{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          1
        ]
      ],
      "score_gap": 175.16997240035562,
      "distinct_support": [
        288.1687791208053,
        280.7453083390091
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 568.698917637701,
        "score_gap": 94.12025055382003,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG47c4882365b65b5b5697af9907f7e9f5617efd38eb5fc69d5658a7a147a6d9cd#0#HLA_A",
          "PGbb3e28e581b2f7f638fc040a0784c8a8001567d8901df15ec782816cf0f4e770#0#HLA_A",
          "PGdc7e6be4a32c36bf9aab24bfe8bc1f1afc6e0bd2f2097fe1ee919d2caae5d907#0#HLA_A"
        ],
        [
          "PG1795f8c5a377d8c1bcc6582831869b1ac05bdb1418febc8ac8dd34e62c282c66#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          32,
          33
        ]
      ],
      "score_gap": 38.125984232494375,
      "distinct_support": [
        295.41028947621805,
        281.18189306703925
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 600.5935746470309,
        "score_gap": 88.73381333395821,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG45a732c89495e9e9eaaa1c3b95fb82d24b518f4fd5f8ba078d34434dbc4da1bc#0#HLA_B"
        ],
        [
          "PGc13a7f8a861d46335d6aa72fa883b91001d658a425885ab3a98d3bc11e30ea0b#0#HLA_B",
          "PGd4d88798b19360cd780a16fc80d9eb3d58900898808b6711af0eaf0aa6663394#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          65,
          66
        ]
      ],
      "score_gap": 28.839939973608125,
      "distinct_support": [
        326.51852905039425,
        311.51554018056925
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 649.8877679662032,
        "score_gap": 129.41647023460723,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG1fa87a31f905e3b4fbd9eea24374180a7188a0b1a8f4aea5e1fa2e1e12f912c2#0#HLA_C",
          "PGc359269849597ffa2afaa702362088542e010bd5c56c41cc475b4e876b2ee84f#0#HLA_C"
        ],
        [
          "PGa1b45cef91f3bffc23b49f68c1c14df6ae80f6a0b8c52a9fe052ecaefa1cd1b2#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          97,
          103
        ]
      ],
      "score_gap": 24.98080212736386,
      "distinct_support": [
        100.5272697782585,
        75.69079905656284
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 535.9707658894724,
        "score_gap": 13.991826928574511,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:03"
        ],
        [
          "IPD:HLA-DMA*01:01:01:01"
        ]
      ]
    },
    "DMB": {
      "reason": "tied_sequence_pairs",
      "pairs": [
        [
          133,
          139
        ],
        [
          135,
          137
        ]
      ],
      "score_gap": 4.851838151065749
    },
    "DOA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          161,
          162
        ]
      ],
      "score_gap": 8.317173803996411
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          193,
          207
        ]
      ],
      "score_gap": 20.735236241365783,
      "distinct_support": [
        138.99368952831557,
        110.7552744530235
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 460.9662855945745,
        "score_gap": 11.764806294844021,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:41"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          225,
          228
        ]
      ],
      "score_gap": 54.94593842657923,
      "distinct_support": [
        611.8121592324885,
        587.4563658490854
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1248.1164600901864,
        "score_gap": 28.66786565545874,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGa1096ae20182356cca245fac310c9718e3b571d68419762f44a6efb3f389f7bf#0#HLA_DPA1"
        ],
        [
          "PG5bbd8af323cca5bcd99035c40a3d4fcda565ba7cc0237491ecfb9febea5e9bf3#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          257,
          259
        ]
      ],
      "score_gap": 62.374865225632675,
      "distinct_support": [
        129.0,
        66.009009009009
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 795.9668072228435,
        "score_gap": 33.816197781397705,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*01:01:01:02"
        ],
        [
          "IPD:HLA-DPA2*01:01:01:01"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          263,
          266
        ]
      ],
      "score_gap": 158.67736700589012,
      "distinct_support": [
        624.4485066847187,
        571.4597137925971
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1405.6012446363952,
        "score_gap": 70.59334240430508,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGde8e9ddc0c86431f59a06903d143b534a2afed6fc7916cb2d174b70b4addc9eb#0#HLA_DPB1"
        ],
        [
          "PG602ea6e2a38b2eeb9002dc45dd7746ad4b944813b02d46532d073c9fc405ec4e#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          296,
          298
        ]
      ],
      "score_gap": 1718.903529923642,
      "distinct_support": [
        887.8107624039637,
        700.5989928782855
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1974.959537856159,
        "score_gap": 714.0787521975519,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*03:01:01:02"
        ],
        [
          "IPD:HLA-DPB2*01:01:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          303,
          306
        ]
      ],
      "score_gap": 78.57013668172294,
      "distinct_support": [
        407.597060506101,
        385.90791202526
