{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          5
        ]
      ],
      "score_gap": 141.3400466702733,
      "distinct_support": [
        318.377771558569,
        279.9762125316962
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 597.3452160938339,
        "score_gap": 58.82484250943651,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG81b8d891cb0e4efd4a3be3acee86a8650f3d386ce68676616ba06e984fd9bd0f#0#HLA_A"
        ],
        [
          "PGffac2673e4a826e6225940434ed8211c6c1ee13e1ba0e1a525028d735c12362f#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          33,
          34
        ]
      ],
      "score_gap": 171.8522865967243,
      "distinct_support": [
        280.22016500576785,
        276.5627899930853
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 604.926125827203,
        "score_gap": 58.82488589713222,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGd8224c834412c031dc136e637a351a8f5fc040147f75585d7f15fb2a9add4734#0#HLA_B"
        ],
        [
          "PG45a732c89495e9e9eaaa1c3b95fb82d24b518f4fd5f8ba078d34434dbc4da1bc#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          65,
          67
        ]
      ],
      "score_gap": 105.74996479843685,
      "distinct_support": [
        378.42331111283295,
        344.669699236244
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 719.9397975586296,
        "score_gap": 164.7118701289479,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG4fc2493e5b61d0076697d977c1d7bd49a350c31c789322855fe4793e8579ccdb#0#HLA_C",
          "PG96e77684761ba8035b820795538c99bfea2068c9492d551210fa2c6ead6f7782#0#HLA_C"
        ],
        [
          "PG1fa87a31f905e3b4fbd9eea24374180a7188a0b1a8f4aea5e1fa2e1e12f912c2#0#HLA_C",
          "PGc359269849597ffa2afaa702362088542e010bd5c56c41cc475b4e876b2ee84f#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          97,
          97
        ]
      ],
      "score_gap": 23.56572057683661,
      "distinct_support": [
        650.4247715306847,
        650.4247715306847
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 652.9753691995602,
        "score_gap": 23.22781594870179,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:02"
        ],
        [
          "IPD:HLA-DMA*01:01:01:02"
        ]
      ]
    },
    "DMB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          129,
          131
        ]
      ],
      "score_gap": 21.486654973428813,
      "distinct_support": [
        48.0,
        40.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 840.9728860113453,
        "score_gap": 19.634814063401357,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMB*01:03:01:22"
        ],
        [
          "IPD:HLA-DMB*01:03:01:17"
        ]
      ]
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          163,
          167
        ]
      ],
      "score_gap": 91.55035035881156,
      "distinct_support": [
        192.87713633334488,
        183.9863116345025
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 463.9555385284503,
        "score_gap": 37.67215005344838,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:01:01"
        ],
        [
          "IPD:HLA-DOA*01:01:02:30"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          193,
          196
        ]
      ],
      "score_gap": 27.031105409449083,
      "distinct_support": [
        164.7879446488323,
        133.48896354884766
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 584.9628391217615,
        "score_gap": 26.643560340588294,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:05:01:01"
        ],
        [
          "IPD:HLA-DOB*01:01:01:29"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          225,
          227
        ]
      ],
      "score_gap": 84.18844123151212,
      "distinct_support": [
        106.0,
        82.97516377125129
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1318.6629843995288,
        "score_gap": 47.26923447941968,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG9924abba6a7d55a68f34a5f4a2501f95dbc03dfba3270805a97fc6913615e035#0#HLA_DPA1",
          "PGe88c90e33c88f11c85627b67500dbd63899f6955595ac1027f0900d4327d3021#0#HLA_DPA1"
        ],
        [
          "PG7612904ed84fdefae6dd00a68b3afc38e4cda86912131dc63dfe3bf94ac82298#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          257,
          258
        ]
      ],
      "score_gap": 453.35413028561743,
      "distinct_support": [
        366.0,
        318.2662739132349
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 866.956133007064,
        "score_gap": 183.81645685099272,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*01:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:02"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          263,
          264
        ]
      ],
      "score_gap": 95.59838703837886,
      "distinct_support": [
        652.141742450197,
        634.9403034873919
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1580.8305897851396,
        "score_gap": 98.04630129808959,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG260da0820cd6f183fc67475200fa306e799a12b75998d4e19c9d3c1c1433924d#0#HLA_DPB1"
        ],
        [
          "PG6e93bf1d86e25bc607b11aae23cb4dd990051d5a0ede884ec33f513729fc33eb#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          295,
          296
        ]
      ],
      "score_gap": 1476.2924042272352,
      "distinct_support": [
        842.4904972774019,
        836.6693798468532
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2436.927105157571,
        "score_gap": 652.1530166791281,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*03:01:01:01"
        ],
        [
          "IPD:HLA-DPB2*03:01:01:03"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          302,
