
        "score_gap": 19.679737060083426
      },
      "DRA": {
        "pairs": [
          [
            431,
            440
          ]
        ],
        "gene_fraction": 0.027214449340229995,
        "score_gap": 42.232377200823976
      },
      "DRB1": {
        "pairs": [
          [
            463,
            470
          ]
        ],
        "gene_fraction": 0.10370152764988176,
        "score_gap": 1.5765388791041914
      },
      "DRB4": {
        "pairs": [
          [
            498,
            498
          ]
        ],
        "gene_fraction": 0.035085581381057766,
        "score_gap": 4.825246366584906
      },
      "DRB5": {
        "pairs": [
          [
            530,
            530
          ]
        ],
        "gene_fraction": 0.0006083183978797638,
        "score_gap": 2.0745220383105334
      },
      "E": {
        "pairs": [
          [
            534,
            535
          ]
        ],
        "gene_fraction": 0.021476798986416887,
        "score_gap": 2.772402487578802
      },
      "F": {
        "pairs": [
          [
            566,
            570
          ]
        ],
        "gene_fraction": 0.01919200174643221,
        "score_gap": 9.081260326231131
      },
      "G": {
        "pairs": [
          [
            598,
            610
          ]
        ],
        "gene_fraction": 0.015383688253295901,
        "score_gap": 31.67503282277903
      },
      "H": {
        "pairs": [
          [
            630,
            631
          ]
        ],
        "gene_fraction": 0.02032456271990746,
        "score_gap": 138.39803456381196
      },
      "J": {
        "pairs": [
          [
            662,
            663
          ]
        ],
        "gene_fraction": 0.02051199247884279,
        "score_gap": 64.46262742887484
      },
      "K": {
        "pairs": [
          [
            694,
            695
          ]
        ],
        "gene_fraction": 0.012336806630521842,
        "score_gap": 214.4746847380011
      },
      "L": {
        "pairs": [
          [
            701,
            704
          ]
        ],
        "gene_fraction": 0.019597838139771267,
        "score_gap": 110.28154087861185
      },
      "MICA": {
        "pairs": [
          [
            707,
            708
          ]
        ],
        "gene_fraction": 0.00908486450625581,
        "score_gap": 8.421437008510111
      },
      "MICB": {
        "pairs": [
          [
            739,
            741
          ]
        ],
        "gene_fraction": 0.00832591854525539,
        "score_gap": 6.316261720698094
      },
      "N": {
        "pairs": [
          [
            771,
            772
          ]
        ],
        "gene_fraction": 0.001471249717316619,
        "score_gap": 1.8566916959243827
      },
      "P": {
        "pairs": [
          [
            775,
            777
          ]
        ],
        "gene_fraction": 0.013301466592859603,
        "score_gap": 85.9471014313167
      },
      "R": {
        "pairs": [
          [
            780,
            780
          ]
        ],
        "gene_fraction": 0.006803055418511517,
        "score_gap": 10.395003300596727
      },
      "S": {
        "pairs": [
          [
            782,
            784
          ]
        ],
        "gene_fraction": 0.0018259551882433536,
        "score_gap": 27.271220232622
      },
      "T": {
        "pairs": [
          [
            787,
            789
          ]
        ],
        "gene_fraction": 0.012235144066576286,
        "score_gap": 52.314498123305384
      },
      "TAP1": {
        "pairs": [
          [
            797,
            799
          ]
        ],
        "gene_fraction": 0.01985247110005764,
        "score_gap": 8.509939511874109
      },
      "TAP2": {
        "pairs": [
          [
            813,
            825
          ]
        ],
        "gene_fraction": 0.02203533288400187,
        "score_gap": 4.158610811660765
      },
      "U": {
        "pairs": [
          [
            845,
            846
          ]
        ],
        "gene_fraction": 0.0017753267329583351,
        "score_gap": 54.13987679537968
      },
      "V": {
        "pairs": [
          [
            847,
            848
          ]
        ],
        "gene_fraction": 0.009087010568010567,
        "score_gap": 110.86634985313867
      },
      "W": {
        "pairs": [
          [
            851,
            854
          ]
        ],
        "gene_fraction": 0.012336938923328038,
        "score_gap": 6.5509173716855
      },
      "Y": {
        "pairs": [
          [
            864,
            864
          ]
        ],
        "gene_fraction": 0.005482862637211001,
        "score_gap": 43.553931251721224
      }
    },
    "unassigned_fragments": 515,
    "objective_trace": [
      -95656.51953440686,
      -95656.51561890726,
      -95656.51561890513
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}