{
  "decisions": {
    "A": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          0,
          1
        ]
      ],
      "score_gap": 95.04074851211044,
      "distinct_support": [
        303.08475312792893,
        278.6669043021153
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 593.94483501315,
        "score_gap": 39.21680937517726,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG11198c3644a1ce1798b7b172668e2885745baedefb1d9acc60f2b889244cf6c8#0#HLA_A",
          "PG98e0de966af4122f19bf5997ee9fa34824cfa23ec9202c107bee845e64fec4cf#0#HLA_A",
          "PGd050adbd14e81134ab1e96ea07cf93c0e067429381f6d410160ff5c49ccd9785#0#HLA_A"
        ],
        [
          "PG132accc1c8d0968ea5a22e046bda045f7c90a370993e7c1fc34f69e94f810a52#0#HLA_A",
          "PG2e48ab185d29d306e9626ea887c850cfb5851d7b703fa4780396056b6e193e6a#0#HLA_A"
        ]
      ]
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          33,
          44
        ]
      ],
      "score_gap": 150.9748901926796,
      "distinct_support": [
        311.9008878178221,
        219.84999269270992
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 567.0386330619831,
        "score_gap": 70.58989170961019,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG197fef4acbc72d66e15a8fee1a081a2f5547c771cb416c86830716235f09fe41#0#HLA_B"
        ],
        [
          "PG7f032515b10bf18e5bca93a78d4902821fc39411673b5aa863a21dca82ba6c7e#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          66,
          67
        ]
      ],
      "score_gap": 235.72016616207839,
      "distinct_support": [
        310.8642726195118,
        288.18640169471564
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 645.837142779718,
        "score_gap": 96.32140237928616,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG491ba985e20c23327b9b1af79570b502736ce1a852b3af4e5791002c2811aec2#0#HLA_C"
        ],
        [
          "PG221677d95b127535ced6586abb6b2c1901909548fe1267061776d8af3cfca153#0#HLA_C",
          "PGdc66ef9b98a6ccdcc8b8373ca01cdba16b71eec828c7db12818733c514a483c5#0#HLA_C"
        ]
      ]
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          99,
          101
        ]
      ],
      "score_gap": 23.565698003891157,
      "distinct_support": [
        48.98967008266651,
        36.9539489236868
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 586.9740527897384,
        "score_gap": 23.227800526360554,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:04"
        ],
        [
          "IPD:HLA-DMA*01:01:01:07"
        ]
      ]
    },
    "DMB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          138,
          145
        ]
      ],
      "score_gap": 8.411769408092368
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          163,
          163
        ]
      ],
      "score_gap": 31.88255360124458,
      "distinct_support": [
        471.7786977246167,
        471.7786977246167
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 471.977438977059,
        "score_gap": 28.009731598064967,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:02:32"
        ],
        [
          "IPD:HLA-DOA*01:01:02:32"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          195,
          195
        ]
      ],
      "score_gap": 10.396565871749772,
      "distinct_support": [
        526.0324882750666,
        526.0324882750666
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 526.9774066463259,
        "score_gap": 10.247514235864992,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:24"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          227,
          228
        ]
      ],
      "score_gap": 138.38466796229477,
      "distinct_support": [
        645.6999861669902,
        630.4671257625226
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1366.9566086581017,
        "score_gap": 133.51997693703936,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG67016464e1703c4632f48e4f978e646cc47e796f0e466a8722f4dac2ff349d71#0#HLA_DPA1"
        ],
        [
          "PG7612904ed84fdefae6dd00a68b3afc38e4cda86912131dc63dfe3bf94ac82298#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          259,
          262
        ]
      ],
      "score_gap": 11.089919135440141,
      "distinct_support": [
        182.0,
        35.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 827.9697811081212,
        "score_gap": 10.9308518861329,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPA2*01:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:01:03"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          265,
          267
        ]
      ],
      "score_gap": 30.177303239237517,
      "distinct_support": [
        590.8763329626344,
        512.3734565874921
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1360.9610216829215,
        "score_gap": 76.43281128328499,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PGa4481654789cb6075e9df3db95cbe0e3569feb1187a4959e31de15b000ccde2e#0#HLA_DPB1"
        ],
        [
          "PG22bc9102acfbcf328fc80aaf993eb390ed2dc97902a3142a752252d7e8ec9919#0#HLA_DPB1"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          297,
          298
        ]
      ],
      "score_gap": 3249.853563541008,
      "distinct_support": [
        966.9576091963183,
        686.6875397391962
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1987.9586608010254,
        "score_gap": 1449.987060251604,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DPB2*03:01:01:03"
        ],
        [
          "IPD:HLA-DPB2*01:01:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          304,
          308
        ]
      ],