          304
        ]
      ],
      "score_gap": 166.36070158871007,
      "distinct_support": [
        453.595888636004,
        416.38561855775
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 867.945588187694,
        "score_gap": 66.66979715517107,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG491cfddb6b930b9142fecfda8231bf1922d22aa446ece6549df9fbf31daf81af#0#HLA_DQA1",
          "PGad7eb2080b0bc0e5b655bcf478cc0eead1f91df21d674174157c9dedec8e6ae6#0#HLA_DQA1"
        ],
        [
          "PGec088c8be1c44344cc64701604d4d9a80dc7cb704eda3f30ddcb56b5a2e2215c#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          334,
          345
        ]
      ],
      "score_gap": 24.45077730678895,
      "distinct_support": [
        311.8030753917586,
        204.06088759664976
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 734.7473390256762,
        "score_gap": 20.49988705697183,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:01:02:01"
        ],
        [
          "IPD:HLA-DQA2*01:01:04:03"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          366,
          367
        ]
      ],
      "score_gap": 43.53098941601638,
      "distinct_support": [
        249.66776356860407,
        244.25284151748735
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1089.9019677966926,
        "score_gap": 47.793463443373184,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGe273272eddbd9b81b8be97a1cb5f756b25e6220e559ca23847ab57f26a0b2ffb#0#HLA_DQB1"
        ],
        [
          "PG8ebc981c546268e1b19b608b25afcba00da76a0e79596229eba9555916a6af01#0#HLA_DQB1",
          "PG95ed2f6b4f6e2859f57e965284076a52a838bbc888c44bc5cfc4622130f50e0f#0#HLA_DQB1",
          "PG9f0f03a5274c922eaf88fe6c8a53b9930756d83a548f587ea4d52807d49386f1#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          398,
          402
        ]
      ],
      "score_gap": 123.11353027564473,
      "distinct_support": [
        76.02573444806146,
        43.2080316803333
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 900.97223740193,
        "score_gap": 69.55412192799636,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ],
        [
          "IPD:HLA-DQB2*01:03"
        ]
      ]
    },
    "DRA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          430,
          431
        ]
      ],
      "score_gap": 1.2873176074645016
    },
    "DRB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          462,
          469
        ]
      ],
      "score_gap": 166.1208775946434,
      "distinct_support": [
        1417.8910512524237,
        982.2351011202272
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 2576.3465497238076,
        "score_gap": 67.81941170869686,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGae80ff6133e2dda09e9f0bada889c9d5e05cc93dd7331603164ee61f6b1d308f#0#HLA_DRB1"
        ],
        [
          "PGa2ff6dda1dcdfa4d4bfdc6c8d7c79f616f78c1c79ae5c735a182b8e301bfb42c#0#HLA_DRB1"
        ]
      ]
    },
    "DRB3": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          494,
          494
        ]
      ],
      "score_gap": 5.70025687465386
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          526,
          526
        ]
      ],
      "score_gap": 4.269502284267219
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          558,
          558
        ]
      ],
      "score_gap": null
    },
    "E": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          562,
          563
        ]
      ],
      "score_gap": 18.549011206428986,
      "distinct_support": [
        36.2712965771784,
        25.983714522709366
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 458.97192910250516,
        "score_gap": 16.8516709347574,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-E*01:01:01:06"
        ],
        [
          "IPD:HLA-E*01:01:01:07"
        ]
      ]
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          591,
          593
        ]
      ],
      "score_gap": 23.565130762479384,
      "distinct_support": [
        68.42261586726963,
        63.40036192451095
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 444.96823767634356,
        "score_gap": 11.764595615261314,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-F*01:01:02:10"
        ],
        [
          "IPD:HLA-F*01:01:02:09"
        ]
      ]
    },
    "G": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          624,
          633
        ]
      ],
      "score_gap": 5.54451475715905
    },
    "H": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          656,
          659
        ]
      ],
      "score_gap": 37.2114847322664,
      "distinct_support": [
        188.6464648460958,
        166.8289048886186
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 380.33797972260277,
        "score_gap": 17.052176503920037,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-H*02:07:01:01"
        ],
        [
          "IPD:HLA-H*02:08:01:01"
        ]
      ]
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          688,
          689
        ]
      ],
      "score_gap": 90.76081884528685,
      "distinct_support": [
        151.05788166048097,
        135.1827140065244
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 372.9566588934892,
        "score_gap": 43.81918680494286,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:09"
        ],
        [
          "IPD:HLA-J*01:01:01:04"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          720,
          721
        ]
      ],
      "score_gap": 133.03735576088366,
      "distinct_support": [
        193.15444184545734,
        50.26576467288775
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 268.9309365691917,
        "score_gap": 63.6402884125458,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:04"
