{
  "decisions": {
    "A": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          0,
          1
        ]
      ],
      "score_gap": 0.6930974725983106
    },
    "B": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          33,
          34
        ]
      ],
      "score_gap": 168.37112914204772,
      "distinct_support": [
        227.56605527403985,
        207.45707544180755
      ],
      "selected_paths": [
        [
          "PG08943cfaff076497b3c87d63b63dde56f2ec286915775c0be0f056ef79b3335b#0#HLA_B",
          "PG134c2b4f7eb7a3ec9a6dc74ad37004932ec4bb9ea39ad34cde54734d18210ff1#0#HLA_B",
          "PGb5eba111657948d068f64aeba7712b7cd1d4356c30e0b245cc0d26eb5ae028e7#0#HLA_B"
        ],
        [
          "PG8f3b9af4cef3f3ffa3fc7e53cdb7685d23695e5260e9d37a90a88fede45732ed#0#HLA_B"
        ]
      ]
    },
    "C": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          65,
          67
        ]
      ],
      "score_gap": 9.440311224607285
    },
    "DMA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          97,
          97
        ]
      ],
      "score_gap": 15.978307311408571,
      "distinct_support": [
        581.7210315532227,
        581.7210315532227
      ],
      "selected_paths": [
        [
          "IPD:HLA-DMA*01:01:01:03"
        ],
        [
          "IPD:HLA-DMA*01:01:01:03"
        ]
      ]
    },
    "DMB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          129,
          129
        ]
      ],
      "score_gap": 11.783022007381078,
      "distinct_support": [
        746.9042054337951,
        746.9042054337951
      ],
      "selected_paths": [
        [
          "IPD:HLA-DMB*01:03:01:03"
        ],
        [
          "IPD:HLA-DMB*01:03:01:03"
        ]
      ]
    },
    "DOA": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          161,
          165
        ]
      ],
      "score_gap": 46.12870402536646,
      "distinct_support": [
        161.9444264957024,
        156.9448179003171
      ],
      "selected_paths": [
        [
          "IPD:HLA-DOA*01:01:01:01"
        ],
        [
          "IPD:HLA-DOA*01:01:02:45"
        ]
      ]
    },
    "DOB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          193,
          197
        ]
      ],
      "score_gap": 28.975534534751205,
      "distinct_support": [
        169.77604239495767,
        160.48797657713644
      ],
      "selected_paths": [
        [
          "IPD:HLA-DOB*01:01:01:24"
        ],
        [
          "IPD:HLA-DOB*01:01:01:03"
        ]
      ]
    },
    "DPA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          225,
          257
        ]
      ],
      "score_gap": 65.252518259309,
      "distinct_support": [
        620.2301119056394,
        572.5326345480653
      ],
      "selected_paths": [
        [
          "PG6b848a3a007b2f38f29b4654cd8e1774b6a85b3f0896731f4f950d948629d56c#0#HLA_DPA1"
        ],
        [
          "PG18571131a7301cf40b856c907d2a9ce85d13578dcb08ed2592f1fec71f06bfbc#0#HLA_DPA1",
          "PG22dee041d2a1ae0cdc1936bc6522017e2909f1ccc1da4d739555c5fdb313446c#0#HLA_DPA1",
          "PG892c293c0d45abee5094160addb0b11092581d47593f5606a221ab3650f466f3#0#HLA_DPA1",
          "PG8c618a56c65896fe8383b8bbbcf98e4cbe441866e8baad5d8a0d09c4b33bf12f#0#HLA_DPA1",
          "PGe3b392560417a4ee51383a62c8b7f43764e4b74412423d68f43a5afda209e480#0#HLA_DPA1"
        ]
      ]
    },
    "DPA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          260,
          261
        ]
      ],
      "score_gap": 28.41791590763023,
      "distinct_support": [
        38.0,
        12.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-DPA2*02:01:01:01"
        ],
        [
          "IPD:HLA-DPA2*01:01:01:01"
        ]
      ]
    },
    "DPB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          266,
          269
        ]
      ],
      "score_gap": 66.93479902975378,
      "distinct_support": [
        583.6991997440439,
        558.4771084802546
      ],
      "selected_paths": [
        [
          "PG44994beb58887937270e0bdb62ed94ceb076c0f9663b76245b762931138326d7#0#HLA_DPB1"
        ],
        [
          "IPD:HLA-DPB1*135:01:01:03"
        ]
      ]
    },
    "DPB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          298,
          299
        ]
      ],
      "score_gap": 761.753696628497,
      "distinct_support": [
        942.0163663198633,
        591.8355358719443
      ],
      "selected_paths": [
        [
          "IPD:HLA-DPB2*01:01:02"
        ],
        [
