{
  "decisions": {
    "A": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          0,
          2
        ]
      ],
      "score_gap": 9.42785655046464
    },
    "B": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          33,
          33
        ]
      ],
      "score_gap": 6.93111774706631
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          65,
          65
        ]
      ],
      "score_gap": 54.062722690199735,
      "distinct_support": [
        611.0542709228185,
        611.0542709228185
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 611.9772178676724,
        "score_gap": 53.28747039841721,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG5145e058161179e3fb6e7a668521269dcad257c13f23b1335f3f6c07f2c77a63#0#HLA_C",
          "PG883ad028f7672efc2b60ed93860e20198d31aaa874198ed5336da903782daa8f#0#HLA_C",
          "PG9a92094048225b3c0ea345ca242b8bd83d44a2044c984faead2c2f3cda47cb2e#0#HLA_C"
        ],
        [
          "PG5145e058161179e3fb6e7a668521269dcad257c13f23b1335f3f6c07f2c77a63#0#HLA_C",
          "PG883ad028f7672efc2b60ed93860e20198d31aaa874198ed5336da903782daa8f#0#HLA_C",
          "PG9a92094048225b3c0ea345ca242b8bd83d44a2044c984faead2c2f3cda47cb2e#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          99,
          100
        ]
      ],
      "score_gap": 96.51988672635343,
      "distinct_support": [
        100.44942227944955,
        95.67745559909572
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 582.9718727154329,
        "score_gap": 31.34790298236237,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:03"
        ],
        [
          "IPD:HLA-DMA*01:01:01:07"
        ]
      ]
    },
    "DMB": {
      "reason": "tied_sequence_pairs",
      "pairs": [
        [
          129,
          134
        ],
        [
          130,
          132
        ]
      ],
      "score_gap": 7.62430756741378
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          162,
          168
        ]
      ],
      "score_gap": 64.67956094404508,
      "distinct_support": [
        158.99052612911612,
        144.94121502279793
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 430.9643042514617,
        "score_gap": 23.52955546236157,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:02:08"
        ],
        [
          "IPD:HLA-DOA*01:01:01:01"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          196,
          207
        ]
      ],
      "score_gap": 94.47244354760915,
      "distinct_support": [
        173.80445633261394,
        132.73282718682498
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 461.96510650787394,
        "score_gap": 40.58251284217934,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:05:01"
        ],
        [
          "IPD:HLA-DOB*01:01:01:28"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          228,
          232
        ]
      ],
      "score_gap": 19.764797315132455,
      "distinct_support": [
        121.7940607870333,
        83.3364092850305
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1167.9738039992158,
        "score_gap": 23.3493373839581,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGade199bb57ed516045148db21f31aabd3a0768bb88f15db8d2164002d828a79f#0#HLA_DPA1"
        ],
        [
          "IPD:HLA-DPA1*PGb2d728c6fe3c"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          260,
          261
        ]
      ],
      "score_gap": 440.59086944526643,
      "distinct_support": [
        301.0711,
        292.00449060404435
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 746.9241955099433,
        "score_gap": 166.32403273859688,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*01:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:02"
        ]
      ]
    },
    "DPB1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          266,
          271
        ]
      ],
      "score_gap": 2.772531478709425
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          299,
          299
        ]
      ],
      "score_gap": 206.53416709507292,
      "distinct_support": [
        2152.6012759457067,
        2152.6012759457067
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2155.9480662868646,
        "score_gap": 246.63166859496258,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*03:01:01:01"
        ],
        [
          "IPD:HLA-DPB2*03:01:01:01"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          307,
          308
        ]
      ],
      "score_gap": 57.06723215155944,
      "distinct_support": [
        280.9717418259857,
        274.0307908414444
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 839.9653263778637,
        "score_gap": 48.224840797101024,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG1d66764fee06a5ddd00e1152f0ec94a8081f25a260f2d91c1d7134bf988f3cd7#0#HLA_DQA1",
          "PG347651ca4c5410091f6c094131c96650f7557ebe9b5bcdba1244f0dc54a29286#0#HLA_DQA1"
        ],
        [