      "score_gap": 238.91931968723657,
      "distinct_support": [
        356.8630077915691,
        314.21915879693603
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 809.8504295793027,
        "score_gap": 160.57856605599113,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG1d66764fee06a5ddd00e1152f0ec94a8081f25a260f2d91c1d7134bf988f3cd7#0#HLA_DQA1",
          "PG347651ca4c5410091f6c094131c96650f7557ebe9b5bcdba1244f0dc54a29286#0#HLA_DQA1"
        ],
        [
          "PG4171bcbcde5514045bc71f350c6cd24d574329dceeaf8e86391844db890b1b8c#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          336,
          338
        ]
      ],
      "score_gap": 4.803420502896188
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          368,
          370
        ]
      ],
      "score_gap": 150.498825922361,
      "distinct_support": [
        530.8443284545442,
        495.7228471518589
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1022.9550556876285,
        "score_gap": 109.81041997985017,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "PG7e865e61e7d1e26283816a9b79e1d3472dc4f69060815f8446b5981d40374484#0#HLA_DQB1",
          "PG8d2756e8481eb14237edb7fc1bbc1883751ae87102da75fd3d6612fd7d8999d3#0#HLA_DQB1",
          "PGb999f7376011d6e73ba4f003e9732463c441686975e11ed05c7757f379f23bd6#0#HLA_DQB1"
        ],
        [
          "PGce334f841a0bc9c4aa301fec3f495c8de349e24fecf58e7740eb33ba9b25057d#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          400,
          409
        ]
      ],
      "score_gap": 60.45561621568049,
      "distinct_support": [
        104.00169932275335,
        18.15451810215383
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 868.9742801717606,
        "score_gap": 0.22623279155628495,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          432,
          434
        ]
      ],
      "score_gap": 53.61430464120349,
      "distinct_support": [
        241.0199409706879,
        235.88942450518675
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 610.9598099234067,
        "score_gap": 20.114371730698167,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-DRA*01:01:01:05"
        ],
        [
          "IPD:HLA-DRA*01:01:01:14"
        ]
      ]
    },
    "DRB1": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          464,
          465
        ]
      ],
      "score_gap": 10.531708672846435,
      "distinct_support": [
        948.5812924111991,
        895.9866183262186
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 1857.7584644992194,
        "score_gap": 3.9218782275770536,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "DRB3": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          497,
          500
        ]
      ],
      "score_gap": 2.7724720338301267
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          529,
          529
        ]
      ],
      "score_gap": null
    },
    "DRB5": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          530,
          543
        ]
      ],
      "score_gap": 0.013209549273597077
    },
    "E": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          562,
          563
        ]
      ],
      "score_gap": 22.87230627905228,
      "distinct_support": [
        42.0,
        41.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 480.97347851743154,
        "score_gap": 22.54443659719304,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-E*01:01:01:06"
        ],
        [
          "IPD:HLA-E*01:03:01:01"
        ]
      ]
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          594,
          595
        ]
      ],
      "score_gap": 25.932869967800798,
      "distinct_support": [
        176.00791071038634,
        162.74075938197169
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 415.959017054695,
        "score_gap": 10.398374384886182,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-F*01:03:01:03"
        ],
        [
          "IPD:HLA-F*01:01:02:10"
        ]
      ]
    },
    "G": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          626,
          627
        ]
      ],
      "score_gap": 12.475327112217201,
      "distinct_support": [
        27.992009644253358,
        24.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 306.97361211530153,
        "score_gap": 12.296639982034193,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-G*01:01:22:01"
        ],
        [
          "IPD:HLA-G*01:01:02:01"
        ]
      ]
    },
    "H": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          658,
          659
        ]
      ],
      "score_gap": 10.396308404335286,
      "distinct_support": [
        158.5844915186836,
        153.94532575798044
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 376.9587355533531,
        "score_gap": 10.247338326100703,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-H*02:03:02:01"
        ],
        [
          "IPD:HLA-H*02:05:01:01"
        ]
      ]
    },
    "J": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          690,
          691
        ]
      ],
      "score_gap": 4.124344456373365
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          722,
          723
        ]
      ],
      "score_gap": 1294.2807891321863,
      "distinct_support": [
        230.0,
        159.9009009009009
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 416.95636927945816,
        "score_gap": 468.04200511253646,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-K*01:01:01:04"
        ],
        [
          "IPD:HLA-K*01:02"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          729,
          730
        ]
      ],