          "IPD:HLA-DPB2*03:01:01:02"
        ]
      ]
    },
    "DQA1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          305,
          307
        ]
      ],
      "score_gap": 117.50067078562279,
      "distinct_support": [
        308.3073678882106,
        283.6586641331896
      ],
      "selected_paths": [
        [
          "PG5d5839b9ecfcbf99badf398b9ce3fad87243fc0ba7a9a5699bad955d137ffdd2#0#HLA_DQA1"
        ],
        [
          "PG871e1a794e41f6b5e94b93defa07df2249f6f2cb4537dae2027179fe2b518451#0#HLA_DQA1",
          "PGda50648f52139054a12ce4c04fa5c8fec1d4d114f2f28639c07805d7bf367ddf#0#HLA_DQA1"
        ]
      ]
    },
    "DQA2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          337,
          339
        ]
      ],
      "score_gap": 83.33730446377012,
      "distinct_support": [
        219.01486267671535,
        180.28501645416236
      ],
      "selected_paths": [
        [
          "IPD:HLA-DQA2*01:01:02:01"
        ],
        [
          "IPD:HLA-DQA2*01:01:04:03"
        ]
      ]
    },
    "DQB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          369,
          370
        ]
      ],
      "score_gap": 19.98058043673518,
      "distinct_support": [
        452.43662867860814,
        451.5879059434528
      ],
      "selected_paths": [
        [
          "PGa7cbf18c9ac92ff3a8478e8df6c52da543b074ac92cdc78c751473128bcb249d#0#HLA_DQB1"
        ],
        [
          "PG1efefcffc67e0bfd2553b3aa7db04ee211eaf8dc38e2d9444fd6672c5ba45b82#0#HLA_DQB1",
          "PG7b16009edbc9c6493e83cee3f7df53eef25b51a368bb9b21a3d46d7ef96f8eae#0#HLA_DQB1"
        ]
      ]
    },
    "DQB2": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          401,
          404
        ]
      ],
      "score_gap": 23.685943784512347,
      "distinct_support": [
        58.0,
        46.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-DQB2*01:07:01:04"
        ],
        [
          "IPD:HLA-DQB2*01:01:01:01"
        ]
      ]
    },
    "DRA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          436,
          439
        ]
      ],
      "score_gap": 8.31734036889975
    },
    "DRB1": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          466,
          468
        ]
      ],
      "score_gap": 21.57944554882124,
      "distinct_support": [
        1016.3179871171399,
        818.7602885046871
      ],
      "selected_paths": [
        [
          "PGa2ff6dda1dcdfa4d4bfdc6c8d7c79f616f78c1c79ae5c735a182b8e301bfb42c#0#HLA_DRB1"
        ],
        [
          "PG8156b86d96c1ad73e2ff264d5e52238b6f0a7798a82dcd92d05e5d8bafe70d2a#0#HLA_DRB1"
        ]
      ]
    },
    "DRB3": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          500,
          505
        ]
      ],
      "score_gap": 4.220190680105588
    },
    "DRB4": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          532,
          533
        ]
      ],
      "score_gap": 1.3792882427806035
    },
    "DRB5": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          535,
          547
        ]
      ],
      "score_gap": 58.57546474025003,
      "distinct_support": [
        71.98637474995677,
        24.336512096191868
      ],
      "selected_paths": [
        [
          "IPD:HLA-DRB5*01:01:01:02"
        ],
        [
          "IPD:HLA-DRB5*01:01:01:18"
        ]
      ]
    },
    "E": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          568,
          571
        ]
      ],
      "score_gap": 1.3862026327988133
    },
    "F": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          599,
          600
        ]
      ],
      "score_gap": 39.33169816820009,
      "distinct_support": [
        165.96738281094022,
        162.6561133814147
      ],
      "selected_paths": [
        [
          "IPD:HLA-F*01:01:02:09"
        ],
        [
          "IPD:HLA-F*01:01:01:01"
        ]
      ]
    },
    "G": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          631,
          663
        ]
      ],
      "score_gap": 8.90636840875959
    },
    "H": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          664,
          672
        ]
      ],
      "score_gap": 18.08945005334681,
      "distinct_support": [
        190.63832484089414,
        159.57725656217636
      ],
      "selected_paths": [
        [
          "IPD:HLA-H*02:07:01:01"
        ],
        [
          "IPD:HLA-H*01:01:01:01"
        ]
      ]
    },
    "J": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          696,
          698
        ]
      ],