        ],
        [
          "IPD:HLA-K*01:01:01:01"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          727,
          730
        ]
      ],
      "score_gap": 106.070351893708,
      "distinct_support": [
        206.2503084907997,
        129.0560332884574
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 393.9540556163826,
        "score_gap": 50.979307533536826,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          733,
          735
        ]
      ],
      "score_gap": 8.29863417330489
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          765,
          768
        ]
      ],
      "score_gap": 0.6930193257867359
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          797,
          798
        ]
      ],
      "score_gap": 6.203307229283382
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          801,
          803
        ]
      ],
      "score_gap": 40.60411798505811,
      "distinct_support": [
        192.990990990991,
        78.0686654340363
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 294.9529649254465,
        "score_gap": 43.81767001071864,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:01"
        ],
        [
          "IPD:HLA-P*01:01:01:01"
        ]
      ]
    },
    "R": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          806,
          806
        ]
      ],
      "score_gap": 14.552892843581503,
      "distinct_support": [
        161.0,
        161.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 160.97548055490756,
        "score_gap": 14.344948851540963,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-R*01:01:01:01"
        ],
        [
          "IPD:HLA-R*01:01:01:01"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          808,
          809
        ]
      ],
      "score_gap": 62.522696270854794,
      "distinct_support": [
        26.0,
        25.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 50.95096110982528,
        "score_gap": 35.263819575995456,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:01"
        ],
        [
          "IPD:HLA-S*01:01:01:01"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          814,
          815
        ]
      ],
      "score_gap": 89.3891155795427,
      "distinct_support": [
        22.999666332999666,
        12.249999999999961
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 313.9727365820323,
        "score_gap": 30.945388283000895,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*03:01:01:02"
        ],
        [
          "IPD:HLA-T*03:01:01:01"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          817,
          822
        ]
      ],
      "score_gap": 1.3861711498320801
    },
    "TAP2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          836,
          838
        ]
      ],
      "score_gap": 12.681740740532405,
      "distinct_support": [
        132.0,
        120.99876328699942
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 444.9615331386751,
        "score_gap": 20.26519592033185,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP2*01:01:03:11"
        ],
        [
          "IPD:TAP2*02:01:02:04"
        ]
      ]
    },
    "U": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          866,
          867
        ]
      ],
      "score_gap": 132.74593511087005,
      "distinct_support": [
        29.0,
        22.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 50.95096110982528,
        "score_gap": 66.4067900588414,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-U*01:06"
        ],
        [
          "IPD:HLA-U*01:05"
        ]
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          868,
          870
        ]
      ],
      "score_gap": 157.76492252042226,
      "distinct_support": [
        116.22425528363732,
        67.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 197.95280756013935,
        "score_gap": 74.49903772723403,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:01"
        ],
        [
          "IPD:HLA-V*01:01:01:03"
        ]
      ]
    },
    "W": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          872,
          878
        ]
      ],
      "score_gap": 2.0693016060249647
    },
    "Y": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          885,
          885
        ]
      ],
      "score_gap": 46.654139081641915,
      "distinct_support": [
        140.66530483506153,
        140.66530483506153
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 141.9749454006922,
        "score_gap": 38.4157578998927,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-Y*02:01"
        ],
        [
          "IPD:HLA-Y*02:01"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 4295,
      "evidence_groups": 1438,
      "retained_groups": 33,
      "retained_paths": 34,
      "cutoff": 203.66732495655503
    },
    "B": {
      "observed_paths": 6444,
      "evidence_groups": 2370,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 167.0377942318096
    },
    "C": {
      "observed_paths": 4718,
      "evidence_groups": 1868,
      "retained_groups": 32,
      "retained_paths": 58,
      "cutoff": 228.6790863933978
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 563.6025496267563
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 709.0461297421721
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 165,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 238.774422527885
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 357.58033198984924
    },
    "DPA1": {
      "observed_paths": 733,
      "evidence_groups": 483,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 1021.9714203601022
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 411.7337260867651