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 798.8169614750839,
        "score_gap": 31.3740834649916,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG491cfddb6b930b9142fecfda8231bf1922d22aa446ece6549df9fbf31daf81af#0#HLA_DQA1",
          "PGad7eb2080b0bc0e5b655bcf478cc0eead1f91df21d674174157c9dedec8e6ae6#0#HLA_DQA1"
        ],
        [
          "PG90a466cc495cde556081283de1e8553162b1846c245f3495d3bf95d052586e30#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          335,
          336
        ]
      ],
      "score_gap": 54.38478518892953,
      "distinct_support": [
        66.17951251326403,
        50.011523779216475
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 642.9742085981305,
        "score_gap": 60.463204021214395,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:03"
        ],
        [
          "IPD:HLA-DQA2*01:01:02:01"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          367,
          369
        ]
      ],
      "score_gap": 29.90486494716606,
      "distinct_support": [
        477.6464568312729,
        450.1498693042205
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 925.1312088923944,
        "score_gap": 91.4130888300366,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG0b560e71ff1efab0a814c9edada1aff28fd66a45f0ee0842e5fbea5412da5094#0#HLA_DQB1",
          "PG0e4c9b194d0db7852ac2fc077ab6be0892f66de449b671ec3fbc353a13b4664d#0#HLA_DQB1",
          "PG7a0290e9902eef02fa068449c25aeac93a066ce2ca350f184db64ef1926f703b#0#HLA_DQB1"
        ],
        [
          "PG8ebc981c546268e1b19b608b25afcba00da76a0e79596229eba9555916a6af01#0#HLA_DQB1",
          "PG95ed2f6b4f6e2859f57e965284076a52a838bbc888c44bc5cfc4622130f50e0f#0#HLA_DQB1",
          "PG9f0f03a5274c922eaf88fe6c8a53b9930756d83a548f587ea4d52807d49386f1#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          400,
          401
        ]
      ],
      "score_gap": 0.9492144741816446
    },
    "DRA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          431,
          431
        ]
      ],
      "score_gap": 8.31730521749705
    },
    "DRB1": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          463,
          469
        ]
      ],
      "score_gap": 10.6323818177043,
      "distinct_support": [
        1367.2980419865573,
        987.647378984629
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2385.261677639689,
        "score_gap": 3.921898651519996,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRB4": {
      "reason": "tied_sequence_pairs",
      "pairs": [
        [
          495,
          499
        ],
        [
          496,
          497
        ]
      ],
      "score_gap": 26.339028675371082
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          527,
          527
        ]
      ],
      "score_gap": null
    },
    "E": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          528,
          529
        ]
      ],
      "score_gap": 11.78237862874812,
      "distinct_support": [
        23.0,
        12.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 423.97627331346035,
        "score_gap": 11.612769110955053,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-E*01:03:02:01"
        ],
        [
          "IPD:HLA-E*01:03:01:01"
        ]
      ]
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          560,
          562
        ]
      ],
      "score_gap": 313.73543844142114,
      "distinct_support": [
        144.0,
        119.85969346078522
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 449.96534681773994,
        "score_gap": 127.69192963618326,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-F*01:01:09"
        ],
        [
          "IPD:HLA-F*01:01:05"
        ]
      ]
    },
    "G": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          592,
          593
        ]
      ],
      "score_gap": 16.411663181774202,
      "distinct_support": [
        54.908780696042896,
        39.983660319929896
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 285.9709001985617,
        "score_gap": 9.892184103282375,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "H": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          624,
          624
        ]
      ],
      "score_gap": 1.3579983016534243
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          656,
          657
        ]
      ],
      "score_gap": 33.81778872194991,
      "distinct_support": [
        185.91975465324808,
        164.5965601834915
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 428.9602187822519,
        "score_gap": 17.913181745822072,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:08"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          688,
          688
        ]
      ],
      "score_gap": 130.8414696920372,
      "distinct_support": [
        205.9812550917001,
        205.9812550917001
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 205.97817933694392,
        "score_gap": 131.15990176310746,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:01:01:03"
        ],
        [
          "IPD:HLA-K*01:01:01:03"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          693,
          694
        ]
      ],
      "score_gap": 166.8911409637658,
      "distinct_support": [
        216.00621999662562,
        209.08519932584335
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 463.9581944909297,
        "score_gap": 70.58888085679234,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          699,