      "score_gap": 119.47225876351877,
      "distinct_support": [
        200.0,
        190.06697989911123
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 441.9575507360974,
        "score_gap": 50.98045094690826,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-L*01:01:01:01"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          735,
          737
        ]
      ],
      "score_gap": 1.3860531914688181
    },
    "MICB": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          767,
          768
        ]
      ],
      "score_gap": 6.238185838155914
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          799,
          800
        ]
      ],
      "score_gap": 0.000903994106920436
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          803,
          804
        ]
      ],
      "score_gap": 132.57976173851057,
      "distinct_support": [
        179.0,
        132.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 310.95489936127893,
        "score_gap": 58.82106868557753,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:02"
        ],
        [
          "IPD:HLA-P*01:02"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          808,
          809
        ]
      ],
      "score_gap": 74.0297239137144,
      "distinct_support": [
        32.9999999997401,
        29.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 73.95855710364711,
        "score_gap": 39.19583136823843,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-S*01:02:01:03"
        ],
        [
          "IPD:HLA-S*01:03"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          813,
          814
        ]
      ],
      "score_gap": 116.44108558614971,
      "distinct_support": [
        85.96243125775709,
        83.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 286.9641624067476,
        "score_gap": 62.946079245386386,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-T*01:01:01:01"
        ],
        [
          "IPD:HLA-T*02:01:01:02"
        ]
      ]
    },
    "TAP1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          820,
          821
        ]
      ],
      "score_gap": 22.179050935897976,
      "distinct_support": [
        27.0,
        20.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 434.9750133220093,
        "score_gap": 21.861165846732057,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:TAP1*01:01:01:05"
        ],
        [
          "IPD:TAP1*03:01"
        ]
      ]
    },
    "TAP2": {
      "reason": "insufficient_within_gene_discrimination",
      "pairs": [
        [
          837,
          840
        ]
      ],
      "score_gap": 18.020568546562572,
      "distinct_support": [
        30.0,
        7.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 465.97565091885616,
        "score_gap": 6.957234489128133,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      }
    },
    "U": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          869,
          870
        ]
      ],
      "score_gap": 84.81464156133006,
      "distinct_support": [
        24.0,
        15.0
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 38.954899361233316,
        "score_gap": 42.38380514365247,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-U*01:03"
        ],
        [
          "IPD:HLA-U*01:02"
        ]
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          872,
          873
        ]
      ],
      "score_gap": 77.1749577690789,
      "distinct_support": [
        117.0,
        103.01722652153002
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 220.95500052259405,
        "score_gap": 35.97368315443978,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:03"
        ],
        [
          "IPD:HLA-V*01:01:01:01"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          876,
          877
        ]
      ],
      "score_gap": 175.2276273094758,
      "distinct_support": [
        151.0,
        126.19961780379515
      ],
      "gene_discrimination": {
        "weighted_gene_fragments": 287.95572161662204,
        "score_gap": 78.42717775750523,
        "rule": "Context-weighted within-gene error evidence; flank matches supply no allele-discrimination bonus"
      },
      "selected_paths": [
        [
          "IPD:HLA-W*04:01"
        ],
        [
          "IPD:HLA-W*03:01:01:01"
        ]
      ]
    },
    "Y": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          889,
          889
        ]
      ],
      "score_gap": null
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 4400,
      "evidence_groups": 1655,
      "retained_groups": 33,
      "retained_paths": 46,
      "cutoff": 206.20882832663023
    },
    "B": {
      "observed_paths": 5799,
      "evidence_groups": 1931,
      "retained_groups": 33,
      "retained_paths": 36,
      "cutoff": 198.81306680312008
    },
    "C": {
      "observed_paths": 5245,
      "evidence_groups": 1660,
      "retained_groups": 33,
      "retained_paths": 40,
      "cutoff": 238.14217678285905
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 480.11714140227275
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 163,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 640.9413819909477
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 320.81515566975025
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 122,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 349.6732661468883
    },
    "DPA1": {
      "observed_paths": 748,
      "evidence_groups": 687,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 552.635246240533
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 197.03016998765327
    },
    "DPB1": {