          "PGcd1e7ea710135123afa604f9be656c7f2e700f2a92d670caea9f8c369684b3be#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          338,
          339
        ]
      ],
      "score_gap": 39.844797481637215,
      "distinct_support": [
        70.09995039415176,
        42.02476064126766
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 572.9735520083996,
        "score_gap": 76.23297625485984,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:03"
        ],
        [
          "IPD:HLA-DQA2*01:01:02:01"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          370,
          372
        ]
      ],
      "score_gap": 105.41174216086802,
      "distinct_support": [
        514.9093064110391,
        500.8510282581834
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1013.9462461901421,
        "score_gap": 121.57617592289205,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGa7cbf18c9ac92ff3a8478e8df6c52da543b074ac92cdc78c751473128bcb249d#0#HLA_DQB1",
          "PGf2c94fd16d7984735030d9c6fd4dd47824907857832a567b3875ee534c71f430#0#HLA_DQB1"
        ],
        [
          "PG7e865e61e7d1e26283816a9b79e1d3472dc4f69060815f8446b5981d40374484#0#HLA_DQB1",
          "PG8d2756e8481eb14237edb7fc1bbc1883751ae87102da75fd3d6612fd7d8999d3#0#HLA_DQB1",
          "PGb999f7376011d6e73ba4f003e9732463c441686975e11ed05c7757f379f23bd6#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          402,
          410
        ]
      ],
      "score_gap": 12.476186065585352,
      "distinct_support": [
        91.01896209539368,
        43.19062078279042
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 823.9756707873945,
        "score_gap": 54.24769084786787,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:03"
        ]
      ]
    },
    "DRA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          434,
          435
        ]
      ],
      "score_gap": 4.295996186308912
    },
    "DRB1": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          466,
          471
        ]
      ],
      "score_gap": 36.63540660990111,
      "distinct_support": [
        141.50280989566576,
        36.09938858328754
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1593.8257768010358,
        "score_gap": -13.859453450264198,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          499,
          500
        ]
      ],
      "score_gap": 3.184331123382435
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          501,
          509
        ]
      ],
      "score_gap": 0.040225088960141875
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          533,
          536
        ]
      ],
      "score_gap": 4.158609599762713
    },
    "F": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          565,
          565
        ]
      ],
      "score_gap": 3.465446794303716
    },
    "G": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          598,
          602
        ]
      ],
      "score_gap": 4.158479450052255
    },
    "H": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          629,
          629
        ]
      ],
      "score_gap": 3.4651277469092747
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          661,
          661
        ]
      ],
      "score_gap": 12.47557612755918,
      "distinct_support": [
        348.49517607526053,
        348.49517607526053
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 350.9483205158027,
        "score_gap": 12.296810119675243,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:02"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          693,
          693
        ]
      ],
      "score_gap": 100.45556411301368,
      "distinct_support": [
        173.92683959127896,
        173.92683959127896
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 173.97906900069876,
        "score_gap": 104.51654939304188,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:01:01:02"
        ],
        [
          "IPD:HLA-K*01:01:01:02"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          698,
          699
        ]
      ],
      "score_gap": 157.26389365318755,
      "distinct_support": [
        201.98609123551051,
        191.05064753099998
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 435.67925241897336,
        "score_gap": 70.58874055076137,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:02"
        ]
      ]
    },
    "MICA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          704,
          704
        ]
      ],
      "score_gap": 14.553907184847048,
      "distinct_support": [
        199.57158338427493,
        199.57158338427493
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 201.17628800546143,
        "score_gap": 14.345641934413205,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:MICA*017:01:01"
        ],
        [
          "IPD:MICA*017:01:01"
        ]
      ]
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          736,
          737
        ]
      ],
      "score_gap": 6.753269543740316
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          768,