          703
        ]
      ],
      "score_gap": 0.6928665605082642
    },
    "MICB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          731,
          732
        ]
      ],
      "score_gap": 10.395430912263691,
      "distinct_support": [
        50.097222172433504,
        49.792205999509946
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 193.4111941192413,
        "score_gap": 10.246738773158853,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:MICB*002:01:28"
        ],
        [
          "IPD:MICB*005:02:43"
        ]
      ]
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          763,
          763
        ]
      ],
      "score_gap": 2.0657283469481627
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          766,
          767
        ]
      ],
      "score_gap": 375.19302076999156,
      "distinct_support": [
        158.01923387974094,
        158.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 319.95663477039216,
        "score_gap": 166.0667179680766,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*01:01:01:02"
        ],
        [
          "IPD:HLA-P*02:01:01:02"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          771,
          772
        ]
      ],
      "score_gap": 57.80953742857673,
      "distinct_support": [
        30.0,
        29.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 59.95672645533321,
        "score_gap": 31.352967575018738,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:01:01:01"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "T": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          778,
          780
        ]
      ],
      "score_gap": 13.792974065974704,
      "distinct_support": [
        59.699676921998105,
        10.00018996106871
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 121.96574968982475,
        "score_gap": -1.4886149413910914,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "TAP1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          784,
          785
        ]
      ],
      "score_gap": 25.111534336960176,
      "distinct_support": [
        36.0,
        29.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 386.9745168796425,
        "score_gap": 14.674645560965146,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP1*01:01:01:05"
        ],
        [
          "IPD:TAP1*02:01:01"
        ]
      ]
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          802,
          805
        ]
      ],
      "score_gap": 37.4267088995548,
      "distinct_support": [
        144.0,
        121.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 449.9653281730093,
        "score_gap": 21.329071195651295,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*02:01:03:01"
        ],
        [
          "IPD:TAP2*01:04:01:02"
        ]
      ]
    },
    "U": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          833,
          833
        ]
      ],
      "score_gap": null
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          834,
          835
        ]
      ],
      "score_gap": 111.68855697970139,
      "distinct_support": [
        120.0,
        114.01380010711148
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 234.95645488968802,
        "score_gap": 50.97618581272067,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:03"
        ],
        [
          "IPD:HLA-V*01:01:01:04"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          838,
          840
        ]
      ],
      "score_gap": 40.3562781613291,
      "distinct_support": [
        98.58772782559448,
        61.898125161646
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 296.9662773553405,
        "score_gap": 36.39498789903007,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*01:01:01:04"
        ],
        [
          "IPD:HLA-W*05:02"
        ]
      ]
    },
    "Y": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          849,
          849
        ]
      ],
      "score_gap": null
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 2949,
      "evidence_groups": 1424,
      "retained_groups": 32,
      "retained_paths": 42,
      "cutoff": 175.76245403416306
    },
    "B": {
      "observed_paths": 6164,
      "evidence_groups": 2406,
      "retained_groups": 33,
      "retained_paths": 35,
      "cutoff": 182.58080946982972
    },
    "C": {
      "observed_paths": 5394,
      "evidence_groups": 2271,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 197.3680065628298
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 402.2507738420717
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 163,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 671.0271990334368
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 165,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 245.86076403065329
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 123,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 298.43646089626395
    },
    "DPA1": {
      "observed_paths": 758,
      "evidence_groups": 690,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 527.1234285976491
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 195.18236825017618
    },
    "DPB1": {
      "observed_paths": 1857,
      "evidence_groups": 1394,
      "retained_groups": 33,
      "retained_paths": 41,
      "cutoff": 678.6785058334464
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 37.0000000210563