      "observed_paths": 1845,
      "evidence_groups": 1455,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 692.4117593494196
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 13.000062103514392
    },
    "DQA1": {
      "observed_paths": 357,
      "evidence_groups": 252,
      "retained_groups": 32,
      "retained_paths": 35,
      "cutoff": 328.4701675936208
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 42,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 119.73092160416957
    },
    "DQB1": {
      "observed_paths": 806,
      "evidence_groups": 303,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 408.8443284545441
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 156.96739824550045
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 122,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 278.35344539628335
    },
    "DRB1": {
      "observed_paths": 941,
      "evidence_groups": 546,
      "retained_groups": 33,
      "retained_paths": 36,
      "cutoff": 707.5928746393666
    },
    "DRB3": {
      "observed_paths": 297,
      "evidence_groups": 112,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 598.0638136559367
    },
    "DRB4": {
      "observed_paths": 103,
      "evidence_groups": 2,
      "retained_groups": 1,
      "retained_paths": 16,
      "cutoff": 1.0
    },
    "DRB5": {
      "observed_paths": 73,
      "evidence_groups": 66,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 663.0391027040137
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 317,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 400.4802704533584
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 164.26118002292998
    },
    "G": {
      "observed_paths": 183,
      "evidence_groups": 131,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 231.81068956629218
    },
    "H": {
      "observed_paths": 96,
      "evidence_groups": 73,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 89.42212689940723
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 79.5794490242898
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 11.099099099099105
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 85.95893075681244
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 222,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 137.86479166574384
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 89,
      "retained_groups": 32,
      "retained_paths": 38,
      "cutoff": 102.45853806719867
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 6.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 82.0
    },
    "S": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 23.0
    },
    "T": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 18.000000000000956
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 262.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 79,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 244.98658383135086
    },
    "U": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 3,
      "retained_paths": 3,
      "cutoff": 2.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 94.0
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 13,
      "retained_paths": 13,
      "cutoff": 24.743420793193707
    },
    "Y": {
      "observed_paths": 1,
      "evidence_groups": 1,
      "retained_groups": 1,
      "retained_paths": 1,
      "cutoff": 1.9986886624148514
    }
  },
  "fit": {
    "converged": true,
    "iterations": 6,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            1
          ]
        ],
        "gene_fraction": 0.027003773846207325,
        "score_gap": 95.04074851211044
      },
      "B": {
        "pairs": [
          [
            33,
            44
          ]
        ],
        "gene_fraction": 0.025411538789904403,
        "score_gap": 150.9748901926796
      },
      "C": {
        "pairs": [
          [
            66,
            67
          ]
        ],
        "gene_fraction": 0.028728506817907118,
        "score_gap": 235.72016616207839
      },
      "DMA": {
        "pairs": [
          [
            99,
            101
          ]
        ],
        "gene_fraction": 0.02602952284019997,
        "score_gap": 23.565698003891157
      },
      "DMB": {
        "pairs": [
          [
            138,
            145
          ]
        ],
        "gene_fraction": 0.03445501161234463,
        "score_gap": 8.411769408092368
      },
      "DOA": {
        "pairs": [
          [
            163,
            163
          ]
        ],
        "gene_fraction": 0.020929966954210552,
        "score_gap": 31.88255360124458
      },
      "DOB": {
        "pairs": [
          [
            195,
            195
          ]
        ],
        "gene_fraction": 0.02336895536931296,
        "score_gap": 10.396565871749772
      },
      "DPA1": {
        "pairs": [
          [
            227,
            228
          ]
        ],
        "gene_fraction": 0.06097281110867583,
        "score_gap": 138.38466796229477
      },
      "DPA2": {
        "pairs": [
          [
            259,
            262
          ]
        ],
        "gene_fraction": 0.03671654347596088,
        "score_gap": 11.089919135440141
      },
      "DPB1": {
        "pairs": [
          [
            265,
            267
          ]
        ],
        "gene_fraction": 0.06075128110545852,
        "score_gap": 30.177303239237517
      },
      "DPB2": {
        "pairs": [
          [
            297,
            298
          ]
        ],
        "gene_fraction": 0.08815656351753741,
        "score_gap": 3249.853563541008
      },
      "DQA1": {
        "pairs": [
          [
            304,