      "score_gap": 17.327244604675798,
      "distinct_support": [
        66.73816833122099,
        55.8269588758175
      ],
      "selected_paths": [
        [
          "IPD:HLA-J*01:01:01:05"
        ],
        [
          "IPD:HLA-J*01:01:01:02"
        ]
      ]
    },
    "K": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          728,
          729
        ]
      ],
      "score_gap": 172.03126810224785,
      "distinct_support": [
        225.0,
        46.98527962408946
      ],
      "selected_paths": [
        [
          "IPD:HLA-K*01:02"
        ],
        [
          "IPD:HLA-K*01:01:01:01"
        ]
      ]
    },
    "L": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          735,
          735
        ]
      ],
      "score_gap": 127.93560657836497,
      "distinct_support": [
        445.9990671324217,
        445.9990671324217
      ],
      "selected_paths": [
        [
          "IPD:HLA-L*01:03"
        ],
        [
          "IPD:HLA-L*01:03"
        ]
      ]
    },
    "MICA": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          739,
          741
        ]
      ],
      "score_gap": 2.7720501308649546
    },
    "MICB": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          772,
          773
        ]
      ],
      "score_gap": 21.904139361082343,
      "distinct_support": [
        43.497882080998785,
        43.12528646268845
      ],
      "selected_paths": [
        [
          "IPD:MICB*005:02:09"
        ],
        [
          "IPD:MICB*002:01:37"
        ]
      ]
    },
    "N": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          803,
          803
        ]
      ],
      "score_gap": 3.4248613893723814
    },
    "P": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          807,
          808
        ]
      ],
      "score_gap": 196.11034363144427,
      "distinct_support": [
        98.0,
        30.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-P*02:01:01:01"
        ],
        [
          "IPD:HLA-P*02:01:01:02"
        ]
      ]
    },
    "S": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          811,
          812
        ]
      ],
      "score_gap": 36.37169159390032,
      "distinct_support": [
        18.0,
        14.999999999736099
      ],
      "selected_paths": [
        [
          "IPD:HLA-S*01:03"
        ],
        [
          "IPD:HLA-S*01:02:01:03"
        ]
      ]
    },
    "T": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          816,
          818
        ]
      ],
      "score_gap": 25.93877194239758,
      "distinct_support": [
        131.0,
        107.99772107100573
      ],
      "selected_paths": [
        [
          "IPD:HLA-T*03:01:01:01"
        ],
        [
          "IPD:HLA-T*01:01:01:05"
        ]
      ]
    },
    "TAP1": {
      "reason": "insufficient_sequence_pair_gap",
      "pairs": [
        [
          825,
          826
        ]
      ],
      "score_gap": 4.851641270710388
    },
    "TAP2": {
      "reason": "tied_sequence_pairs",
      "pairs": [
        [
          843,
          847
        ],
        [
          844,
          848
        ]
      ],
      "score_gap": 29.747456314609735
    },
    "U": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          874,
          875
        ]
      ],
      "score_gap": 122.455596262982,
      "distinct_support": [
        24.0,
        20.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-U*01:03"
        ],
        [
          "IPD:HLA-U*01:05"
        ]
      ]
    },
    "V": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          876,
          876
        ]
      ],
      "score_gap": 10.395624415279599,
      "distinct_support": [
        199.0,
        199.0
      ],
      "selected_paths": [
        [
          "IPD:HLA-V*01:01:01:01"
        ],
        [
          "IPD:HLA-V*01:01:01:01"
        ]
      ]
    },
    "W": {
      "reason": "sequence_pair_selected",
      "pairs": [
        [
          878,
          880
        ]
      ],
      "score_gap": 35.399911728542065,
      "distinct_support": [
        128.95200972318906,
        115.64930101399979
      ],
      "selected_paths": [
        [
          "IPD:HLA-W*05:02"
        ],
        [
          "IPD:HLA-W*03:01:01:01"
        ]
      ]
    }
  },
  "candidate_audit": {
    "A": {
      "observed_paths": 3959,
      "evidence_groups": 2130,
      "retained_groups": 33,
      "retained_paths": 49,
      "cutoff": 180.5078209289677
    },
    "B": {
      "observed_paths": 4985,