    },
    "DPB1": {
      "observed_paths": 1847,
      "evidence_groups": 1416,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 789.89783415208
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 43.00000000000051
    },
    "DQA1": {
      "observed_paths": 559,
      "evidence_groups": 239,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 299.6895530347056
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 100.8963369029253
    },
    "DQB1": {
      "observed_paths": 479,
      "evidence_groups": 227,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 709.8120978696988
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 166.98725035255092
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 119,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 549.3821960913174
    },
    "DRB1": {
      "observed_paths": 968,
      "evidence_groups": 462,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 778.6918335167704
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 209,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 690.6890807523832
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 119,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 728.4146550955556
    },
    "DRB5": {
      "observed_paths": 58,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 58,
      "cutoff": 3.0
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 300,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 397.85349600829664
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 112,
      "retained_groups": 33,
      "retained_paths": 44,
      "cutoff": 77.92808586126478
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 130,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 177.85297109836694
    },
    "H": {
      "observed_paths": 99,
      "evidence_groups": 57,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 9.0
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 34,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 44.90934715690247
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 42.01853034078533
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 109.93343157695983
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 224,
      "retained_groups": 32,
      "retained_paths": 46,
      "cutoff": 83.96826554541991
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 78,
      "retained_groups": 32,
      "retained_paths": 44,
      "cutoff": 91.56788895445888
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 9.075071822010516
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 87.009009009009
    },
    "R": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 140.0
    },
    "S": {
      "observed_paths": 7,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 7,
      "cutoff": 3.000000000252746
    },
    "T": {
      "observed_paths": 6,
      "evidence_groups": 4,
      "retained_groups": 3,
      "retained_paths": 5,
      "cutoff": 2.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 232.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 84,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 284.86651079423564
    },
    "U": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 22.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 62.77574471636269
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 13,
      "retained_paths": 13,
      "cutoff": 8.749999999999954
    },
    "Y": {
      "observed_paths": 3,
      "evidence_groups": 3,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 8.000501718269062
    }
  },
  "fit": {
    "converged": true,
    "iterations": 3,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            5
          ]
        ],
        "gene_fraction": 0.024729127663828145,
        "score_gap": 141.3400466702733
      },
      "B": {
        "pairs": [
          [
            33,
            34
          ]
        ],
        "gene_fraction": 0.024956746068650355,
        "score_gap": 171.8522865967243
      },
      "C": {
        "pairs": [
          [
            65,
            67
          ]
        ],
        "gene_fraction": 0.029932931168411385,
        "score_gap": 105.74996479843685
      },
      "DMA": {
        "pairs": [
          [
            97,
            97
          ]
        ],
        "gene_fraction": 0.026630919533611887,
        "score_gap": 23.56572057683661
      },
      "DMB": {
        "pairs": [
          [
            129,
            131
          ]
        ],
        "gene_fraction": 0.03429820221991867,
        "score_gap": 21.486654973428813
      },
      "DOA": {
        "pairs": [
          [
            163,
            167
          ]
        ],
        "gene_fraction": 0.01892194284174525,
        "score_gap": 91.55035035881156
      },
      "DOB": {
        "pairs": [
          [
            193,
            196
          ]
        ],
        "gene_fraction": 0.023857099414830853,
        "score_gap": 27.031105409449083
      },
      "DPA1": {
        "pairs": [
          [
            225,
            227
          ]
        ],
        "gene_fraction": 0.05414734358961028,
        "score_gap": 84.18844123151212
      },
      "DPA2": {
        "pairs": [
          [
            257,
            258
          ]
        ],
        "gene_fraction": 0.03535790185364099,
        "score_gap": 453.35413028561743
      },
      "DPB1": {
        "pairs": [
          [
            263,
            264
          ]
        ],
        "gene_fraction": 0.0650842708606837,
        "score_gap": 95.59838703837886
      },
      "DPB2": {
        "pairs": [
          [
            295,
            296
          ]
        ],
        "gene_fraction": 0.09938753084481457,
        "score_gap": 1476.2924042272352
      },
      "DQA1": {
        "pairs": [
          [
            302,