          770
        ]
      ],
      "score_gap": 3.5895318790571764
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          772,
          773
        ]
      ],
      "score_gap": 161.03132076076872,
      "distinct_support": [
        156.0,
        138.05736160214983
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 296.9583656751869,
        "score_gap": 71.95187006408855,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:02"
        ],
        [
          "IPD:HLA-P*01:01:01:01"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          777,
          777
        ]
      ],
      "score_gap": 16.626235542600625,
      "distinct_support": [
        54.0,
        54.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 53.97907818958611,
        "score_gap": 16.39037163075602,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:01"
        ],
        [
          "IPD:HLA-S*01:02:01:01"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          781,
          781
        ]
      ],
      "score_gap": 13.166309778476716,
      "distinct_support": [
        113.96214840940549,
        113.96214840940549
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 113.97907114012376,
        "score_gap": 12.978357858454455,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*01:01:01:01"
        ],
        [
          "IPD:HLA-T*01:01:01:01"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          788,
          789
        ]
      ],
      "score_gap": 4.851659505817224
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          805,
          818
        ]
      ],
      "score_gap": 26.999949718578137,
      "distinct_support": [
        137.98397516035976,
        83.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 476.96937974175347,
        "score_gap": 16.041261197188987,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*01:05:01:03"
        ],
        [
          "IPD:TAP2*01:01:03:11"
        ]
      ]
    },
    "U": {
      "reason": "insufficient_distinct_copy_support",
      "pairs": [
        [
          838,
          839
        ]
      ],
      "score_gap": 11.185183510839124,
      "distinct_support": [
        8.0,
        3.0
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          840,
          842
        ]
      ],
      "score_gap": 92.48785479436629,
      "distinct_support": [
        110.0,
        89.97534189393497
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 199.95815108986005,
        "score_gap": 42.449630373109585,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:04"
        ],
        [
          "IPD:HLA-V*01:01:01:02"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          846,
          848
        ]
      ],
      "score_gap": 70.67885156199918,
      "distinct_support": [
        89.5920397289695,
        73.16350797403993
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 305.9674722159424,
        "score_gap": 38.15136234823564,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*01:01:01:06"
        ],
        [
          "IPD:HLA-W*01:01:01:07"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 2917,
      "evidence_groups": 1496,
      "retained_groups": 33,
      "retained_paths": 45,
      "cutoff": 177.6889314453639
    },
    "B": {
      "observed_paths": 5329,
      "evidence_groups": 611,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 369.5406240866366
    },
    "C": {
      "observed_paths": 4479,
      "evidence_groups": 1435,
      "retained_groups": 32,
      "retained_paths": 39,
      "cutoff": 340.287101718082
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 441.50375434251487
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 163,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 623.0785429805293
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 165,
      "retained_groups": 34,
      "retained_paths": 34,
      "cutoff": 246.72788617476252
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 125,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 259.26169025486115
    },
    "DPA1": {
      "observed_paths": 719,
      "evidence_groups": 474,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 926.9949648844017
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 344.75921440725756
    },
    "DPB1": {
      "observed_paths": 1857,
      "evidence_groups": 1502,
      "retained_groups": 33,
      "retained_paths": 42,
      "cutoff": 757.9220368742835
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 51.25031190790776
    },
    "DQA1": {
      "observed_paths": 309,
      "evidence_groups": 256,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 388.85187340214054
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 87.78835517703583
    },
    "DQB1": {
      "observed_paths": 682,
      "evidence_groups": 243,
      "retained_groups": 32,
      "retained_paths": 40,
      "cutoff": 406.95507314041777
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 157.95324961603347