    },
    "DQA1": {
      "observed_paths": 233,
      "evidence_groups": 201,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 310.6029043563632
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 98.55338551231534
    },
    "DQB1": {
      "observed_paths": 490,
      "evidence_groups": 415,
      "retained_groups": 32,
      "retained_paths": 44,
      "cutoff": 361.7873743451462
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 134.08826738967244
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 117,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 492.52140157171686
    },
    "DRB1": {
      "observed_paths": 365,
      "evidence_groups": 211,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 726.7333689752079
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 123,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 1298.5689905230304
    },
    "DRB5": {
      "observed_paths": 62,
      "evidence_groups": 4,
      "retained_groups": 1,
      "retained_paths": 9,
      "cutoff": 1.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 310,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 363.3248944350055
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 126,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 261.67392859549693
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 128,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 201.75993040530406
    },
    "H": {
      "observed_paths": 82,
      "evidence_groups": 71,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 55.90387815441434
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 46.679729753676945
    },
    "K": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 4.0
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 103.91480067415665
    },
    "MICA": {
      "observed_paths": 407,
      "evidence_groups": 180,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 133.42978334370852
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 94,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 98.30052121638943
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 3,
      "retained_groups": 3,
      "retained_paths": 4,
      "cutoff": 4.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 106.0
    },
    "S": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 5.0000000002714025
    },
    "T": {
      "observed_paths": 7,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 7,
      "cutoff": 8.000000158404887
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 242.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 85,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 251.90502305418957
    },
    "U": {
      "observed_paths": 3,
      "evidence_groups": 3,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 1.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 101.0
    },
    "W": {
      "observed_paths": 12,
      "evidence_groups": 12,
      "retained_groups": 11,
      "retained_paths": 11,
      "cutoff": 2.0
    },
    "Y": {
      "observed_paths": 1,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 0.995433530170095
    }
  },
  "fit": {
    "converged": true,
    "iterations": 6,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            1
          ]
        ],
        "gene_fraction": 0.026477256179271436,
        "score_gap": 175.16997240035562
      },
      "B": {
        "pairs": [
          [
            32,
            33
          ]
        ],
        "gene_fraction": 0.027572431808821362,
        "score_gap": 38.125984232494375
      },
      "C": {
        "pairs": [
          [
            65,
            66
          ]
        ],
        "gene_fraction": 0.029923358342077072,
        "score_gap": 28.839939973608125
      },
      "DMA": {
        "pairs": [
          [
            97,
            103
          ]
        ],
        "gene_fraction": 0.024564788930799518,
        "score_gap": 24.98080212736386
      },
      "DMB": {
        "pairs": [
          [
            133,
            139
          ],
          [
            135,
            137
          ]
        ],
        "gene_fraction": 0.036435451710183,
        "score_gap": 4.851838151065749
      },
      "DOA": {
        "pairs": [
          [
            161,
            162
          ]
        ],
        "gene_fraction": 0.020256378045738946,
        "score_gap": 8.317173803996411
      },
      "DOB": {
        "pairs": [
          [
            193,
            207
          ]
        ],
        "gene_fraction": 0.021127158849499606,
        "score_gap": 20.735236241365783
      },
      "DPA1": {
        "pairs": [
          [
            225,
            228
          ]
        ],
        "gene_fraction": 0.05775405412480842,
        "score_gap": 54.94593842657923
      },
      "DPA2": {
        "pairs": [
          [
            257,
            259
          ]
        ],
        "gene_fraction": 0.03648101325667391,
        "score_gap": 62.374865225632675
      },
      "DPB1": {
        "pairs": [
          [
            263,
            266
          ]
        ],
        "gene_fraction": 0.06483446160193089,
        "score_gap": 158.67736700589012
      },
      "DPB2": {
        "pairs": [
          [
            296,
            298
          ]
        ],
        "gene_fraction": 0.09051699697733634,
        "score_gap": 1718.903529923642
      },
      "DQA1": {
        "pairs": [
          [
            303,
            306
          ]
        ],