            304
          ]
        ],
        "gene_fraction": 0.03556138240558556,
        "score_gap": 166.36070158871007
      },
      "DQA2": {
        "pairs": [
          [
            334,
            345
          ]
        ],
        "gene_fraction": 0.029965904047405036,
        "score_gap": 24.45077730678895
      },
      "DQB1": {
        "pairs": [
          [
            366,
            367
          ]
        ],
        "gene_fraction": 0.04477677232933097,
        "score_gap": 43.53098941601638
      },
      "DQB2": {
        "pairs": [
          [
            398,
            402
          ]
        ],
        "gene_fraction": 0.03674521320128329,
        "score_gap": 123.11353027564473
      },
      "DRA": {
        "pairs": [
          [
            430,
            431
          ]
        ],
        "gene_fraction": 0.025726393152846205,
        "score_gap": 1.2873176074645016
      },
      "DRB1": {
        "pairs": [
          [
            462,
            469
          ]
        ],
        "gene_fraction": 0.10535908967418522,
        "score_gap": 166.1208775946434
      },
      "DRB3": {
        "pairs": [
          [
            494,
            494
          ]
        ],
        "gene_fraction": 0.032626377603470764,
        "score_gap": 5.70025687465386
      },
      "DRB4": {
        "pairs": [
          [
            526,
            526
          ]
        ],
        "gene_fraction": 0.033034003290736406,
        "score_gap": 4.269502284267219
      },
      "DRB5": {
        "pairs": [
          [
            558,
            558
          ]
        ],
        "gene_fraction": 0.0001213519381896647,
        "score_gap": null
      },
      "E": {
        "pairs": [
          [
            562,
            563
          ]
        ],
        "gene_fraction": 0.01871869152864345,
        "score_gap": 18.549011206428986
      },
      "F": {
        "pairs": [
          [
            591,
            593
          ]
        ],
        "gene_fraction": 0.018147565576213588,
        "score_gap": 23.565130762479384
      },
      "G": {
        "pairs": [
          [
            624,
            633
          ]
        ],
        "gene_fraction": 0.012070570498148086,
        "score_gap": 5.54451475715905
      },
      "H": {
        "pairs": [
          [
            656,
            659
          ]
        ],
        "gene_fraction": 0.015511687905574683,
        "score_gap": 37.2114847322664
      },
      "J": {
        "pairs": [
          [
            688,
            689
          ]
        ],
        "gene_fraction": 0.015210648426109275,
        "score_gap": 90.76081884528685
      },
      "K": {
        "pairs": [
          [
            720,
            721
          ]
        ],
        "gene_fraction": 0.010968067814441993,
        "score_gap": 133.03735576088366
      },
      "L": {
        "pairs": [
          [
            727,
            730
          ]
        ],
        "gene_fraction": 0.01606700535605523,
        "score_gap": 106.070351893708
      },
      "MICA": {
        "pairs": [
          [
            733,
            735
          ]
        ],
        "gene_fraction": 0.0080732270902752,
        "score_gap": 8.29863417330489
      },
      "MICB": {
        "pairs": [
          [
            765,
            768
          ]
        ],
        "gene_fraction": 0.007819881681382368,
        "score_gap": 0.6930193257867359
      },
      "N": {
        "pairs": [
          [
            797,
            798
          ]
        ],
        "gene_fraction": 0.0009771481965345922,
        "score_gap": 6.203307229283382
      },
      "P": {
        "pairs": [
          [
            801,
            803
          ]
        ],
        "gene_fraction": 0.012029349106842516,
        "score_gap": 40.60411798505811
      },
      "R": {
        "pairs": [
          [
            806,
            806
          ]
        ],
        "gene_fraction": 0.0065652171143271215,
        "score_gap": 14.552892843581503
      },
      "S": {
        "pairs": [
          [
            808,
            809
          ]
        ],
        "gene_fraction": 0.0020779818192578105,
        "score_gap": 62.522696270854794
      },
      "T": {
        "pairs": [
          [
            814,
            815
          ]
        ],
        "gene_fraction": 0.012805050661458917,
        "score_gap": 89.3891155795427
      },
      "TAP1": {
        "pairs": [
          [
            817,
            822
          ]
        ],
        "gene_fraction": 0.01623079659592934,
        "score_gap": 1.3861711498320801
      },
      "TAP2": {
        "pairs": [
          [
            836,
            838
          ]
        ],
        "gene_fraction": 0.018147292138385094,
        "score_gap": 12.681740740532405
      },
      "U": {
        "pairs": [
          [
            866,
            867
          ]
        ],
        "gene_fraction": 0.0020779818192578105,
        "score_gap": 132.74593511087005
      },
      "V": {
        "pairs": [
          [
            868,
            870
          ]
        ],
        "gene_fraction": 0.008073298836898316,
        "score_gap": 157.76492252042226
      },
      "W": {
        "pairs": [
          [
            872,
            878
          ]
        ],
        "gene_fraction": 0.011417734030385242,
        "score_gap": 2.0693016060249647
      },
      "Y": {
        "pairs": [
          [
            885,
            885
          ]
        ],
        "gene_fraction": 0.005790300101100187,
        "score_gap": 46.654139081641915
      }
    },
    "unassigned_fragments": 761,
    "objective_trace": [
      -121125.14480646155,
      -121125.14106123391,
      -121125.1410612252
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}