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 114,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 405.1810130132486
    },
    "DRB1": {
      "observed_paths": 476,
      "evidence_groups": 180,
      "retained_groups": 33,
      "retained_paths": 34,
      "cutoff": 1190.4642011535657
    },
    "DRB4": {
      "observed_paths": 104,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 104,
      "cutoff": 1.0
    },
    "DRB5": {
      "observed_paths": 73,
      "evidence_groups": 67,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 1291.512678278974
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 302,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 391.46028157654706
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 120,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 295.85367121978794
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 131,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 221.6661542261432
    },
    "H": {
      "observed_paths": 105,
      "evidence_groups": 69,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 22.971996400878666
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 30.855094560582025
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 1.0
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 84.93568946519423
    },
    "MICA": {
      "observed_paths": 365,
      "evidence_groups": 127,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 74.72176285702443
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 78,
      "retained_groups": 32,
      "retained_paths": 42,
      "cutoff": 66.7556850913025
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 9.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 87.94263839785017
    },
    "S": {
      "observed_paths": 5,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 5,
      "cutoff": 8.000000000285402
    },
    "T": {
      "observed_paths": 9,
      "evidence_groups": 8,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 1.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 243.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 83,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 296.8985274314283
    },
    "U": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 1.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 72.97534189393497
    },
    "W": {
      "observed_paths": 12,
      "evidence_groups": 12,
      "retained_groups": 12,
      "retained_paths": 12,
      "cutoff": 8.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 4,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            2
          ]
        ],
        "gene_fraction": 0.024857735637073955,
        "score_gap": 9.42785655046464
      },
      "B": {
        "pairs": [
          [
            33,
            33
          ]
        ],
        "gene_fraction": 0.02824244618578763,
        "score_gap": 6.93111774706631
      },
      "C": {
        "pairs": [
          [
            65,
            65
          ]
        ],
        "gene_fraction": 0.029728635783324155,
        "score_gap": 54.062722690199735
      },
      "DMA": {
        "pairs": [
          [
            99,
            100
          ]
        ],
        "gene_fraction": 0.02786431295293102,
        "score_gap": 96.51988672635343
      },
      "DMB": {
        "pairs": [
          [
            129,
            134
          ],
          [
            130,
            132
          ]
        ],
        "gene_fraction": 0.03532075126487806,
        "score_gap": 7.62430756741378
      },
      "DOA": {
        "pairs": [
          [
            162,
            168
          ]
        ],
        "gene_fraction": 0.02059880554588994,
        "score_gap": 64.67956094404508
      },
      "DOB": {
        "pairs": [
          [
            196,
            207
          ]
        ],
        "gene_fraction": 0.022080551229271245,
        "score_gap": 94.47244354760915
      },
      "DPA1": {
        "pairs": [
          [
            228,
            232
          ]
        ],
        "gene_fraction": 0.05639920636290292,
        "score_gap": 19.764797315132455
      },
      "DPA2": {
        "pairs": [
          [
            260,
            261
          ]
        ],
        "gene_fraction": 0.03570074391026261,
        "score_gap": 440.59086944526643
      },
      "DPB1": {
        "pairs": [
          [
            266,
            271
          ]
        ],
        "gene_fraction": 0.06987546445956803,
        "score_gap": 2.772531478709425
      },
      "DPB2": {
        "pairs": [
          [
            299,
            299
          ]
        ],
        "gene_fraction": 0.10304787322059453,
        "score_gap": 206.53416709507292
      },
      "DQA1": {
        "pairs": [
          [
            307,
            308
          ]
        ],
        "gene_fraction": 0.04033901516259854,
        "score_gap": 57.06723215155944
      },
      "DQA2": {
        "pairs": [
          [
            338,
            339
          ]
        ],