      "evidence_groups": 1601,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 177.73236585569686
    },
    "C": {
      "observed_paths": 5260,
      "evidence_groups": 2037,
      "retained_groups": 32,
      "retained_paths": 50,
      "cutoff": 205.76051558243546
    },
    "DMA": {
      "observed_paths": 106,
      "evidence_groups": 106,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 414.64482887164104
    },
    "DMB": {
      "observed_paths": 163,
      "evidence_groups": 162,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 643.9042054337951
    },
    "DOA": {
      "observed_paths": 167,
      "evidence_groups": 167,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 244.68540715200672
    },
    "DOB": {
      "observed_paths": 125,
      "evidence_groups": 124,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 310.3350245255795
    },
    "DPA1": {
      "observed_paths": 748,
      "evidence_groups": 664,
      "retained_groups": 35,
      "retained_paths": 44,
      "cutoff": 582.2920038139589
    },
    "DPA2": {
      "observed_paths": 6,
      "evidence_groups": 6,
      "retained_groups": 6,
      "retained_paths": 6,
      "cutoff": 176.67225196549884
    },
    "DPB1": {
      "observed_paths": 1845,
      "evidence_groups": 1310,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 691.4455137553432
    },
    "DPB2": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 8.25025025025025
    },
    "DQA1": {
      "observed_paths": 344,
      "evidence_groups": 274,
      "retained_groups": 32,
      "retained_paths": 37,
      "cutoff": 395.61241460822276
    },
    "DQA2": {
      "observed_paths": 42,
      "evidence_groups": 41,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 69.80473646242108
    },
    "DQB1": {
      "observed_paths": 779,
      "evidence_groups": 556,
      "retained_groups": 32,
      "retained_paths": 36,
      "cutoff": 420.5588449541881
    },
    "DQB2": {
      "observed_paths": 40,
      "evidence_groups": 38,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 153.0
    },
    "DRA": {
      "observed_paths": 128,
      "evidence_groups": 119,
      "retained_groups": 33,
      "retained_paths": 33,
      "cutoff": 461.20494481193856
    },
    "DRB1": {
      "observed_paths": 1084,
      "evidence_groups": 451,
      "retained_groups": 34,
      "retained_paths": 38,
      "cutoff": 736.1217700522842
    },
    "DRB3": {
      "observed_paths": 308,
      "evidence_groups": 212,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 699.4586826265404
    },
    "DRB4": {
      "observed_paths": 127,
      "evidence_groups": 8,
      "retained_groups": 3,
      "retained_paths": 84,
      "cutoff": 1.0
    },
    "DRB5": {
      "observed_paths": 73,
      "evidence_groups": 61,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 696.8161335235175
    },
    "E": {
      "observed_paths": 381,
      "evidence_groups": 316,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 389.69087652583704
    },
    "F": {
      "observed_paths": 139,
      "evidence_groups": 132,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 194.69231591638132
    },
    "G": {
      "observed_paths": 184,
      "evidence_groups": 166,
      "retained_groups": 33,
      "retained_paths": 36,
      "cutoff": 146.9817219633239
    },
    "H": {
      "observed_paths": 105,
      "evidence_groups": 93,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 117.92775109820508
    },
    "J": {
      "observed_paths": 34,
      "evidence_groups": 33,
      "retained_groups": 32,
      "retained_paths": 33,
      "cutoff": 46.66163854046274
    },
    "K": {
      "observed_paths": 7,
      "evidence_groups": 7,
      "retained_groups": 7,
      "retained_paths": 7,
      "cutoff": 19.0
    },
    "L": {
      "observed_paths": 6,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 6,
      "cutoff": 20.95763009278151
    },
    "MICA": {
      "observed_paths": 408,
      "evidence_groups": 247,
      "retained_groups": 32,
      "retained_paths": 34,
      "cutoff": 112.853420320562
    },
    "MICB": {
      "observed_paths": 112,
      "evidence_groups": 92,
      "retained_groups": 32,
      "retained_paths": 41,
      "cutoff": 103.16919547820419
    },
    "N": {
      "observed_paths": 4,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 4,
      "cutoff": 5.0
    },
    "P": {
      "observed_paths": 5,
      "evidence_groups": 4,
      "retained_groups": 4,
      "retained_paths": 5,
      "cutoff": 11.0