            308
          ]
        ],
        "gene_fraction": 0.03617909269545858,
        "score_gap": 238.91931968723657
      },
      "DQA2": {
        "pairs": [
          [
            336,
            338
          ]
        ],
        "gene_fraction": 0.03179422206498653,
        "score_gap": 4.803420502896188
      },
      "DQB1": {
        "pairs": [
          [
            368,
            370
          ]
        ],
        "gene_fraction": 0.045540591408600554,
        "score_gap": 150.498825922361
      },
      "DQB2": {
        "pairs": [
          [
            400,
            409
          ]
        ],
        "gene_fraction": 0.03853489905747155,
        "score_gap": 60.45561621568049
      },
      "DRA": {
        "pairs": [
          [
            432,
            434
          ]
        ],
        "gene_fraction": 0.02709317771530031,
        "score_gap": 53.61430464120349
      },
      "DRB1": {
        "pairs": [
          [
            464,
            465
          ]
        ],
        "gene_fraction": 0.0824714890171652,
        "score_gap": 10.531708672846435
      },
      "DRB3": {
        "pairs": [
          [
            497,
            500
          ]
        ],
        "gene_fraction": 0.03427786404675047,
        "score_gap": 2.7724720338301267
      },
      "DRB4": {
        "pairs": [
          [
            529,
            529
          ]
        ],
        "gene_fraction": 8.769053895723364e-05,
        "score_gap": null
      },
      "DRB5": {
        "pairs": [
          [
            530,
            543
          ]
        ],
        "gene_fraction": 0.03472123718340718,
        "score_gap": 0.013209549273597077
      },
      "E": {
        "pairs": [
          [
            562,
            563
          ]
        ],
        "gene_fraction": 0.021328898756190273,
        "score_gap": 22.87230627905228
      },
      "F": {
        "pairs": [
          [
            594,
            595
          ]
        ],
        "gene_fraction": 0.018445814909475555,
        "score_gap": 25.932869967800798
      },
      "G": {
        "pairs": [
          [
            626,
            627
          ]
        ],
        "gene_fraction": 0.013612827704366311,
        "score_gap": 12.475327112217201
      },
      "H": {
        "pairs": [
          [
            658,
            659
          ]
        ],
        "gene_fraction": 0.016716336897047573,
        "score_gap": 10.396308404335286
      },
      "J": {
        "pairs": [
          [
            690,
            691
          ]
        ],
        "gene_fraction": 0.016938772443412815,
        "score_gap": 4.124344456373365
      },
      "K": {
        "pairs": [
          [
            722,
            723
          ]
        ],
        "gene_fraction": 0.018490042763028965,
        "score_gap": 1294.2807891321863
      },
      "L": {
        "pairs": [
          [
            729,
            730
          ]
        ],
        "gene_fraction": 0.019598726904558127,
        "score_gap": 119.47225876351877
      },
      "MICA": {
        "pairs": [
          [
            735,
            737
          ]
        ],
        "gene_fraction": 0.008291425726154007,
        "score_gap": 1.3860531914688181
      },
      "MICB": {
        "pairs": [
          [
            767,
            768
          ]
        ],
        "gene_fraction": 0.008468743064053647,
        "score_gap": 6.238185838155914
      },
      "N": {
        "pairs": [
          [
            799,
            800
          ]
        ],
        "gene_fraction": 0.0008409279375865466,
        "score_gap": 0.000903994106920436
      },
      "P": {
        "pairs": [
          [
            803,
            804
          ]
        ],
        "gene_fraction": 0.013789378961321598,
        "score_gap": 132.57976173851057
      },
      "S": {
        "pairs": [
          [
            808,
            809
          ]
        ],
        "gene_fraction": 0.003279712180146738,
        "score_gap": 74.0297239137144
      },
      "T": {
        "pairs": [
          [
            813,
            814
          ]
        ],
        "gene_fraction": 0.012725503254499808,
        "score_gap": 116.44108558614971
      },
      "TAP1": {
        "pairs": [
          [
            820,
            821
          ]
        ],
        "gene_fraction": 0.019289084398569488,
        "score_gap": 22.179050935897976
      },
      "TAP2": {
        "pairs": [
          [
            837,
            840
          ]
        ],
        "gene_fraction": 0.020663816042336376,
        "score_gap": 18.020568546562572
      },
      "U": {
        "pairs": [
          [
            869,
            870
          ]
        ],
        "gene_fraction": 0.0017274655271625142,
        "score_gap": 84.81464156133006
      },
      "V": {
        "pairs": [
          [
            872,
            873
          ]
        ],
        "gene_fraction": 0.009798309149284692,
        "score_gap": 77.1749577690789
      },
      "W": {
        "pairs": [
          [
            876,
            877
          ]
        ],
        "gene_fraction": 0.01276947421498716,
        "score_gap": 175.2276273094758
      },
      "Y": {
        "pairs": [
          [
            889,
            889
          ]
        ],
        "gene_fraction": 7.198782152787094e-16,
        "score_gap": null
      }
    },
    "unassigned_fragments": 1354,
    "objective_trace": [
      -122215.59761175115,
      -122214.27848246097,
      -122214.26986240108,
      -122214.26980580365,
      -122214.26980543204,
      -122214.26980542959
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}