        "gene_fraction": 0.027386423109200867,
        "score_gap": 39.844797481637215
      },
      "DQB1": {
        "pairs": [
          [
            370,
            372
          ]
        ],
        "gene_fraction": 0.048654779963034495,
        "score_gap": 105.41174216086802
      },
      "DQB2": {
        "pairs": [
          [
            402,
            410
          ]
        ],
        "gene_fraction": 0.03938357411637855,
        "score_gap": 12.476186065585352
      },
      "DRA": {
        "pairs": [
          [
            434,
            435
          ]
        ],
        "gene_fraction": 0.026717478850656014,
        "score_gap": 4.295996186308912
      },
      "DRB1": {
        "pairs": [
          [
            466,
            471
          ]
        ],
        "gene_fraction": 0.07622790377368874,
        "score_gap": 36.63540660990111
      },
      "DRB4": {
        "pairs": [
          [
            499,
            500
          ]
        ],
        "gene_fraction": 9.359403759885883e-05,
        "score_gap": 3.184331123382435
      },
      "DRB5": {
        "pairs": [
          [
            501,
            509
          ]
        ],
        "gene_fraction": 0.07250263679626191,
        "score_gap": 0.040225088960141875
      },
      "E": {
        "pairs": [
          [
            533,
            536
          ]
        ],
        "gene_fraction": 0.021937680686714423,
        "score_gap": 4.158609599762713
      },
      "F": {
        "pairs": [
          [
            565,
            565
          ]
        ],
        "gene_fraction": 0.017301517526394507,
        "score_gap": 3.465446794303716
      },
      "G": {
        "pairs": [
          [
            598,
            602
          ]
        ],
        "gene_fraction": 0.014863492419447679,
        "score_gap": 4.158479450052255
      },
      "H": {
        "pairs": [
          [
            629,
            629
          ]
        ],
        "gene_fraction": 0.008220084373755062,
        "score_gap": 3.4651277469092747
      },
      "J": {
        "pairs": [
          [
            661,
            661
          ]
        ],
        "gene_fraction": 0.016774280698421625,
        "score_gap": 12.47557612755918
      },
      "K": {
        "pairs": [
          [
            693,
            693
          ]
        ],
        "gene_fraction": 0.008315679456307356,
        "score_gap": 100.45556411301368
      },
      "L": {
        "pairs": [
          [
            698,
            699
          ]
        ],
        "gene_fraction": 0.020824165964961602,
        "score_gap": 157.26389365318755
      },
      "MICA": {
        "pairs": [
          [
            704,
            704
          ]
        ],
        "gene_fraction": 0.009615625221231027,
        "score_gap": 14.553907184847048
      },
      "MICB": {
        "pairs": [
          [
            736,
            737
          ]
        ],
        "gene_fraction": 0.007758707731042153,
        "score_gap": 6.753269543740316
      },
      "N": {
        "pairs": [
          [
            768,
            770
          ]
        ],
        "gene_fraction": 0.0007632500573915676,
        "score_gap": 3.5895318790571764
      },
      "P": {
        "pairs": [
          [
            772,
            773
          ]
        ],
        "gene_fraction": 0.014193722238877934,
        "score_gap": 161.03132076076872
      },
      "S": {
        "pairs": [
          [
            777,
            777
          ]
        ],
        "gene_fraction": 0.002580038587569806,
        "score_gap": 16.626235542600625
      },
      "T": {
        "pairs": [
          [
            781,
            781
          ]
        ],
        "gene_fraction": 0.0054478589045958495,
        "score_gap": 13.166309778476716
      },
      "TAP1": {
        "pairs": [
          [
            788,
            789
          ]
        ],
        "gene_fraction": 0.018878753484704042,
        "score_gap": 4.851659505817224
      },
      "TAP2": {
        "pairs": [
          [
            805,
            818
          ]
        ],
        "gene_fraction": 0.02279771064077482,
        "score_gap": 26.999949718578137
      },
      "U": {
        "pairs": [
          [
            838,
            839
          ]
        ],
        "gene_fraction": 0.0005237671179913889,
        "score_gap": 11.185183510839124
      },
      "V": {
        "pairs": [
          [
            840,
            842
          ]
        ],
        "gene_fraction": 0.009557401925079404,
        "score_gap": 92.48785479436629
      },
      "W": {
        "pairs": [
          [
            846,
            848
          ]
        ],
        "gene_fraction": 0.01462433060283761,
        "score_gap": 70.67885156199918
      }
    },
    "unassigned_fragments": 2127,
    "objective_trace": [
      -105792.23762388167,
      -105792.23255113527,
      -105792.23255082381,
      -105792.23255082373
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}