    },
    "S": {
      "observed_paths": 5,
      "evidence_groups": 5,
      "retained_groups": 5,
      "retained_paths": 5,
      "cutoff": 11.0
    },
    "T": {
      "observed_paths": 9,
      "evidence_groups": 9,
      "retained_groups": 9,
      "retained_paths": 9,
      "cutoff": 12.0
    },
    "TAP1": {
      "observed_paths": 17,
      "evidence_groups": 17,
      "retained_groups": 17,
      "retained_paths": 17,
      "cutoff": 234.0
    },
    "TAP2": {
      "observed_paths": 85,
      "evidence_groups": 84,
      "retained_groups": 32,
      "retained_paths": 32,
      "cutoff": 285.8180141617575
    },
    "U": {
      "observed_paths": 2,
      "evidence_groups": 2,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 20.0
    },
    "V": {
      "observed_paths": 4,
      "evidence_groups": 3,
      "retained_groups": 2,
      "retained_paths": 2,
      "cutoff": 2.9316814268688436
    },
    "W": {
      "observed_paths": 13,
      "evidence_groups": 13,
      "retained_groups": 13,
      "retained_paths": 13,
      "cutoff": 3.0
    }
  },
  "fit": {
    "converged": true,
    "iterations": 3,
    "genes": {
      "A": {
        "pairs": [
          [
            0,
            1
          ]
        ],
        "gene_fraction": 0.020076414827717003,
        "score_gap": 0.6930974725983106
      },
      "B": {
        "pairs": [
          [
            33,
            34
          ]
        ],
        "gene_fraction": 0.021753315955670777,
        "score_gap": 168.37112914204772
      },
      "C": {
        "pairs": [
          [
            65,
            67
          ]
        ],
        "gene_fraction": 0.0251692916806777,
        "score_gap": 9.440311224607285
      },
      "DMA": {
        "pairs": [
          [
            97,
            97
          ]
        ],
        "gene_fraction": 0.02780043048943818,
        "score_gap": 15.978307311408571
      },
      "DMB": {
        "pairs": [
          [
            129,
            129
          ]
        ],
        "gene_fraction": 0.03560768612500763,
        "score_gap": 11.783022007381078
      },
      "DOA": {
        "pairs": [
          [
            161,
            165
          ]
        ],
        "gene_fraction": 0.020373278031258393,
        "score_gap": 46.12870402536646
      },
      "DOB": {
        "pairs": [
          [
            193,
            197
          ]
        ],
        "gene_fraction": 0.0248482737069002,
        "score_gap": 28.975534534751205
      },
      "DPA1": {
        "pairs": [
          [
            225,
            257
          ]
        ],
        "gene_fraction": 0.057314572515816155,
        "score_gap": 65.252518259309
      },
      "DPA2": {
        "pairs": [
          [
            260,
            261
          ]
        ],
        "gene_fraction": 0.036654925229634025,
        "score_gap": 28.41791590763023
      },
      "DPB1": {
        "pairs": [
          [
            266,
            269
          ]
        ],
        "gene_fraction": 0.06293215142432569,
        "score_gap": 66.93479902975378
      },
      "DPB2": {
        "pairs": [
          [
            298,
            299
          ]
        ],
        "gene_fraction": 0.09229889720590087,
        "score_gap": 761.753696628497
      },
      "DQA1": {
        "pairs": [
          [
            305,
            307
          ]
        ],
        "gene_fraction": 0.035940122023298084,
        "score_gap": 117.50067078562279
      },
      "DQA2": {
        "pairs": [
          [
            337,
            339
          ]
        ],
        "gene_fraction": 0.028226042037253315,
        "score_gap": 83.33730446377012
      },
      "DQB1": {
        "pairs": [
          [
            369,
            370
          ]
        ],
        "gene_fraction": 0.04374711863674666,
        "score_gap": 19.98058043673518
      },
      "DQB2": {
        "pairs": [
          [
            401,
            404
          ]
        ],
        "gene_fraction": 0.04051090037595703,
        "score_gap": 23.685943784512347
      },
      "DRA": {
        "pairs": [
          [
            436,
            439
          ]
        ],
        "gene_fraction": 0.028180917128563923,
        "score_gap": 8.31734036889975
      },
      "DRB1": {
        "pairs": [
          [
            466,
            468
          ]
        ],
        "gene_fraction": 0.08815271086966608,
        "score_gap": 21.57944554882124
      },
      "DRB3": {
        "pairs": [
          [
            500,
            505