        "gene_fraction": 0.03684079166977859,
        "score_gap": 78.57013668172294
      },
      "DQA2": {
        "pairs": [
          [
            335,
            336
          ]
        ],
        "gene_fraction": 0.02946900601225327,
        "score_gap": 54.38478518892953
      },
      "DQB1": {
        "pairs": [
          [
            367,
            369
          ]
        ],
        "gene_fraction": 0.04267589980390786,
        "score_gap": 29.90486494716606
      },
      "DQB2": {
        "pairs": [
          [
            400,
            401
          ]
        ],
        "gene_fraction": 0.03611478940060409,
        "score_gap": 0.9492144741816446
      },
      "DRA": {
        "pairs": [
          [
            431,
            431
          ]
        ],
        "gene_fraction": 0.026031762420292363,
        "score_gap": 8.31730521749705
      },
      "DRB1": {
        "pairs": [
          [
            463,
            469
          ]
        ],
        "gene_fraction": 0.10955125737619796,
        "score_gap": 10.6323818177043
      },
      "DRB4": {
        "pairs": [
          [
            495,
            499
          ],
          [
            496,
            497
          ]
        ],
        "gene_fraction": 0.06746413624618713,
        "score_gap": 26.339028675371082
      },
      "DRB5": {
        "pairs": [
          [
            527,
            527
          ]
        ],
        "gene_fraction": 0.0002739939780992817,
        "score_gap": null
      },
      "E": {
        "pairs": [
          [
            528,
            529
          ]
        ],
        "gene_fraction": 0.019431820405938154,
        "score_gap": 11.78237862874812
      },
      "F": {
        "pairs": [
          [
            560,
            562
          ]
        ],
        "gene_fraction": 0.020622960194778366,
        "score_gap": 313.73543844142114
      },
      "G": {
        "pairs": [
          [
            592,
            593
          ]
        ],
        "gene_fraction": 0.013106712624034133,
        "score_gap": 16.411663181774202
      },
      "H": {
        "pairs": [
          [
            624,
            624
          ]
        ],
        "gene_fraction": 0.007698829995077,
        "score_gap": 1.3579983016534243
      },
      "J": {
        "pairs": [
          [
            656,
            657
          ]
        ],
        "gene_fraction": 0.01966024623788192,
        "score_gap": 33.81778872194991
      },
      "K": {
        "pairs": [
          [
            688,
            688
          ]
        ],
        "gene_fraction": 0.009440459856248634,
        "score_gap": 130.8414696920372
      },
      "L": {
        "pairs": [
          [
            693,
            694
          ]
        ],
        "gene_fraction": 0.02126428500454737,
        "score_gap": 166.8911409637658
      },
      "MICA": {
        "pairs": [
          [
            699,
            703
          ]
        ],
        "gene_fraction": 0.008798454361274115,
        "score_gap": 0.6928665605082642
      },
      "MICB": {
        "pairs": [
          [
            731,
            732
          ]
        ],
        "gene_fraction": 0.008864485597243928,
        "score_gap": 10.395430912263691
      },
      "N": {
        "pairs": [
          [
            763,
            763
          ]
        ],
        "gene_fraction": 0.0006406503658608252,
        "score_gap": 2.0657283469481627
      },
      "P": {
        "pairs": [
          [
            766,
            767
          ]
        ],
        "gene_fraction": 0.014664358020467047,
        "score_gap": 375.19302076999156
      },
      "S": {
        "pairs": [
          [
            771,
            772
          ]
        ],
        "gene_fraction": 0.002747956461637987,
        "score_gap": 57.80953742857673
      },
      "T": {
        "pairs": [
          [
            778,
            780
          ]
        ],
        "gene_fraction": 0.005589974468602703,
        "score_gap": 13.792974065974704
      },
      "TAP1": {
        "pairs": [
          [
            784,
            785
          ]
        ],
        "gene_fraction": 0.017735943699958005,
        "score_gap": 25.111534336960176
      },
      "TAP2": {
        "pairs": [
          [
            802,
            805
          ]
        ],
        "gene_fraction": 0.02062295934024606,
        "score_gap": 37.4267088995548
      },
      "U": {
        "pairs": [
          [
            833,
            833
          ]
        ],
        "gene_fraction": 0.0003656585163796609,
        "score_gap": null
      },
      "V": {
        "pairs": [
          [
            834,
            835
          ]
        ],
        "gene_fraction": 0.010768601738867314,
        "score_gap": 111.68855697970139
      },
      "W": {
        "pairs": [
          [
            838,
            840
          ]
        ],
        "gene_fraction": 0.013610656376495623,
        "score_gap": 40.3562781613291
      },
      "Y": {
        "pairs": [
          [
            849,
            849
          ]
        ],
        "gene_fraction": 1.498467085765371e-17,
        "score_gap": null
      }
    },
    "unassigned_fragments": 487,
    "objective_trace": [
      -103096.95324917184,
      -103096.2832280236,
      -103096.2809457968,
      -103096.28093791504,
      -103096.28093788782,
      -103096.28093788773
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}