          ]
        ],
        "gene_fraction": 0.03670256408233376,
        "score_gap": 4.220190680105588
      },
      "DRB4": {
        "pairs": [
          [
            532,
            533
          ]
        ],
        "gene_fraction": 0.00028396535075511414,
        "score_gap": 1.3792882427806035
      },
      "DRB5": {
        "pairs": [
          [
            535,
            547
          ]
        ],
        "gene_fraction": 0.03908274675024695,
        "score_gap": 58.57546474025003
      },
      "E": {
        "pairs": [
          [
            568,
            571
          ]
        ],
        "gene_fraction": 0.021802036294091515,
        "score_gap": 1.3862026327988133
      },
      "F": {
        "pairs": [
          [
            599,
            600
          ]
        ],
        "gene_fraction": 0.01865938598269867,
        "score_gap": 39.33169816820009
      },
      "G": {
        "pairs": [
          [
            631,
            663
          ]
        ],
        "gene_fraction": 0.01475564583524576,
        "score_gap": 8.90636840875959
      },
      "H": {
        "pairs": [
          [
            664,
            672
          ]
        ],
        "gene_fraction": 0.01694545928880655,
        "score_gap": 18.08945005334681
      },
      "J": {
        "pairs": [
          [
            696,
            698
          ]
        ],
        "gene_fraction": 0.017755403193489467,
        "score_gap": 17.327244604675798
      },
      "K": {
        "pairs": [
          [
            728,
            729
          ]
        ],
        "gene_fraction": 0.01351791821311801,
        "score_gap": 172.03126810224785
      },
      "L": {
        "pairs": [
          [
            735,
            735
          ]
        ],
        "gene_fraction": 0.021230918039233684,
        "score_gap": 127.93560657836497
      },
      "MICA": {
        "pairs": [
          [
            739,
            741
          ]
        ],
        "gene_fraction": 0.007425288051042505,
        "score_gap": 2.7720501308649546
      },
      "MICB": {
        "pairs": [
          [
            772,
            773
          ]
        ],
        "gene_fraction": 0.00900684832810712,
        "score_gap": 21.904139361082343
      },
      "N": {
        "pairs": [
          [
            803,
            803
          ]
        ],
        "gene_fraction": 0.0006654711971510487,
        "score_gap": 3.4248613893723814
      },
      "P": {
        "pairs": [
          [
            807,
            808
          ]
        ],
        "gene_fraction": 0.013280391311625847,
        "score_gap": 196.11034363144427
      },
      "S": {
        "pairs": [
          [
            811,
            812
          ]
        ],
        "gene_fraction": 0.0019023829716477477,
        "score_gap": 36.37169159390032
      },
      "T": {
        "pairs": [
          [
            816,
            818
          ]
        ],
        "gene_fraction": 0.011375642158446391,
        "score_gap": 25.93877194239758
      },
      "TAP1": {
        "pairs": [
          [
            825,
            826
          ]
        ],
        "gene_fraction": 0.01799369065224216,
        "score_gap": 4.851641270710388
      },
      "TAP2": {
        "pairs": [
          [
            843,
            847
          ],
          [
            844,
            848
          ]
        ],
        "gene_fraction": 0.022515646997757502,
        "score_gap": 29.747456314609735
      },
      "U": {
        "pairs": [
          [
            874,
            875
          ]
        ],
        "gene_fraction": 0.002092628685358936,
        "score_gap": 122.455596262982
      },
      "V": {
        "pairs": [
          [
            876,
            876
          ]
        ],
        "gene_fraction": 0.009472434282425526,
        "score_gap": 10.395624415279599
      },
      "W": {
        "pairs": [
          [
            878,
            880
          ]
        ],
        "gene_fraction": 0.013946484070344076,
        "score_gap": 35.399911728542065
      }
    },
    "unassigned_fragments": 1082,
    "objective_trace": [
      -113647.97951203775,
      -113647.9784971236,
      -113647.97849711467
    ],
    "limitations": "Coordinate-ascent local solution; score gaps are not calibrated confidence. Candidate completeness and all-IPD fallback are caller responsibilities."
  },
  "limitations": "Candidate-limited coordinate ascent; score gaps are uncalibrated; tied groups preserve label uncertainty."
}